Clone BS15414 Report

Search the DGRC for BS15414

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG2211-RA
Protein status:BS15414.pep: full length peptide match
Sequenced Size:1025

Clone Sequence Records

BS15414.complete Sequence

1025 bp assembled on 2010-02-09

GenBank Submission: KX803710

> BS15414.complete
GAAGTTATCAGTCGACATGTTTCTGTTCATCAGCCGTCCCACGCGGACGC
TGGGCAACCGAATGCAGGCGGTTCGGGAGCGCTTGGGTCCGGACTTAGCT
GATCAACTGGACGCTCTGCATCGTAATGTGATGCGGACTGGTCTGGTGTC
CACACAGGAGCTGGAGGAGGCATTCCGCAAAACGCGCGACATGGACCACA
ACCCGAACCGGTTGAATCTGCTCTGGCTGCTGGGCATCGTGTTCTTCATC
ATGGTGGCCACCCCGGTCTTTTATGAGACCATCTCGTTCCTGCTCGGAGT
GCGTTGCTTTCTGCCCAACAACTACTTGGTATGGGAGGCCACCAGGCCCA
TTAGTGACTGCGAGTTTTGTAAAGGGGTGAGGGCTCCCCTGATCTTGGCC
AATCTCACCATGGAGGAGTTTGCACCGCACGCGTACTCCTCAATGCCCAT
CATTGTGAAGAGGGCGGTGGCTCACTGGCCAGCACAAAAGAACCTCAGCT
TTGCCTTCATAAAAGAATTGTACGAAAGTGTCCCGGGAGCAATGGACTCA
GATTGCCAGTTTCTGCACTTCAACTCTGATCTCAAGTCGCTGAAGCATGT
GTTTTCCATGTCCGCGGAGCGTTCAAATCTTACTCAAGGAGTGCCCTGGT
TCGTGGGCTGGAGTGTCTGCCAGCCGGCCGTCCTGGCGGAGCTCAGAAAG
CTGTATCCCCGCCCGCATTTCCTGCCCTTCGATGCTGAAATGCCTCACAC
GGACTTCATATTAATGGGCTACGAGCAAGGGGCTGTGATGCATCTTGATT
ACATTCCCCGCCTGTTGTGGCAAGCTCAGTTAAGTGGCAACAAGACCTGG
TTTCTGGCACCTGCTCCTGAATGTGACCACCAGTGTCAGCCCTTCTCCTT
CTATGTGGAGCCCGGAGATGCTGTGTTGGTGGACACACGCATCTGGTACC
ATGCCAATTCAATTCCCAAGGGTCAGTTTTCGCTCACCGTTCAGTCCGAG
TATGGATGAAAGCTTTCTAGACCAT

BS15414.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 993 CG2211-PB 1..993 17..1009 4965 100 Plus
CG2211-RA 993 CG2211-PA 1..993 17..1009 4965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 56..1048 17..1009 4965 100 Plus
CG2211-RA 1941 CG2211-RA 771..1763 17..1009 4965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334457 793..25 3845 100 Minus
3L 28110227 3L 1333417..1333632 1009..794 1080 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:28:07 has no hits.

BS15414.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:28 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 721..1706 23..1008 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:55 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 777..1762 23..1008 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:38 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 721..1706 23..1008 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:32 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 777..1762 23..1008 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:32 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1333418..1333632 794..1008 100 <- Minus
3L 1333689..1334459 23..793 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:55 Download gff for BS15414.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333418..1333632 794..1008 100 <- Minus
arm_3L 1333689..1334459 23..793 99   Minus

BS15414.3prime Sequence

716 bp (699 high quality bases) assembled on 2006-12-21

> BS15414.3prime
ATGGTCTAGAAAGCTTTCCCTTTACTCGGACTGAACGGTGAGCGAAAACT
GACCCTTGGGAATTGAATTGGCATGGTACCAGATGCGTGTGTCCACCAAC
ACAGCATCTCCGGGCTCCACATAGAAGGAGAAGGGCTGACACTGGTGGTC
ACATTCAGGAGCAGGTGCCAGAAACCAGGTCTTGTTGCCACTTAACTGAG
CTTGCCACAACAGGCGGGGAATGTAATCAAGATGCATCACAGCCCCTTGC
TCGTAGCCCATTAATATGAAGTCCGTGTGAGGCATTTCAGCATCGAAGGG
CAGGAAATGCGGGCGGGGATACAGCTTTCTGAGCTCCGCCAGGACGGCCG
GCTGGCAGACACTCCAGCCCACGAACCAGGGCACTCCTTGAGTAAGATTT
GAACGCTCCGCGGACATGGAAAACACATGCTTCAGCGACTTGAGATCAGA
GTTGAAGTGCAGAAACTGGCAATCTGAGTCCATTGCTCCCGGGACACTTT
CGTACAATTCTTTTATGAAGGCAAAGCTGAGGTTCTTTTGTGCTGGCCAG
TGAGCCACCGCCCTCTTCACAATGATGGGCATTGAGGAGTACGCGTGCGG
TGCAAACTCCTCCATGGTGAGATTGGCCAAGATCAGGAGAGCCCTCACCC
CTTTACAAAACTCGCAGTCACTAATGGGCCTGGTGGCCTCCCATACCAAG
TAGTTGTTGGGCAGAA

BS15414.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PA 993 CG2211-RA 293..986 716..23 3445 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:21:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 348..1041 716..23 3455 99.9 Minus
CG2211-RA 1941 CG2211-RA 1063..1756 716..23 3455 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334173 232..716 2410 99.8 Plus
3L 28110227 3L 1333424..1333632 23..231 1045 100 Plus
Blast to na_te.dros performed on 2015-02-08 07:20:58 has no hits.

BS15414.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:10 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 295..993 17..714 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:40 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 295..993 17..714 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:23:25 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 1063..1759 19..716 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:21:26 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 1063..1759 19..716 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:21:26 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 1333421..1333632 19..231 99 <- Plus
3L 1333689..1334173 232..716 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:23:25 Download gff for BS15414.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333421..1333632 19..231 99 <- Plus
arm_3L 1333689..1334173 232..716 99   Plus

BS15414.5prime Sequence

836 bp (665 high quality bases) assembled on 2006-12-21

> BS15414.5prime
GAAGTTATCACTTTACATGTTTCTGTTCATCAGCCGTCCCACGCGGACGC
TGGGCAACCGAATGCAGGCGGTTCGGGAGCGCTTGGGTCCGGACTTAGCT
GATCAACTGGACGCTCTGCATCGTAATGTGATGCGGACTGGTCTGGTGTC
CACACAGGAGCTGGAGGAGGCATTCCGCAAAACGCGCGACATGGACCACA
ACCCGAACCGGTTGAATCTGCTCTGGCTGCTGGGCATCGTGTTCTTCATC
ATGGTGGCCACCCCGGTCTTTTATGAGACCATCTCGTTCCTGCTCGGAGT
GCGTTGCTTTCTGCCCAACAACTACTTGGTATGGGAGGCCACCAGGCCCA
TTAGTGACTGCGAGTTTTGTAAAGGGGTGAGGGCTCCCCTGATCTTGGCC
AATCTCACCATGGAGGAGTTTGCACCGCACGCGTACTCCTCAATGCCCAT
CATTGTGAAGAGGGCGGTGGCTCACTGGCCAGCACAAAAGAACCTCAGCT
TTGCCTTCATAAAAGAATTGTACGAAAGTGTCCCGGGAGCAATGGACTCA
GATTGCCAGTTTCTGCACTTCAACTCTGATCTCAAGTCGCTGAAGCATGT
GTTTTCCATGTCCGCGGAGCGTTCAAATCTTACTCAAGGAGTGCCCTGGT
TCGTGGGCTGGAGTGTCTGCCAGCCGGCCGTCCTGGCGGAGCTCAGAAAG
CTGTATCCCCGCCCGCATTTCCTGCCCTTCGATGCTGAAATGCCTCACAC
GGACTTCATATTAATGGGCTACGAGCAAGGGGCTGTGATGCATCTTGATT
ACATTCCCCGCCTGTTGTGGCAAGCTCAGTTAAGTG

BS15414.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PA 993 CG2211-RA 1..820 17..836 4100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-RB 1226 CG2211-RB 56..875 17..836 4100 100 Plus
CG2211-RA 1941 CG2211-RA 771..1590 17..836 4100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1333689..1334457 793..25 3845 100 Minus
3L 28110227 3L 1333590..1333632 836..794 215 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:31:52 has no hits.

BS15414.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:12 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 1..820 17..836 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:42 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-PA 1..820 17..836 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:02:57 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 759..1590 6..836 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:05:55 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2211-RA 759..1590 6..836 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:05:55 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 1333590..1333632 794..836 100 <- Minus
3L 1333689..1334457 25..793 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:02:57 Download gff for BS15414.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1333590..1333632 794..836 100 <- Minus
arm_3L 1333689..1334457 25..793 100   Minus

BS15414.pep Sequence

Translation from 16 to 1008

> BS15414.pep
MFLFISRPTRTLGNRMQAVRERLGPDLADQLDALHRNVMRTGLVSTQELE
EAFRKTRDMDHNPNRLNLLWLLGIVFFIMVATPVFYETISFLLGVRCFLP
NNYLVWEATRPISDCEFCKGVRAPLILANLTMEEFAPHAYSSMPIIVKRA
VAHWPAQKNLSFAFIKELYESVPGAMDSDCQFLHFNSDLKSLKHVFSMSA
ERSNLTQGVPWFVGWSVCQPAVLAELRKLYPRPHFLPFDAEMPHTDFILM
GYEQGAVMHLDYIPRLLWQAQLSGNKTWFLAPAPECDHQCQPFSFYVEPG
DAVLVDTRIWYHANSIPKGQFSLTVQSEYG*

BS15414.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG2211-PB 330 CG2211-PB 1..330 1..330 1773 100 Plus
CG2211-PA 330 CG2211-PA 1..330 1..330 1773 100 Plus
CG14331-PC 312 CG14331-PC 54..311 71..329 397 34 Plus