Clone BS15360 Report

Search the DGRC for BS15360

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:60
Vector:pDNR-Dual
Associated Gene/TranscriptCG14544-RA
Protein status:BS15360.pep: full length peptide match
Sequenced Size:986

Clone Sequence Records

BS15360.3prime Sequence

740 bp (698 high quality bases) assembled on 2006-10-24

> BS15360.3prime
ATGGTCTAGAAAGCTTTCAGGCCTTGGGTATATTTGGTGGCAAAGTGGCG
AAGGTGAGGAAGCCCGTGTGACCGGGCAGGGTTTGGGGATTACTGGAGGT
CAGGTACTTCTTCACCTCCTTTGGCGCCTTGCTCTCCAAGGCATTTGTTG
CCGCCGTCGTCTCATCGGTTTTGGGCAATTTAAGGAACTCAAGATCGATG
ACGGGCAGCGTGCGCGTCTTCACCACGTTCTCCTGCTGCAGCACCTCCAA
GGAAACAATCTCGTTGAAGCCCAGCTTGGTTAGCTCTTGGATGCAGCGCT
GCGACTGCTCAATGCAGGGCGAAAACGAACAGAAACGACCTCCGGACAGC
TTCAACGCCTTGAAGGCGTGCGGCACAGCGAGATCGGGCGCGGGCAGATC
CAAGAAGACCGCATCGGCCTTTCCGTCCAGTTCCGCACCAAAGCCCAGAT
TGCAAACGTCCCGGTGATAGACGGTGACGAAGTCAGCGATACCATGTCGC
CGGAACTCGTCGCGTGCCTGATCCGCTCGAGCTTCGTGGAAATCGAAGGT
GTGCAGGTGGCCAGTGGGTTTCAGTGCTCTTAGAAAGTAATGCGATAGAG
ACCCCGATCCCGTGCCCGACTCAACCACCACGGCACCGGGTCGGACCTCC
AGCTGGTGGATAATCATACTAATATCCGGCGTGTAAATAATCTGTGTGCG
GGGGGGCAGTGTTTGTGTCCAGAGTTCCGGCGTCGGCTGA

BS15360.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PA 954 CG14544-RA 231..954 740..17 3595 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 303..1026 740..17 3605 99.9 Minus
CG14544-RA 1069 CG14544-RA 315..1038 740..17 3605 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059864..26060262 740..342 1980 99.7 Minus
3R 32079331 3R 26060936..26061262 343..17 1635 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:55:29 has no hits.

BS15360.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:24:48 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 232..954 17..739 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:00:52 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 232..954 17..739 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:54:31 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 316..1038 17..739 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:15 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 316..1038 17..739 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:15 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 26059865..26060261 343..739 99 -> Minus
3R 26060937..26061258 21..342 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:54:31 Download gff for BS15360.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21886659..21886980 21..342 100 <- Minus
arm_3R 21885587..21885983 343..739 99 -> Minus

BS15360.5prime Sequence

823 bp (682 high quality bases) assembled on 2006-10-24

> BS15360.5prime
GAAGTTACCTTTCGAGGTGAGTTTTCTGAAACCCAAGACCCACATAGAAA
AGGGCGATGTGGTCATCCTTTATTTGAGTGTCACTTCCGTGCATGCCATC
GAAGCGGTGCCCGAAATAGTGAACAAAAAGGGCGAAACAATACCGCATAT
TTTTCAGACCAATTATGGATCGCTAAAAGTTGAAAATATCATCGGCGTGG
AGTATGGTAGTAAAGTGGAGCTCTCCAAGGGCTGGGCCCATGTCCTTCAG
CCGACGCCGGAACTCTGGACACAAACACTGCCCCACCGCACACAGATTAT
TTACACGCCGGATATTAGTATGATTATCCACCAGCTGGAGGTCCGACCCG
GTGCCGTGGTGGTTGAGTCGGGCACGGGATCGGGGTCTCTATCGCATTAC
TTTCTAAGAGCACTGAAACCCACTGGCCACCTGCACACCTTCGATTTCCA
CGAAGCTCGAGCGGATCAGGCACGCGACGAGTTCCGGCGACATGGTATCG
CTGACTTCGTCACCGTCTATCACCGGGACGTTTGCAATCTGGGCTTTGGT
GCGGAACTGGACGGAAAGGCCGATGCGGTCTTCTTGGATCTGCCCGCGCC
CGATCTCGCTGTGCCGCACGCCTTCAAGGCGTTGAAGCTGTCCGGAGGTC
GTTTCTGTTCGTTTTCGCCCTGCATTGAGCAGTCGCAGCGCTGCATCCAA
GAGCTAACCAAGCTGGGCTTCAACGAGATTGTTTCCTTGGAGGTGCTGCA
GCAGGAGAACGTGGTGAAGACGCGCACGCTGCCCGTCATCGATCTTGAGT
TCCTTAATTGCCCAAAACCGATG

BS15360.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PA 954 CG14544-RA 2..791 18..807 3900 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 74..880 18..823 3980 99.6 Plus
CG14544-RA 1069 CG14544-RA 86..892 18..823 3980 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:08:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059803..26060262 186..645 2300 100 Plus
3R 32079331 3R 26060936..26061116 644..823 855 99.4 Plus
3R 32079331 3R 26059581..26059748 18..185 810 98.8 Plus
Blast to na_te.dros performed on 2015-02-13 07:08:34 has no hits.

BS15360.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:24:49 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 2..808 18..823 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:00:53 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-PA 2..808 18..823 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:51:05 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 86..892 18..823 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:29:06 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 86..892 18..823 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:29:06 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26059581..26059748 18..185 98 -> Plus
3R 26059803..26060261 186..644 100 -> Plus
3R 26060937..26061116 645..823 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:51:05 Download gff for BS15360.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21885303..21885470 18..185 98 -> Plus
arm_3R 21885525..21885983 186..644 100 -> Plus
arm_3R 21886659..21886838 645..823 99   Plus

BS15360.complete Sequence

986 bp assembled on 2009-08-24

GenBank Submission: KX806512

> BS15360.complete
GAAGTTATCAGTCGACATGAGTTTTCTGAAACCCAAGACCCACATAGAAA
AGGGCGATGTGGTCATCCTTTATTTGAGTGTCAGTTCCATGCATGCCATC
GAAGCGGTGCCCGAAATAGTGAACAAAAAGGGCGAAACAATACCGCATAT
TTTTCAGACCAATTATGGATCGCTAAAAGTTGAAAATATCATCGGCGTGG
AGTATGGTAGTAAAGTGGAGCTCTCCAAGGGCTGGGCCCATGTCCTTCAG
CCGACGCCGGAACTCTGGACACAAACACTGCCCCACCGCACACAGATTAT
TTACACGCCGGATATTAGTATGATTATCCACCAGCTGGAGGTCCGACCCG
GTGCCGTGGTGGTTGAGTCGGGCACGGGATCGGGGTCTCTATCGCATTAC
TTTCTAAGAGCACTGAAACCCACTGGCCACCTGCACACCTTCGATTTCCA
CGAAGCTCGAGCGGATCAGGCACGCGACGAGTTCCGGCGACATGGTATCG
CTGACTTCGTCACCGTCTATCACCGGGACGTTTGCAATCTGGGCTTTGGT
GCGGAACTGGACGGAAAGGCCGATGCGGTCTTCTTGGATCTGCCCGCGCC
CGATCTCGCTGTGCCGCACGCCTTCAAGGCGTTGAAGCTGTCCGGAGGTC
GTTTCTGTTCGTTTTCGCCCTGCATTGAGCAGTCGCAGCGCTGCATCCAA
GAGCTAACCAAGCTGGGCTTCAACGAGATTGTTTCCTTGGAGGTGCTGCA
GCAGGAGAACGTGGTGAAGACGCGCACGCTGCCCGTCATCGATCTTGAGT
TCCTTAAATTGCCCAAAACCGATGAGACGACGGCGGCAACAAATGCCTTG
GAGAGCAAGGCGCCAAAGGAGGTGAAGAAGTACCTGACCTCCAGTAATCC
CCAAACCCTGCCCGGTCACACGGGCTTCCTCACCTTCGCCACTTTGCCAC
CAAATATACCCAAGGCCTGAAAGCTTTCTAGACCAT

BS15360.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 954 CG14544-PB 1..954 17..970 4770 100 Plus
CG14544-RA 954 CG14544-PA 1..954 17..970 4770 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-RB 1031 CG14544-RB 71..1026 15..970 4780 100 Plus
CG14544-RA 1069 CG14544-RA 83..1038 15..970 4780 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26059803..26060262 186..645 2300 100 Plus
3R 32079331 3R 26060936..26061262 644..970 1635 100 Plus
3R 32079331 3R 26059578..26059748 15..185 855 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:36:37 has no hits.

BS15360.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:03:41 Download gff for BS15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 73..1025 17..969 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:52:36 Download gff for BS15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 85..1037 17..969 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:39 Download gff for BS15360.complete
Subject Subject Range Query Range Percent Splice Strand
CG14544-RA 85..1037 17..969 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:39 Download gff for BS15360.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26059580..26059748 17..185 100 -> Plus
3R 26059803..26060261 186..644 100 -> Plus
3R 26060937..26061261 645..969 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:52:36 Download gff for BS15360.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21885302..21885470 17..185 100 -> Plus
arm_3R 21885525..21885983 186..644 100 -> Plus
arm_3R 21886659..21886983 645..969 100   Plus

BS15360.pep Sequence

Translation from 16 to 969

> BS15360.pep
MSFLKPKTHIEKGDVVILYLSVSSMHAIEAVPEIVNKKGETIPHIFQTNY
GSLKVENIIGVEYGSKVELSKGWAHVLQPTPELWTQTLPHRTQIIYTPDI
SMIIHQLEVRPGAVVVESGTGSGSLSHYFLRALKPTGHLHTFDFHEARAD
QARDEFRRHGIADFVTVYHRDVCNLGFGAELDGKADAVFLDLPAPDLAVP
HAFKALKLSGGRFCSFSPCIEQSQRCIQELTKLGFNEIVSLEVLQQENVV
KTRTLPVIDLEFLKLPKTDETTAATNALESKAPKEVKKYLTSSNPQTLPG
HTGFLTFATLPPNIPKA*

BS15360.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:35:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG14544-PB 317 CG14544-PB 1..317 1..317 1651 100 Plus
CG14544-PA 317 CG14544-PA 1..317 1..317 1651 100 Plus