Clone Sequence Records
BS15382.5prime Sequence
553 bp (399 high quality bases) assembled on 2006-10-24
> BS15382.5prime
GACGTTCCCCTTGGGAGGTGAAAATGCATATGAAACATCTAGATTTATAT
TCCCAGGCTATAAAGACGCTCCGCTGGACACAGCCAATGCGGGCTCTGTC
CACGGTAAACACCAGTTCCGGCGTACAAGGCAATCTTTCACCTGCGGCAC
CTGCTCCGGAACCGGATAAACTCTACAGCAAGCTGGAGATTGAGCTGCGG
GGTATTGATCCGGCAGTTCTGAAGAGCTACACCTGGTTTGCTACTACTGC
TGCCGAGCATTTGGGCATTGAAAAGGGAAAATGTTGGTCACCTCGCAAGG
CGCACCACGAGCGGATGACGCTCCTGAAGTCGGTGCATATCTACAAGAAA
CATCGCGTACAGTACGAGGTGCGAACCCACTTCCGCTATATGAACTTCCA
CAAGTTGACGGGCTCCACGCTAGATACATTTCTAGAGTATATTGAACGTA
ATCTGCCCGAGGGCGTAGCGCTGCAGGCTTCCAGGACTGAACTGCATGAT
ATCCCAGAGCACTTGCGCCAGCCGCCGGAGCAAGTTTAGAAGCTTTCTAG
ACC
BS15382.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:19:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4247-PB | 522 | mRpS10-RB | 2..522 | 19..539 | 2530 | 99.4 | Plus |
| CG4247-PA | 492 | mRpS10-RA | 7..492 | 54..539 | 2355 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:29:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS10-RB | 746 | CG4247-RB | 62..582 | 19..539 | 2560 | 99.4 | Plus |
| mRpS10-RA | 723 | CG4247-RA | 74..559 | 54..539 | 2385 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:29:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15229763..15230027 | 19..283 | 1325 | 100 | Plus |
| 3R | 32079331 | 3R | 15230096..15230352 | 283..539 | 1240 | 98.8 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:29:55 has no hits.
BS15382.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:25:24 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4247-PB | 2..522 | 19..539 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:01:40 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4247-PB | 2..522 | 19..539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:55:13 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 62..582 | 19..539 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:01:33 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 62..582 | 19..539 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:01:33 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15229763..15230027 | 19..283 | 100 | -> | Plus |
| 3R | 15230097..15230352 | 284..539 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:55:13 Download gff for
BS15382.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11055485..11055749 | 19..283 | 100 | -> | Plus |
| arm_3R | 11055819..11056074 | 284..539 | 98 | | Plus |
BS15382.complete Sequence
554 bp assembled on 2010-07-02
GenBank Submission: KX801199
> BS15382.complete
GAAGTTATCAGTCGACATGAAAATGCATATGAAACATCTAGATTTATATT
CCCAGGCTATAAAGACGCTCCGCTGGACACAGCCAATGCGGGCTCTGTCC
ACGGTAAACACCAGTTCCGGCGTACAAGGCAATCTTTCACCTGCGGCACC
TGCTCCGGAACCGGATAAACTCTACAGCAAGCTGGAGATTGAGCTGCGGG
GTATTGATCCGGCAGTTCTGAAGAGCTACACCTGGTTTGCTACTACTGCT
GCCGAGCATTTGGGCATTGAAAAGGGAAAATGTTGGTCACCTCGCAAGGC
GCACCACGAGCGGATGACGCTCCTGAAGTCGGTGCATATCTACAAGAAAC
ATCGCGTACAGTACGAGGTGCGAACCCACTTCCGCTATATGAACTTCCAC
AAGTTGACGGGCTCCACGCTAGATACATTTCTAGAGTATATTGAACGTAA
TCTGCCCGAGGGCGTAGCGCTGCAGGCTTCCAGGACTGAGCTGCAGGAGA
TCCCAGAGCACTTGCGCCAGCCGCCGGAGCAAGTTTAGAAGCTTTCTAGA
CCAT
BS15382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS10-RB | 522 | CG4247-PB | 1..522 | 17..538 | 2610 | 100 | Plus |
| mRpS10-RA | 492 | CG4247-PA | 7..492 | 53..538 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS10-RB | 746 | CG4247-RB | 61..582 | 17..538 | 2610 | 100 | Plus |
| mRpS10-RA | 723 | CG4247-RA | 74..559 | 53..538 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15229762..15230027 | 17..282 | 1330 | 100 | Plus |
| 3R | 32079331 | 3R | 15230096..15230352 | 282..538 | 1285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:21:15 has no hits.
BS15382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 13:24:55 Download gff for
BS15382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 10..531 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:17:19 Download gff for
BS15382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 61..582 | 17..538 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:27:24 Download gff for
BS15382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS10-RB | 61..582 | 17..538 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:27:24 Download gff for
BS15382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15229762..15230027 | 17..282 | 100 | -> | Plus |
| 3R | 15230097..15230352 | 283..538 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:17:19 Download gff for
BS15382.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11055484..11055749 | 17..282 | 100 | -> | Plus |
| arm_3R | 11055819..11056074 | 283..538 | 100 | | Plus |
BS15382.pep Sequence
Translation from 16 to 537
> BS15382.pep
MKMHMKHLDLYSQAIKTLRWTQPMRALSTVNTSSGVQGNLSPAAPAPEPD
KLYSKLEIELRGIDPAVLKSYTWFATTAAEHLGIEKGKCWSPRKAHHERM
TLLKSVHIYKKHRVQYEVRTHFRYMNFHKLTGSTLDTFLEYIERNLPEGV
ALQASRTELQEIPEHLRQPPEQV*
BS15382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:34:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS10-PB | 173 | CG4247-PB | 1..173 | 1..173 | 915 | 100 | Plus |
| mRpS10-PA | 163 | CG4247-PA | 3..163 | 13..173 | 849 | 100 | Plus |
