Clone Sequence Records
BS15417.5prime Sequence
441 bp (441 high quality bases) assembled on 2006-12-21
> BS15417.5prime
GAAGTTATCACTCGACATGGCTCGTACTAAGCAGACTGCCCGTAAGTCGA
CCGGAGGAAAGGCTCCTCGTAAGCAGCTAGCCACCAAGGCTGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCCCATCGTTATCGTCCCGG
AACTGTGGCTCTTCGTGAGATCCGTCGTTACCAGAAGTCGACCGAGTTGC
TCATCCGCAAGCTGCCCTTCCAGCGTCTGGTTCGTGAAATCGCTCAGGAT
TTCAAGACCGATCTGCGTTTCCAGTCGGCTGCCATCGGTGCCTTGCAGGA
AGCATCTGAGGCGTACCTGGTGGGTCTCTTCGAGGACACCAACTTGTGCG
CTATCCACGCCAAGCGCGTGACAATCATGCCTAAGGACATCCAGTTGGCG
CGCCGCATCCGTGGCGAGCGTGCTTAAAAGCTTTCTAGACC
BS15417.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8989-PA | 411 | His3.3B-RA | 1..411 | 17..427 | 2055 | 100 | Plus |
CG8989-PC | 411 | His3.3B-RC | 1..411 | 17..427 | 2055 | 100 | Plus |
CG8989-PB | 411 | His3.3B-RB | 1..411 | 17..427 | 2055 | 100 | Plus |
CG5825-PA | 411 | His3.3A-RA | 1..215 | 17..231 | 475 | 88.8 | Plus |
CG5825-PB | 372 | His3.3A-RB | 1..215 | 17..231 | 475 | 88.8 | Plus |
CG5825-PA | 411 | His3.3A-RA | 292..378 | 308..394 | 185 | 88.5 | Plus |
CG31613-PA | 411 | His3:CG31613-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33803-PA | 411 | His3:CG33803-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33806-PA | 411 | His3:CG33806-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33809-PA | 411 | His3:CG33809-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33848-PA | 411 | His3:CG33848-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33863-PA | 411 | His3:CG33863-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33812-PA | 411 | His3:CG33812-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33815-PA | 411 | His3:CG33815-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33833-PA | 411 | His3:CG33833-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33836-PA | 411 | His3:CG33836-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33839-PA | 411 | His3:CG33839-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33842-PA | 411 | His3:CG33842-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33845-PA | 411 | His3:CG33845-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33851-PA | 411 | His3:CG33851-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33854-PA | 411 | His3:CG33854-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33857-PA | 411 | His3:CG33857-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33860-PA | 411 | His3:CG33860-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33866-PA | 411 | His3:CG33866-RA | 187..233 | 203..249 | 185 | 95.7 | Plus |
CG33830-PA | 411 | His3:CG33830-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33821-PA | 411 | His3:CG33821-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33824-PA | 411 | His3:CG33824-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33818-PA | 411 | His3:CG33818-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
CG33827-PA | 411 | His3:CG33827-RA | 187..230 | 203..246 | 170 | 95.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..525 | 15..427 | 2065 | 100 | Plus |
His3.3B-RB | 1537 | CG8989-RB | 251..663 | 15..427 | 2065 | 100 | Plus |
His3.3B-RC | 1519 | CG8989-RC | 233..645 | 15..427 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:50:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 299..15 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 5055259..5055541 | 17..299 | 875 | 87.3 | Plus |
2L | 23513712 | 2L | 21430312..21430722 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21420186..21420596 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21425250..21425660 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21435356..21435766 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21440244..21440654 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21494932..21495342 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21454445..21454855 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21484738..21485148 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21489887..21490297 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21499977..21500387 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21505030..21505440 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21510075..21510485 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21515119..21515529 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21520166..21520576 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21525009..21525419 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21529852..21530262 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21534693..21535103 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21541210..21541620 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21459504..21459914 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21464564..21464974 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21469607..21470017 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21474650..21475060 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21479693..21480103 | 17..427 | 720 | 78.3 | Plus |
X | 23542271 | X | 9154112..9154247 | 427..292 | 665 | 99.3 | Minus |
2L | 23513712 | 2L | 21405669..21405970 | 126..427 | 580 | 79.5 | Plus |
2L | 23513712 | 2L | 5055640..5055760 | 308..428 | 365 | 86.8 | Plus |
3R | 32079331 | 3R | 1431192..1431302 | 307..417 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:50:20 has no hits.
BS15417.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:18 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:53 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 23:21:00 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 233..645 | 15..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:52:58 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 233..645 | 15..427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:52:58 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154380..9154663 | 15..298 | 100 | | Minus |
X | 9154112..9154240 | 299..427 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 23:21:00 Download gff for
BS15417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048145..9048273 | 299..427 | 100 | <- | Minus |
arm_X | 9048413..9048696 | 15..298 | 100 | | Minus |
BS15417.3prime Sequence
441 bp (441 high quality bases) assembled on 2006-12-21
> BS15417.3prime
ATGGTCTAGAAAGCTTTTACCCTCGCTCGCCACGGATGCGGCGCGCCAAC
TGGATGTCCTTAGGCATGATTGTCACGCGCTTGGCGTGGATAGCGCACAA
GTTGGTGTCCTCGAAGAGACCCACCAGGTACGCCTCAGATGCTTCCTGCA
AGGCACCGATGGCAGCCGACTGGAAACGCAGATCGGTCTTGAAATCCTGA
GCGATTTCACGAACCAGACGCTGGAAGGGCAGCTTGCGGATGAGCAACTC
GGTCGACTTCTGGTAACGACGGATCTCACGAAGAGCCACAGTTCCGGGAC
GATAACGATGGGGCTTCTTCACTCCGCCGGTGGATGGCGCCGATTTACGG
GCAGCCTTGGTGGCTAGCTGCTTACGAGGAGCCTTTCCTCCGGTCGACTT
ACGGGCAGTCTGCTTAGTACGAGCCATGTCGACTGATAACT
BS15417.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8989-PA | 411 | His3.3B-RA | 1..404 | 427..24 | 2020 | 100 | Minus |
CG8989-PC | 411 | His3.3B-RC | 1..404 | 427..24 | 2020 | 100 | Minus |
CG8989-PB | 411 | His3.3B-RB | 1..404 | 427..24 | 2020 | 100 | Minus |
CG5825-PA | 411 | His3.3A-RA | 1..215 | 427..213 | 475 | 88.8 | Minus |
CG5825-PB | 372 | His3.3A-RB | 1..215 | 427..213 | 475 | 88.8 | Minus |
CG5825-PA | 411 | His3.3A-RA | 292..378 | 136..50 | 185 | 88.5 | Minus |
CG31613-PA | 411 | His3:CG31613-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33803-PA | 411 | His3:CG33803-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33806-PA | 411 | His3:CG33806-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33809-PA | 411 | His3:CG33809-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33848-PA | 411 | His3:CG33848-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33863-PA | 411 | His3:CG33863-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33812-PA | 411 | His3:CG33812-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33815-PA | 411 | His3:CG33815-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33833-PA | 411 | His3:CG33833-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33836-PA | 411 | His3:CG33836-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33839-PA | 411 | His3:CG33839-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33842-PA | 411 | His3:CG33842-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33845-PA | 411 | His3:CG33845-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33851-PA | 411 | His3:CG33851-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33854-PA | 411 | His3:CG33854-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33857-PA | 411 | His3:CG33857-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33860-PA | 411 | His3:CG33860-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33866-PA | 411 | His3:CG33866-RA | 187..233 | 241..195 | 185 | 95.7 | Minus |
CG33830-PA | 411 | His3:CG33830-RA | 187..230 | 241..198 | 170 | 95.4 | Minus |
CG33821-PA | 411 | His3:CG33821-RA | 187..230 | 241..198 | 170 | 95.4 | Minus |
CG33824-PA | 411 | His3:CG33824-RA | 187..230 | 241..198 | 170 | 95.4 | Minus |
CG33818-PA | 411 | His3:CG33818-RA | 187..230 | 241..198 | 170 | 95.4 | Minus |
CG33827-PA | 411 | His3:CG33827-RA | 187..230 | 241..198 | 170 | 95.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:56:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..518 | 429..24 | 2030 | 100 | Minus |
His3.3B-RB | 1537 | CG8989-RB | 251..656 | 429..24 | 2030 | 100 | Minus |
His3.3B-RC | 1519 | CG8989-RC | 233..638 | 429..24 | 2030 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:56:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 145..429 | 1425 | 100 | Plus |
2L | 23513712 | 2L | 5055259..5055541 | 427..145 | 875 | 87.3 | Minus |
2L | 23513712 | 2L | 21420186..21420589 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21425250..21425653 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21430312..21430715 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21435356..21435759 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21440244..21440647 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21454445..21454848 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21484738..21485141 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21489887..21490290 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21494932..21495335 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21499977..21500380 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21505030..21505433 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21510075..21510478 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21515119..21515522 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21520166..21520569 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21525009..21525412 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21529852..21530255 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21534693..21535096 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21541210..21541613 | 427..24 | 700 | 78.2 | Minus |
2L | 23513712 | 2L | 21459504..21459907 | 427..24 | 685 | 78 | Minus |
2L | 23513712 | 2L | 21464564..21464967 | 427..24 | 685 | 78 | Minus |
2L | 23513712 | 2L | 21469607..21470010 | 427..24 | 685 | 78 | Minus |
2L | 23513712 | 2L | 21474650..21475053 | 427..24 | 685 | 78 | Minus |
2L | 23513712 | 2L | 21479693..21480096 | 427..24 | 685 | 78 | Minus |
X | 23542271 | X | 9154119..9154247 | 24..152 | 630 | 99.2 | Plus |
2L | 23513712 | 2L | 21405669..21405963 | 318..24 | 545 | 79 | Minus |
2L | 23513712 | 2L | 5055640..5055752 | 136..24 | 355 | 87.6 | Minus |
3R | 32079331 | 3R | 1431192..1431302 | 137..27 | 210 | 79.3 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:56:54 has no hits.
BS15417.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:17 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 17..427 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:51 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8989-PA | 1..411 | 17..427 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:31:17 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..645 | 17..434 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:32 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 228..645 | 17..434 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:32 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154380..9154668 | 146..434 | 98 | | Plus |
X | 9154112..9154240 | 17..145 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:31:17 Download gff for
BS15417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048145..9048273 | 17..145 | 97 | <- | Plus |
arm_X | 9048413..9048701 | 146..434 | 98 | | Plus |
BS15417.complete Sequence
443 bp assembled on 2006-11-29
GenBank Submission: FJ637932
> BS15417.complete
GAAGTTATCAGTCGACATGGCTCGTACTAAGCAGACTGCCCGTAAGTCGA
CCGGAGGAAAGGCTCCTCGTAAGCAGCTAGCCACCAAGGCTGCCCGTAAA
TCGGCGCCATCCACCGGCGGAGTGAAGAAGCCCCATCGTTATCGTCCCGG
AACTGTGGCTCTTCGTGAGATCCGTCGTTACCAGAAGTCGACCGAGTTGC
TCATCCGCAAGCTGCCCTTCCAGCGTCTGGTTCGTGAAATCGCTCAGGAT
TTCAAGACCGATCTGCGTTTCCAGTCGGCTGCCATCGGTGCCTTGCAGGA
AGCATCTGAGGCGTACCTGGTGGGTCTCTTCGAGGACACCAACTTGTGCG
CTATCCACGCCAAGCGCGTGACAATCATGCCTAAGGACATCCAGTTGGCG
CGCCGCATCCGTGGCGAGCGTGCTTAAAAGCTTTCTAGACCAT
BS15417.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 411 | CG8989-PE | 1..411 | 17..427 | 2055 | 100 | Plus |
His3.3B-RB | 411 | CG8989-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
His3.3B-RC | 411 | CG8989-PC | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3B-RE | 2114 | CG8989-RE | 113..525 | 15..427 | 2065 | 100 | Plus |
His3.3B-RB | 1537 | CG8989-RB | 251..663 | 15..427 | 2065 | 100 | Plus |
His3.3B-RC | 1519 | CG8989-RC | 233..645 | 15..427 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9154379..9154663 | 299..15 | 1425 | 100 | Minus |
2L | 23513712 | 2L | 5055259..5055541 | 17..299 | 875 | 87.3 | Plus |
2L | 23513712 | 2L | 21420186..21420596 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21425250..21425660 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21430312..21430722 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21435356..21435766 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21440244..21440654 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21454445..21454855 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21484738..21485148 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21489887..21490297 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21494932..21495342 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21499977..21500387 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21505030..21505440 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21510075..21510485 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21515119..21515529 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21520166..21520576 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21525009..21525419 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21529852..21530262 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21534693..21535103 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21541210..21541620 | 17..427 | 735 | 78.6 | Plus |
2L | 23513712 | 2L | 21459504..21459914 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21464564..21464974 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21469607..21470017 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21474650..21475060 | 17..427 | 720 | 78.3 | Plus |
2L | 23513712 | 2L | 21479693..21480103 | 17..427 | 720 | 78.3 | Plus |
X | 23542271 | X | 9154112..9154247 | 427..292 | 665 | 99.3 | Minus |
2L | 23513712 | 2L | 21405669..21405970 | 126..427 | 580 | 79.5 | Plus |
2L | 23513712 | 2L | 5055640..5055760 | 308..428 | 365 | 86.8 | Plus |
3R | 32079331 | 3R | 1431192..1431302 | 307..417 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:22:39 has no hits.
BS15417.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:46:31 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 1..411 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:34:13 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 239..656 | 10..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:47:58 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 235..643 | 17..425 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:46:31 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RB | 239..656 | 10..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:27 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
His3.3B-RC | 235..643 | 17..425 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:27 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9154114..9154240 | 299..425 | 100 | <- | Minus |
X | 9154380..9154661 | 17..298 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:47:58 Download gff for
BS15417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9048147..9048273 | 299..425 | 100 | <- | Minus |
arm_X | 9048413..9048694 | 17..298 | 100 | | Minus |
BS15417.pep Sequence
Translation from 16 to 426
> BS15417.pep
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR
EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
BS15417.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:53:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
His3.3A-PD | 136 | CG5825-PD | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3A-PC | 136 | CG5825-PC | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3A-PA | 136 | CG5825-PA | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3B-PE | 136 | CG8989-PE | 1..136 | 1..136 | 676 | 100 | Plus |
His3.3B-PB | 136 | CG8989-PB | 1..136 | 1..136 | 676 | 100 | Plus |