Clone BS15367 Report

Search the DGRC for BS15367

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7911-RA
Protein status:BS15367.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15367.3prime Sequence

501 bp (501 high quality bases) assembled on 2006-10-24

> BS15367.3prime
ATGGTCTAGAAAGCTTCTACTTCTTCTTATTACTCTTGCCGTTCGTCTGA
GGAGCTGCTTCTTCGTCGAATTCCAGTTCGCTATCCTCCTCCTCGTCCGA
ATACTCCTCGTAAATCTGACCGTCGTCAAACTCGCCAAAGTTCATCTCGA
CCTTGCCGCATACGTGTACGGGTCCACTTCCCTGCACCAGTTTGAAGGTC
ACTGATCCATTGGGGAACTCGACATTTGGTCTTAAGCTACGGGTCTCGCC
GACCTTCAACACGGCAATGGGGATCTTCAAGGTTTTCTTCTCGCCATCGT
CGTTTATGTTCGTCTCCGCCTGTACAACGTTGAATTCGCCGGTCTTCGCT
TCTGGGCCGAGGGAAATCTGTTTGATGATGAGCTTGTGCGAGTGGACGAT
GTACTCCTCGGGTACATCTGGGACCTCGAACTGTGCGATGGCCTCCTTCT
CGCTGAGTGTGACACCATAAAACGACTCGGACTCCATGTCGACTGATAAC
T

BS15367.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PA 471 CG7911-RA 1..471 487..17 2355 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..569 487..15 2365 100 Minus
CG7911-RA 818 CG7911-RA 259..731 487..15 2365 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 150..322 865 100 Plus
3R 32079331 3R 30004303..30004450 319..466 740 100 Plus
3R 32079331 3R 30003768..30003906 15..153 695 100 Plus
Blast to na_te.dros performed on 2015-02-12 16:08:59 has no hits.

BS15367.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:00 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 17..487 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:08 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 17..487 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:52 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..731 15..487 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:21:50 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..731 15..487 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:21:50 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 30003768..30003904 15..151 100 <- Plus
3R 30003990..30004157 152..319 100 <- Plus
3R 30004304..30004449 320..465 100 <- Plus
3R 30004582..30004603 466..487 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:52 Download gff for BS15367.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829490..25829626 15..151 100 <- Plus
arm_3R 25829712..25829879 152..319 100 <- Plus
arm_3R 25830026..25830171 320..465 100 <- Plus
arm_3R 25830304..25830325 466..487 100   Plus

BS15367.5prime Sequence

501 bp (501 high quality bases) assembled on 2006-10-24

> BS15367.5prime
GAAGTTATCATTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGTAGAAGCTTTCTAGAC
C

BS15367.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PA 471 CG7911-RA 1..471 17..487 2355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..569 17..489 2365 100 Plus
CG7911-RA 818 CG7911-RA 259..731 17..489 2365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 354..182 865 100 Minus
3R 32079331 3R 30004303..30004450 185..38 740 100 Minus
3R 32079331 3R 30003768..30003906 489..351 695 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:32:42 has no hits.

BS15367.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:01 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 17..487 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:09 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-PA 1..471 17..487 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:06:04 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..731 17..489 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:38:05 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..731 17..489 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:38:05 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 30003768..30003904 353..489 100 <- Minus
3R 30003990..30004157 185..352 100 <- Minus
3R 30004304..30004449 39..184 100 <- Minus
3R 30004582..30004603 17..38 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:06:04 Download gff for BS15367.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829490..25829626 353..489 100 <- Minus
arm_3R 25829712..25829879 185..352 100 <- Minus
arm_3R 25830026..25830171 39..184 100 <- Minus
arm_3R 25830304..25830325 17..38 100   Minus

BS15367.complete Sequence

503 bp assembled on 2006-11-01

GenBank Submission: FJ637926

> BS15367.complete
GAAGTTATCAGTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGTAGAAGCTTTCTAGAC
CAT

BS15367.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 471 CG7911-PB 1..471 17..487 2355 100 Plus
CG7911-RA 471 CG7911-PA 1..471 17..487 2355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-RB 656 CG7911-RB 97..569 17..489 2365 100 Plus
CG7911-RA 818 CG7911-RA 259..731 17..489 2365 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30003988..30004160 354..182 865 100 Minus
3R 32079331 3R 30004303..30004450 185..38 740 100 Minus
3R 32079331 3R 30003768..30003906 489..351 695 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:53:41 has no hits.

BS15367.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:35 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RB 1..471 17..487 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:18 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RB 79..551 17..489 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:54 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..729 17..487 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:35 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RB 79..551 17..489 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:23 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
CG7911-RA 259..729 17..487 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:23 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30003770..30003904 353..487 100 <- Minus
3R 30003990..30004157 185..352 100 <- Minus
3R 30004304..30004449 39..184 100 <- Minus
3R 30004582..30004603 17..38 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:54 Download gff for BS15367.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25829492..25829626 353..487 100 <- Minus
arm_3R 25829712..25829879 185..352 100 <- Minus
arm_3R 25830026..25830171 39..184 100 <- Minus
arm_3R 25830304..25830325 17..38 100   Minus

BS15367.pep Sequence

Translation from 16 to 486

> BS15367.pep
MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTG
EFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKL
VQGSGPVHVCGKVEMNFGEFDDGQIYEEYSDEEEDSELEFDEEAAPQTNG
KSNKKK*

BS15367.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG7911-PB 156 CG7911-PB 1..156 1..156 804 100 Plus
CG7911-PA 156 CG7911-PA 1..156 1..156 804 100 Plus
Nlp-PB 152 CG7917-PB 1..152 1..156 283 45.7 Plus
Nlp-PA 152 CG7917-PA 1..152 1..156 283 45.7 Plus