Clone BS15344 Report

Search the DGRC for BS15344

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG32021-RA
Protein status:BS15344.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15344.3prime Sequence

384 bp (384 high quality bases) assembled on 2006-10-24

> BS15344.3prime
ATGGTCTAGAAAGCTTCTACCGCCGATCCCATGGCAGGCAATGCAGCAAC
TGCCCATGCAGCAGCAGCCTCCCCCACGTCAACACCCACATCCTCATCGG
GATCCGCATCACCAATATCCGCACCAGATGCCGATCTCGAGCCACGCATG
TACTGTACCGAAGAAAACGGCTTACGAAAGCGAACGTAAGCCCGGTGGAT
CCACGGCGCATCTTTAAGGCCCTACGATCTGGTCTGCCCGGCCTGTTAAT
TTTGCTGATGGAACACTTTCTCGCCGAGATGTTCGGCAAACAAAAAACGA
GGAGCAGTCCGCTCAGCTGGCGGAAGATGCTGATGGCGACATCATCAGAA
GTTACAACCGCAGCCGGCATGTCGACTGATAACT

BS15344.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG32021-PA 354 CG32021-RA 1..354 370..17 1745 99.7 Minus
CG7467-PC 7671 osa-RC 5120..5156 294..330 160 97.2 Plus
CG7467-PA 8112 osa-RA 5561..5597 294..330 160 97.2 Plus
CG7467-PB 8151 osa-RB 5600..5636 294..330 160 97.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..773 370..17 1755 99.7 Minus
osa-RF 10243 CG7467-RF 5222..5336 19..133 290 83.5 Plus
osa-RE 9940 CG7467-RE 4919..5033 19..133 290 83.5 Plus
osa-RF 10243 CG7467-RF 5443..5538 142..237 255 84.4 Plus
osa-RF 10243 CG7467-RF 5666..5738 269..340 220 87.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:37:42
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907334..907554 17..237 1105 100 Plus
4 1348131 4 907620..907756 234..370 670 99.3 Plus
3R 32079331 3R 2925169..2925306 370..234 340 84.8 Minus
3R 32079331 3R 2996823..2996960 234..370 340 84.8 Plus
3R 32079331 3R 17692725..17692839 133..19 290 83.5 Minus
2R 25286936 2R 1247305..1247434 242..371 270 84 Plus
3R 32079331 3R 17692523..17692618 237..142 255 84.4 Minus
3R 32079331 3R 3344376..3344501 363..239 250 81.7 Minus
3R 32079331 3R 3467361..3467455 144..238 250 84.2 Plus
3R 32079331 3R 3519179..3519265 106..20 225 83.9 Minus
3R 32079331 3R 3467179..3467251 20..92 200 84.9 Plus
3R 32079331 3R 17692323..17692395 340..269 195 87.7 Minus
3R 32079331 3R 3344679..3344794 133..17 190 79.5 Minus
Blast to na_te.dros performed 2015-02-10 16:37:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6962 12..176 133 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 44..127 132 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 34..126 123 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 43..126 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 44..126 118 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 43..89 109 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 43..90 105 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 42..96 104 65.5 Plus

BS15344.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:24:13 Download gff for BS15344.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..370 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:00:08 Download gff for BS15344.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..370 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-15 06:30:47 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:16 Download gff for BS15344.3prime
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 415..783 4..379 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:16 Download gff for BS15344.3prime
Subject Subject Range Query Range Percent Splice Strand
4 907324..907550 4..233 97 <- Plus
4 907620..907761 234..379 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:30:47 Download gff for BS15344.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 927950..928176 4..233 97 <- Plus
arm_4 928246..928387 234..379 96   Plus

BS15344.5prime Sequence

384 bp (384 high quality bases) assembled on 2006-10-24

> BS15344.5prime
GAAGTTATCAGTCGACATGCCGGCTGCGGTTGTAACTTCTGATGATGTCG
CCATCAGCATCTTCCGCCAGCTGAGCGGACTGCTCCTCGTTTTTTGTTTG
CCGAACATCTCGGCGAGAAAGTGTTCCATCAGCAAAATTAACAGGCCGGG
CAGACCAGATCGTAGGGCCTTAAAGATGCGCCGTGGATCCACCGGGCTTA
CGTTCGCTTTCGTAAGCCGTTTTCTTCGGTACAGTACATGCGTGGCTCGA
GATCGGCATCTGGTGCGGATATTGGTGATGCGGATCCCGATGAGGATGTG
GGTGTTGACGTGGGGGAGGCTGCTGCTGCATGGGCAGTTGCTGCATTGCC
TGCCATGGGATCGGCGGTAGAAGCTTTCTAGACC

BS15344.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32021-PA 354 CG32021-RA 1..354 17..370 1745 99.7 Plus
CG7467-PC 7671 osa-RC 5120..5156 93..57 160 97.2 Minus
CG7467-PA 8112 osa-RA 5561..5597 93..57 160 97.2 Minus
CG7467-PB 8151 osa-RB 5600..5636 93..57 160 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..773 17..370 1755 99.7 Plus
osa-RF 10243 CG7467-RF 5222..5336 368..254 290 83.5 Minus
osa-RE 9940 CG7467-RE 4919..5033 368..254 290 83.5 Minus
osa-RF 10243 CG7467-RF 5443..5538 245..150 255 84.4 Minus
osa-RF 10243 CG7467-RF 5666..5738 118..47 220 87.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:32:18
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907334..907554 370..150 1105 100 Minus
4 1348131 4 907620..907756 153..17 670 99.3 Minus
3R 32079331 3R 2925169..2925306 17..153 340 84.8 Plus
3R 32079331 3R 2996823..2996960 153..17 340 84.8 Minus
3R 32079331 3R 17692725..17692839 254..368 290 83.5 Plus
2R 25286936 2R 1247305..1247434 145..16 270 84 Minus
3R 32079331 3R 17692523..17692618 150..245 255 84.4 Plus
3R 32079331 3R 3344376..3344501 24..148 250 81.7 Plus
3R 32079331 3R 3467361..3467455 243..149 250 84.2 Minus
3R 32079331 3R 3519179..3519265 281..367 225 83.9 Plus
3R 32079331 3R 3467179..3467251 367..295 200 84.9 Minus
3R 32079331 3R 17692323..17692395 47..118 195 87.7 Plus
3R 32079331 3R 3344679..3344794 254..370 190 79.5 Plus
Blast to na_te.dros performed 2015-02-11 03:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6962 375..211 133 55.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 343..260 132 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 353..261 123 59.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 344..261 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 343..261 118 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 344..298 109 70.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 344..297 105 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 345..291 104 65.5 Minus

BS15344.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:24:14 Download gff for BS15344.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..370 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:00:10 Download gff for BS15344.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32021-PA 1..354 17..370 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-22 21:06:02 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:35:21 Download gff for BS15344.5prime
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 415..783 8..383 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:35:21 Download gff for BS15344.5prime
Subject Subject Range Query Range Percent Splice Strand
4 907324..907550 154..383 97 <- Minus
4 907620..907761 8..153 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:06:02 Download gff for BS15344.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_4 927950..928176 154..383 97 <- Minus
arm_4 928246..928387 8..153 96   Minus

BS15344.complete Sequence

386 bp assembled on 2006-11-01

GenBank Submission: FJ637922

> BS15344.complete
GAAGTTATCAGTCGACATGCCGGCTGCGGTTGTAACTTCTGATGATGTCG
CCATCAGCATCTTCCGCCAGCTGAGCGGACTGCTCCTCGTTTTTTGTTTG
CCGAACATCTCGGCGAGAAAGTGTTCCATCAGCAAAATTAACAGGCCGGG
CAGACCAGATCGTAGGGCCTTAAAGATGCGCCGTGGATCCACCGGGCTTA
CGTTCGCTTTCGTAAGCCGTTTTCTTCGGTACAGTACATGCGTGGCTCGA
GATCGGCATCTGGTGCGGATATTGGTGATGCGGATCCCGATGAGGATGTG
GGTGTTGACGTGGGGGAGGCTGCTGCTGCATGGGCAGTTGCTGCATTGCC
TGCCATGGGATCGGCGGTAGAAGCTTTCTAGACCAT

BS15344.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 13:08:42 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
unc-13-RG 12914 CG2999-RG 420..773 17..370 1755 99.7 Plus
osa-RF 10243 CG7467-RF 5222..5336 368..254 290 83.5 Minus
osa-RE 9940 CG7467-RE 4919..5033 368..254 290 83.5 Minus
osa-RF 10243 CG7467-RF 5443..5538 245..150 255 84.4 Minus
osa-RF 10243 CG7467-RF 5666..5738 118..47 195 87.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 907334..907554 370..150 1105 100 Minus
4 1348131 4 907620..907756 153..17 670 99.3 Minus
3R 32079331 3R 2925169..2925306 17..153 340 84.8 Plus
3R 32079331 3R 2996823..2996960 153..17 340 84.8 Minus
3R 32079331 3R 17692725..17692839 254..368 290 83.5 Plus
2R 25286936 2R 1247305..1247434 145..16 270 84 Minus
3R 32079331 3R 17692523..17692618 150..245 255 84.4 Plus
3R 32079331 3R 3344376..3344501 24..148 250 81.7 Plus
3R 32079331 3R 3467361..3467455 243..149 250 84.2 Minus
2R 25286936 2R 1459668..1459774 153..48 230 83.2 Minus
3R 32079331 3R 3519179..3519265 281..367 225 83.9 Plus
2L 23513712 2L 22340894..22340988 244..150 220 82.1 Minus
3R 32079331 3R 3467179..3467251 367..295 200 84.9 Minus
3R 32079331 3R 17692323..17692395 47..118 195 87.7 Plus
3R 32079331 3R 3344679..3344794 254..370 190 79.5 Plus
2R 25286936 2R 4329414..4329458 65..21 180 93.3 Minus
Blast to na_te.dros performed 2014-11-27 13:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6801..6962 375..211 133 55.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2417 343..260 132 61.9 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2419 353..261 123 59.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2441..2524 344..261 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2340..2422 343..261 118 60.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2828..2874 344..298 109 70.2 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2618..2665 344..297 105 68.8 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2485..2539 345..291 104 65.5 Minus

BS15344.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:49 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 1..354 17..370 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:20 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 270..638 8..383 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 11:59:30 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:49 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
CG32021-RA 270..638 8..383 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:11:51 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
unc-13-RG 420..773 17..370 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:11:51 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
4 907334..907550 154..370 100 <- Minus
4 907620..907756 17..153 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:59:30 Download gff for BS15344.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 927960..928176 154..370 100 <- Minus
arm_4 928246..928382 17..153 99   Minus

BS15344.pep Sequence

Translation from 16 to 369

> BS15344.pep
MPAAVVTSDDVAISIFRQLSGLLLVFCLPNISARKCSISKINRPGRPDRR
ALKMRRGSTGLTFAFVSRFLRYSTCVARDRHLVRILVMRIPMRMWVLTWG
RLLLHGQLLHCLPWDRR*
Sequence BS15344.pep has no blast hits.