Clone BS15375 Report

Search the DGRC for BS15375

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:153
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG4995-RC
Protein status:BS15375.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15375.3prime Sequence

763 bp (664 high quality bases) assembled on 2006-10-24

> BS15375.3prime
ATGGTCTAGAAAGCTTTTATTTTAAATTACAATCGGATGCTAAACGTGCT
TTAGATTCTTTGGGAATGTTGATTGTGCTACTCGTGTAATGGCTGTGAAC
GACATCCTTTGGCGTGGACACATACTGATGGGACATGGCATTGTCCGTGA
TTATTTTGCGCACCACTTCCTCAACCGTTGGCGCCGTCGCCTCCAAGTCC
GCTTGGCTCTTGTTGTCTAGGTTGACGAGAGTCAGTGGCTGATCGGAATG
CATTACGGAATCCATGCCGCCCTTGGCATTGCAGATGTCCAGTACCCAGG
ACACCACAAAGAAGCAGGCGGCGTTCATCGGAAAAGCCCGGATCAAGGTG
GAGTTTAGACCGCGAAAGAAGTACTGCGGTCCCTCGTTCCTAAAGCCCTT
CATGGCACAGTCGATGAAGCCATTGTATTTGGCATTCGCGCCCAGGGCAT
CGGCCTGCATGTGGGTCTTCACCACGTCGATGGGGTAGCACGCCAACCAG
GACGACATGCCAGCACATCCGCCGGCCATTAGAGTGTACGCAACGCCGGG
TGTCTCCACTTGACGCATAAGGTACTCGAAGGACACAAAGTAGCTGGCAA
AGCCTGGAATATCCCTTAGAATGGTGGCTGTTAATCCCTTGAAGGCACCT
CTGATACCCTCCGTTTTTACTATGTACTTGAGGCAGTGAATGGGTCCAGT
GAACTTGATGCCGCTATCAACCTGCGTGGACAATTGGAGTCCCGTTTTGG
CCAATTCCATGGG

BS15375.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PA 1200 CG4995-RA 454..1200 763..17 3685 99.7 Minus
CG4995-PC 1083 CG4995-RC 337..1083 763..17 3685 99.7 Minus
CG4995-PB 1200 CG4995-RB 454..1200 763..17 3685 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 475..1222 763..16 3710 99.7 Minus
CG4995-RB 1431 CG4995-RB 660..1407 763..16 3710 99.7 Minus
CG4995-RC 1205 CG4995-RC 434..1181 763..16 3710 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10324375..10324966 607..16 2960 100 Minus
2L 23513712 2L 10324150..10324310 763..603 775 98.8 Minus
Blast to na_te.dros performed on 2015-02-11 04:41:49 has no hits.

BS15375.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:13 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PC 337..1083 17..763 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:25 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PB 454..1200 17..763 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:39:04 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 434..1181 16..763 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:17:44 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 434..1181 16..763 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:17:44 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 10324150..10324309 604..763 98 -> Minus
2L 10324379..10324966 16..603 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:39:04 Download gff for BS15375.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10324150..10324309 604..763 98 -> Minus
arm_2L 10324379..10324966 16..603 100   Minus

BS15375.5prime Sequence

850 bp (739 high quality bases) assembled on 2006-10-24

> BS15375.5prime
GAAGTTATCAGTCGACATGGTTGTGGATTTCGTAGCCGGACTCCTGGGCG
GAGCTGCTGGTGTTCTTGTCGGCCATCCCTTCGATACCGTGAAGGTCCAC
CTGCAAACCGATGATCCTCGCAATCCCAAGTACAAAGGCACATTCCACTG
CTTCCGGACGATAGTGCAAAGAGACAAATTCATAGGATTATATCGTGGTA
TCAGCAGTCCCATGGGAGGAATCGGATTGGTGAACGCCATCGTTTTCGGG
GTCTACGGAAACGTGCAACGCTTGTCCAATGACCCCAATTCGCTGACGTC
ACACTTCTTCGCTGGCTCCATCGCTGGTGTCGCCCAGGGTTTCGTGTGTG
CGCCCATGGAGTTGGCCAAAACGCGACTCCAATTGTCCACGCAGGTTGAT
AGCGGCATCAAGTTCACTGGACCCATTCACTGCCTCAAGTACATAGTAAA
AACGGAGGGTATCAGAGGTGCCTTCAAGGGATTAACAGCCACCATTCTAA
GGGATATTCCAGGCTTTGCCAGCTACTTTGTGTCCTTCGAGTACCTTATG
CGTCAAGTGGAGACACCCGGCGTTGCGTACACTCTAATGGCCGGCGGATG
TGCTGGCATGTCGTCCTGGTTGGCGTGCTACCCCATCGACGTGGTGAAGA
CCCACATGCAGGCCGATGCCCTGGGCGCGAATGCCAAATACAATGGCTTC
ATCGACTGTGCCATGAAGGGCTTTAGGAACGAGGGACCGCAGTACTTCTT
TCGCGGTCTAACTCCACCTTGATCCGGGCTTTTCCGATGAACGCCGCCTG
CTTCTTTGTGGTGTCCTGGGTACTGGACATCTGCAATGCCCAGGGCGGCA

BS15375.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PA 1200 CG4995-RA 118..862 17..761 3725 100 Plus
CG4995-PC 1083 CG4995-RC 1..745 17..761 3725 100 Plus
CG4995-PB 1200 CG4995-RB 118..862 17..761 3725 100 Plus
CG4995-PA 1200 CG4995-RA 862..952 760..850 430 98.9 Plus
CG4995-PC 1083 CG4995-RC 745..835 760..850 430 98.9 Plus
CG4995-PB 1200 CG4995-RB 862..952 760..850 430 98.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:26:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 139..973 17..850 4135 99.8 Plus
CG4995-RB 1431 CG4995-RB 324..1158 17..850 4135 99.8 Plus
CG4995-RC 1205 CG4995-RC 98..932 17..850 4135 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:25:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10323847..10324310 50..513 2320 100 Plus
2L 23513712 2L 10324375..10324717 509..850 1650 99.4 Plus
Blast to na_te.dros performed on 2015-02-12 10:25:59 has no hits.

BS15375.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:14 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PC 1..834 17..849 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:26 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-PB 118..951 17..849 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:57:17 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..931 17..849 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:03:19 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..931 17..849 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:03:19 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 10324379..10324716 513..849 99   Plus
2L 10323746..10323779 17..50 100 -> Plus
2L 10323848..10324309 51..512 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:57:17 Download gff for BS15375.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10323746..10323779 17..50 100 -> Plus
arm_2L 10323848..10324309 51..512 100 -> Plus
arm_2L 10324379..10324716 513..849 99   Plus

BS15375.complete Sequence

1115 bp assembled on 2006-11-01

GenBank Submission: FJ637927

> BS15375.complete
GAAGTTATCAGTCGACATGGTTGTGGATTTCGTAGCCGGACTCCTGGGCG
GAGCTGCTGGTGTTCTTGTCGGCCATCCCTTCGATACCGTGAAGGTCCAC
CTGCAAACCGATGATCCTCGCAATCCCAAGTACAAAGGCACATTCCACTG
CTTCCGGACGATAGTGCAAAGAGACAAATTCATAGGATTATATCGTGGTA
TCAGCAGTCCCATGGGAGGAATCGGATTGGTGAACGCCATCGTTTTCGGG
GTCTACGGAAACGTGCAACGCTTGTCCAATGACCCCAATTCGCTGACGTC
ACACTTCTTCGCTGGCTCCATCGCTGGTGTCGCCCAGGGTTTCGTGTGTG
CGCCCATGGAGTTGGCCAAAACGCGACTCCAATTGTCCACGCAGGTTGAT
AGCGGCATCAAGTTCACTGGACCCATTCACTGCCTCAAGTACATAGTAAA
AACGGAGGGTATCAGAGGTGCCTTCAAGGGATTAACAGCCACCATTCTAA
GGGATATTCCAGGCTTTGCCAGCTACTTTGTGTCCTTCGAGTACCTTATG
CGTCAAGTGGAGACACCCGGCGTTGCGTACACTCTAATGGCCGGCGGATG
TGCTGGCATGTCGTCCTGGTTGGCGTGCTACCCCATCGACGTGGTGAAGA
CCCACATGCAGGCCGATGCCCTGGGCGCGAATGCCAAATACAATGGCTTC
ATCGACTGTGCCATGAAGGGCTTTAGGAACGAGGGACCGCAGTACTTCTT
TCGCGGTCTAAACTCCACCTTGATCCGGGCTTTTCCGATGAACGCCGCCT
GCTTCTTTGTGGTGTCCTGGGTACTGGACATCTGCAATGCCAAGGGCGGC
ATGGATTCCGTAATGCATTCCGATCAGCCACTGACTCTCGTCAACCTAGA
CAACAAGAGCCAAGCGGACTTGGAGGCGACGGCGCCAACGGTTGAGGAAG
TGGTGCGCAAAATAATCACGGACAATGCCATGTCCCATCAGTATGTGTCC
ACGCCAAAGGATGTCGTTCACAGCCATTACACGAGTAGCACAATCAACAT
TCCCAAAGAATCTAAAGCACGTTTAGCATCCGATTGTAATTTAAAATAAA
AGCTTTCTAGACCAT

BS15375.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1083 CG4995-PD 1..1083 17..1099 5415 100 Plus
CG4995-RB 1200 CG4995-PB 118..1200 17..1099 5415 100 Plus
CG4995-RC 1083 CG4995-PC 1..1083 17..1099 5415 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-RD 1246 CG4995-RD 139..1222 17..1100 5420 100 Plus
CG4995-RB 1431 CG4995-RB 324..1407 17..1100 5420 100 Plus
CG4995-RC 1205 CG4995-RC 98..1181 17..1100 5420 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10324375..10324966 509..1100 2960 100 Plus
2L 23513712 2L 10323847..10324310 50..513 2320 100 Plus
Blast to na_te.dros performed on 2014-11-27 06:50:01 has no hits.

BS15375.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:56 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 118..1200 17..1099 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:05:29 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 324..1407 17..1100 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:55:48 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..1178 17..1097 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:56 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RB 324..1407 17..1100 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:55:37 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
CG4995-RC 98..1178 17..1097 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:55:37 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10323746..10323779 17..50 100 -> Plus
2L 10323848..10324309 51..512 100 -> Plus
2L 10324379..10324963 513..1097 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:55:48 Download gff for BS15375.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10323746..10323779 17..50 100 -> Plus
arm_2L 10323848..10324309 51..512 100 -> Plus
arm_2L 10324379..10324963 513..1097 100   Plus

BS15375.pep Sequence

Translation from 16 to 1098

> BS15375.pep
MVVDFVAGLLGGAAGVLVGHPFDTVKVHLQTDDPRNPKYKGTFHCFRTIV
QRDKFIGLYRGISSPMGGIGLVNAIVFGVYGNVQRLSNDPNSLTSHFFAG
SIAGVAQGFVCAPMELAKTRLQLSTQVDSGIKFTGPIHCLKYIVKTEGIR
GAFKGLTATILRDIPGFASYFVSFEYLMRQVETPGVAYTLMAGGCAGMSS
WLACYPIDVVKTHMQADALGANAKYNGFIDCAMKGFRNEGPQYFFRGLNS
TLIRAFPMNAACFFVVSWVLDICNAKGGMDSVMHSDQPLTLVNLDNKSQA
DLEATAPTVEEVVRKIITDNAMSHQYVSTPKDVVHSHYTSSTINIPKESK
ARLASDCNLK*

BS15375.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG4995-PD 360 CG4995-PD 1..360 1..360 1889 100 Plus
CG4995-PC 360 CG4995-PC 1..360 1..360 1889 100 Plus
CG4995-PB 399 CG4995-PB 40..399 1..360 1889 100 Plus
CG4995-PA 399 CG4995-PA 40..399 1..360 1889 100 Plus
CG3476-PA 299 CG3476-PA 15..299 2..275 403 37.4 Plus