Clone Sequence Records
BS15419.3prime Sequence
860 bp (779 high quality bases) assembled on 2006-12-21
> BS15419.3prime
ATGGTCTAGAAAGCTTTCACGACTCGGGGCGTTTAAATTCCAATTCAATA
CATTCGTCAGGTAATTGTGAATAGCTGCTACTAGTAGCACTGAAGGAAAC
ATTAAGTTTGGGATGTTTAAAGTGCTTCGAAACCAAGTCATCCTTGCCGG
TTTTATAAAAATGCATTTTCAAAGGCTTCGTTCGCTGATTTAGAGCGCGG
TTCATTGTTGACTTGCTGAAGGCAAAGAACTCGTCGTACAAAACATGGTT
GATCATGCTGAATTCCCTGAGACGGGGACAGGCAAGAAGCACGTCCCATA
TACCATCGGCGTTGACCCATATACGCGAGTTCTCCAGATGCAGTTGCTCC
AAGAGCGGAAAGCAATAGGTGATCGTGGAAAAGTCAATGGCAGCACATCC
TTCATCATCGACGAGAGTTAAACATCGGAGATTTCGCAGTTTGGCCAGCA
CCTCCGTTGGCCTCATCCAGATATTATTACTGAATGCGGCAGTCAACACA
TCTTGACCCCTTATGCTTCCAATTTCGCACAGTAGATCGTCCACCTGGTA
GAAGTTGTGCAGGCGCAGCTTTATCAGTTTAGGCAGGCTCAACAGTTGGC
TGATGTTGTCCCTGTTTAGGTAAACTATGTCCAGCTCCAGCTCCTCCAGT
TCATGCAGCATACAGATGGATCGCACGTATGCATTCTGTTCGATCTTTTG
CCACTGGATACTGAGTGTCTGTAGTCGCAGGTTTTGACAGATATCCTCGA
AGCCCTGCGGGCTCAGGTACCAGCACAGCTGAAGGTCCAGTCGGCGAATG
TTCCGCCCACGACTGATGTGGTTACCAGTAGTCTTCCCGCTCAGCCTGAT
GGCTTTCAGC
BS15419.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 1227 | CG31633-RA | 389..1227 | 855..17 | 4170 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 472..1315 | 860..17 | 4190 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:55:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655068..6655796 | 132..860 | 3615 | 99.7 | Plus |
2L | 23513712 | 2L | 6654897..6655014 | 17..134 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 13:55:40 has no hits.
BS15419.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:22 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 384..1227 | 17..860 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:57 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 384..1227 | 17..860 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:12:17 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 472..1315 | 17..860 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:49:57 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 472..1315 | 17..860 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:49:57 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6654897..6655013 | 17..133 | 100 | <- | Plus |
2L | 6655070..6655796 | 134..860 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:12:17 Download gff for
BS15419.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6654897..6655013 | 17..133 | 100 | <- | Plus |
arm_2L | 6655070..6655796 | 134..860 | 99 | | Plus |
BS15419.5prime Sequence
291 bp (257 high quality bases) assembled on 2006-12-21
> BS15419.5prime
GAAGTTATCCCTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCNATACCTAGCCATGGATCACCTGGAGCGGTG
BS15419.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 1227 | CG31633-RA | 1..275 | 17..291 | 1356 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:48:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 87..363 | 15..291 | 1374 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:48:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655905..6656141 | 291..55 | 1174 | 99.6 | Minus |
2L | 23513712 | 2L | 6656196..6656235 | 54..15 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:48:11 has no hits.
BS15419.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:23 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 1..275 | 17..291 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:02:59 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-PA | 1..275 | 17..291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:48:23 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 87..363 | 15..291 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:46 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 87..363 | 15..291 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:46 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6655905..6656141 | 55..291 | 99 | <- | Minus |
2L | 6656196..6656235 | 15..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:48:23 Download gff for
BS15419.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6655905..6656141 | 55..291 | 99 | <- | Minus |
arm_2L | 6656196..6656235 | 15..54 | 100 | | Minus |
BS15419.complete Sequence
1259 bp assembled on 2009-08-24
GenBank Submission: KX802206
> BS15419.complete
GAAGTTATCAGTCGACATGGCACTCATTGAGAACCTCAATGATGACTGCG
TGCTTAAAATTGTAGATTACCTCGATCTGGAGGATCAGCTGAAGCTGTGG
AAGAGTTCCGAGCCCGCATCGCGACTGAGATCGCTGATATCCTACATCTG
GCAGCGCAATCGGGAATATACCATTGACTATTATACATTCAATGACGACT
ATGAGCTACTGAACGAATTCCTGCAGTGCATTCGCTTCACGGTGACGGAA
CTTACACTCCAATACCTAGCCATGGATCACCTGGAGCGGTGGAAGGGTCA
CACCTTCCCCAACATGCGTCAATTGATCTACTTGGGCGATGAGACCAGTG
AAATAGAAGGAGACGCCGACATCGCCATTCTGGTGGACTGCTTCCCGCAG
CTGGAAGCCATCAGGCTGAGCGGGAAGACTACTGGTAACCACATCAGTCG
TTGGCGGAACATTCGCCGACTGGACCTTCAGCTGTGCTGGTACCTGAGCC
CGCAGGGCTTCGAGGATATCTGTCAAAACCTGCGACTACAGACACTCAGT
ATCCAGTGGCAAAAGATCGAACAGAATGCATACGTGCGATCCATCTGTAT
GCTGCATGAACTGGAGGAGCTGGAGCTGGACATAGTTTACCTAAACAGGG
ACAACATCAGCCAACTGTTGAGCCTGCCTAAACTGATAAAGCTGCGCCTG
CACAACTTCTACCAGGTGGACGATCTACTGTGCGAAATTGGAAGCATAAG
GGGTCAAGATGTGTTGACTGCCGCATTCAGTAATAATATCTGGATGAGGC
CAACGGAGGTGCTGGCCAAACTGCGAAATCTCCGATGTTTAACTCTCGTC
GATGATGAAGGATGTGCTGCCATTGACTTTTCCACGATCACCTATTGCTT
TCCGCTCTTGGAGCAACTGCATCTGGAGAACTCGCGTATATGGGTCAACG
CCGATGGTATATGGGACGTGCTTCTTGCCTGTCCCCGTCTCAGGGAATTC
AGCATGATCAACCATGTTTTGTACGACGAGTTCTTTGCCTTCAGCAAGTC
AACAATGAACCGCGCTCTAAATCAGCGAACGAAGCCTTTGAAAATGCATT
TTTATAAAACCGGCAAGGATGACTTGGTTTCGAAGCACTTTAAACATCCC
AAACTTAATGTTTCCTTCAGTGCTACTAGTAGCAGCTATTCACAATTACC
TGACGAATGTATTGAATTGGAATTTAAACGCCCCGAGTCGTGAAAGCTTT
CTAGACCAT
BS15419.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:36:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1227 | CG31633-PA | 1..1227 | 17..1243 | 6135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:36:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-RA | 1452 | CG31633-RA | 87..1315 | 15..1243 | 6145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:36:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6655068..6656141 | 1128..55 | 5370 | 100 | Minus |
2L | 23513712 | 2L | 6654897..6655014 | 1243..1126 | 590 | 100 | Minus |
2L | 23513712 | 2L | 6656196..6656235 | 54..15 | 200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:36:19 has no hits.
BS15419.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:03:39 Download gff for
BS15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 69..1294 | 17..1242 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:52:29 Download gff for
BS15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 89..1314 | 17..1242 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:32 Download gff for
BS15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31633-RA | 89..1314 | 17..1242 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:32 Download gff for
BS15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6654898..6655013 | 1127..1242 | 100 | <- | Minus |
2L | 6655070..6656141 | 55..1126 | 100 | <- | Minus |
2L | 6656196..6656233 | 17..54 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:52:29 Download gff for
BS15419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6654898..6655013 | 1127..1242 | 100 | <- | Minus |
arm_2L | 6655070..6656141 | 55..1126 | 100 | <- | Minus |
arm_2L | 6656196..6656233 | 17..54 | 100 | | Minus |
BS15419.pep Sequence
Translation from 16 to 1242
> BS15419.pep
MALIENLNDDCVLKIVDYLDLEDQLKLWKSSEPASRLRSLISYIWQRNRE
YTIDYYTFNDDYELLNEFLQCIRFTVTELTLQYLAMDHLERWKGHTFPNM
RQLIYLGDETSEIEGDADIAILVDCFPQLEAIRLSGKTTGNHISRWRNIR
RLDLQLCWYLSPQGFEDICQNLRLQTLSIQWQKIEQNAYVRSICMLHELE
ELELDIVYLNRDNISQLLSLPKLIKLRLHNFYQVDDLLCEIGSIRGQDVL
TAAFSNNIWMRPTEVLAKLRNLRCLTLVDDEGCAAIDFSTITYCFPLLEQ
LHLENSRIWVNADGIWDVLLACPRLREFSMINHVLYDEFFAFSKSTMNRA
LNQRTKPLKMHFYKTGKDDLVSKHFKHPKLNVSFSATSSSYSQLPDECIE
LEFKRPES*
BS15419.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:35:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31633-PA | 408 | CG31633-PA | 1..408 | 1..408 | 2158 | 100 | Plus |
CG13088-PA | 401 | CG13088-PA | 1..380 | 4..384 | 365 | 29 | Plus |