Clone Sequence Records
BS15367.3prime Sequence
501 bp (501 high quality bases) assembled on 2006-10-24
> BS15367.3prime
ATGGTCTAGAAAGCTTCTACTTCTTCTTATTACTCTTGCCGTTCGTCTGA
GGAGCTGCTTCTTCGTCGAATTCCAGTTCGCTATCCTCCTCCTCGTCCGA
ATACTCCTCGTAAATCTGACCGTCGTCAAACTCGCCAAAGTTCATCTCGA
CCTTGCCGCATACGTGTACGGGTCCACTTCCCTGCACCAGTTTGAAGGTC
ACTGATCCATTGGGGAACTCGACATTTGGTCTTAAGCTACGGGTCTCGCC
GACCTTCAACACGGCAATGGGGATCTTCAAGGTTTTCTTCTCGCCATCGT
CGTTTATGTTCGTCTCCGCCTGTACAACGTTGAATTCGCCGGTCTTCGCT
TCTGGGCCGAGGGAAATCTGTTTGATGATGAGCTTGTGCGAGTGGACGAT
GTACTCCTCGGGTACATCTGGGACCTCGAACTGTGCGATGGCCTCCTTCT
CGCTGAGTGTGACACCATAAAACGACTCGGACTCCATGTCGACTGATAAC
T
BS15367.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-PA | 471 | CG7911-RA | 1..471 | 487..17 | 2355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-RB | 656 | CG7911-RB | 97..569 | 487..15 | 2365 | 100 | Minus |
CG7911-RA | 818 | CG7911-RA | 259..731 | 487..15 | 2365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:08:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30003988..30004160 | 150..322 | 865 | 100 | Plus |
3R | 32079331 | 3R | 30004303..30004450 | 319..466 | 740 | 100 | Plus |
3R | 32079331 | 3R | 30003768..30003906 | 15..153 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:08:59 has no hits.
BS15367.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:00 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-PA | 1..471 | 17..487 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:08 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-PA | 1..471 | 17..487 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:24:52 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..731 | 15..487 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:21:50 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..731 | 15..487 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:21:50 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30003768..30003904 | 15..151 | 100 | <- | Plus |
3R | 30003990..30004157 | 152..319 | 100 | <- | Plus |
3R | 30004304..30004449 | 320..465 | 100 | <- | Plus |
3R | 30004582..30004603 | 466..487 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:24:52 Download gff for
BS15367.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25829490..25829626 | 15..151 | 100 | <- | Plus |
arm_3R | 25829712..25829879 | 152..319 | 100 | <- | Plus |
arm_3R | 25830026..25830171 | 320..465 | 100 | <- | Plus |
arm_3R | 25830304..25830325 | 466..487 | 100 | | Plus |
BS15367.5prime Sequence
501 bp (501 high quality bases) assembled on 2006-10-24
> BS15367.5prime
GAAGTTATCATTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGTAGAAGCTTTCTAGAC
C
BS15367.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-PA | 471 | CG7911-RA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-RB | 656 | CG7911-RB | 97..569 | 17..489 | 2365 | 100 | Plus |
CG7911-RA | 818 | CG7911-RA | 259..731 | 17..489 | 2365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:32:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30003988..30004160 | 354..182 | 865 | 100 | Minus |
3R | 32079331 | 3R | 30004303..30004450 | 185..38 | 740 | 100 | Minus |
3R | 32079331 | 3R | 30003768..30003906 | 489..351 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:32:42 has no hits.
BS15367.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:01 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-PA | 1..471 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:09 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-PA | 1..471 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 21:06:04 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..731 | 17..489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:38:05 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..731 | 17..489 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:38:05 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30003768..30003904 | 353..489 | 100 | <- | Minus |
3R | 30003990..30004157 | 185..352 | 100 | <- | Minus |
3R | 30004304..30004449 | 39..184 | 100 | <- | Minus |
3R | 30004582..30004603 | 17..38 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 21:06:04 Download gff for
BS15367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25829490..25829626 | 353..489 | 100 | <- | Minus |
arm_3R | 25829712..25829879 | 185..352 | 100 | <- | Minus |
arm_3R | 25830026..25830171 | 39..184 | 100 | <- | Minus |
arm_3R | 25830304..25830325 | 17..38 | 100 | | Minus |
BS15367.complete Sequence
503 bp assembled on 2006-11-01
GenBank Submission: FJ637926
> BS15367.complete
GAAGTTATCAGTCGACATGGAGTCCGAGTCGTTTTATGGTGTCACACTCA
GCGAGAAGGAGGCCATCGCACAGTTCGAGGTCCCAGATGTACCCGAGGAG
TACATCGTCCACTCGCACAAGCTCATCATCAAACAGATTTCCCTCGGCCC
AGAAGCGAAGACCGGCGAATTCAACGTTGTACAGGCGGAGACGAACATAA
ACGACGATGGCGAGAAGAAAACCTTGAAGATCCCCATTGCCGTGTTGAAG
GTCGGCGAGACCCGTAGCTTAAGACCAAATGTCGAGTTCCCCAATGGATC
AGTGACCTTCAAACTGGTGCAGGGAAGTGGACCCGTACACGTATGCGGCA
AGGTCGAGATGAACTTTGGCGAGTTTGACGACGGTCAGATTTACGAGGAG
TATTCGGACGAGGAGGAGGATAGCGAACTGGAATTCGACGAAGAAGCAGC
TCCTCAGACGAACGGCAAGAGTAATAAGAAGAAGTAGAAGCTTTCTAGAC
CAT
BS15367.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-RB | 471 | CG7911-PB | 1..471 | 17..487 | 2355 | 100 | Plus |
CG7911-RA | 471 | CG7911-PA | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-RB | 656 | CG7911-RB | 97..569 | 17..489 | 2365 | 100 | Plus |
CG7911-RA | 818 | CG7911-RA | 259..731 | 17..489 | 2365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:53:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30003988..30004160 | 354..182 | 865 | 100 | Minus |
3R | 32079331 | 3R | 30004303..30004450 | 185..38 | 740 | 100 | Minus |
3R | 32079331 | 3R | 30003768..30003906 | 489..351 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:53:41 has no hits.
BS15367.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:35 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RB | 1..471 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:18 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RB | 79..551 | 17..489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:54 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..729 | 17..487 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:35 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RB | 79..551 | 17..489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:23 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RA | 259..729 | 17..487 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:23 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30003770..30003904 | 353..487 | 100 | <- | Minus |
3R | 30003990..30004157 | 185..352 | 100 | <- | Minus |
3R | 30004304..30004449 | 39..184 | 100 | <- | Minus |
3R | 30004582..30004603 | 17..38 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:54 Download gff for
BS15367.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25829492..25829626 | 353..487 | 100 | <- | Minus |
arm_3R | 25829712..25829879 | 185..352 | 100 | <- | Minus |
arm_3R | 25830026..25830171 | 39..184 | 100 | <- | Minus |
arm_3R | 25830304..25830325 | 17..38 | 100 | | Minus |
BS15367.pep Sequence
Translation from 16 to 486
> BS15367.pep
MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTG
EFNVVQAETNINDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKL
VQGSGPVHVCGKVEMNFGEFDDGQIYEEYSDEEEDSELEFDEEAAPQTNG
KSNKKK*
BS15367.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:48:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7911-PB | 156 | CG7911-PB | 1..156 | 1..156 | 804 | 100 | Plus |
CG7911-PA | 156 | CG7911-PA | 1..156 | 1..156 | 804 | 100 | Plus |
Nlp-PB | 152 | CG7917-PB | 1..152 | 1..156 | 283 | 45.7 | Plus |
Nlp-PA | 152 | CG7917-PA | 1..152 | 1..156 | 283 | 45.7 | Plus |