Clone BS15425 Report

Search the DGRC for BS15425

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:25
Vector:pDNR-Dual
Associated Gene/Transcriptdgrn-RA
Protein status:BS15425.pep: full length peptide match
Sequenced Size:992

Clone Sequence Records

BS15425.complete Sequence

992 bp assembled on 2010-02-09

GenBank Submission: KX803205

> BS15425.complete
GAAGTTATCAGTCGACATGTCAGATTCGACTATTTTCCGTTTTAACTCAT
CCATTCTTGATCAGTCAGCGGACAGCAACGTATCCAGTTCGAGCTCCAAT
TCCAGTGTATCCGACTCTTCTGTGGACTCCCATTCATCCATAGAATCCAA
TTCGGGACACAATACATCCGTGGAATCTCAGTCATCCGCGGAATCTGATT
CATCCGCTGATTCCCATTCGTCCTTGGAACGCCCATCCCCAGTGGAGCGT
GATTTATCTGTGGAATCAGACTCATCTTCAGCCACCAATACCAGCGAATC
TTCAGTCGGAGAAGCTTCAAACCAACTGCAGTCACCGCAAAGCAATAACC
CCTTAAATATGGCTAACTTGTCTGTCTCGACTGAAGATGCTCATTCGCAG
ATCAGATCACTTACCCAGGATGTGATCCAGATGGAAGCAGAGTTGGATCG
CATGAATCGCTACTGCGAGGAAGTTGTGGCACAGATTGACACCTTCGCCA
CGAGAACCTCAACGCCAACAACTCGTAGAATTCGCCGCAGAACGAGTCCA
GTAGAAGTGATAGATCTGTCCCATTTGGACCGTGCACCACCTGTTCGATC
CGCTCGGAATCGTGATCCCGATGCTTTCATCGATCTATGCACCCCCGAAG
GCCCAAGAAGTCGCACAGTGAATCTTCACTCCAACGACTCCCTCACCATT
CTGCCACGTCGGTCAGCCGAAAATGACCCGGTAGTGGATCTCGACGTTGC
GTCGCCACCAAAACGCGTTAATCGCGACATTGATGAGTCCCAAAAAGAGG
AGTTATACAAGTGCCCCATCTGCATGGACAGTGTATCGAAGCGCGAGCCA
GTGTCAACCAAATGTGGACACGTCTTCTGCCGCGAATGCATCGAAACAGC
CATCAGAGCTACGCACAAGTGCCCAATATGCAACAAGAAGCTGACCGCAC
GTCAATTCTTTCGCATTTACTTGTAAAAGCTTTCTAGACCAT

BS15425.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 960 CG10981-PA 1..960 17..976 4800 100 Plus
dgrn-RB 939 CG10981-PB 28..939 65..976 4560 100 Plus
dgrn-RD 618 CG10981-PD 1..618 359..976 3090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:28:13
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 1632 CG10981-RA 335..1294 17..976 4800 100 Plus
dgrn-RD 1635 CG10981-RD 335..1297 17..976 4735 99.7 Plus
dgrn-RB 1611 CG10981-RB 362..1273 65..976 4560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:28:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825805..5826238 543..976 2170 100 Plus
3R 32079331 3R 5825036..5825444 44..452 2045 100 Plus
3R 32079331 3R 5825499..5825588 453..542 450 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:28:11 has no hits.

BS15425.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:29 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RA 345..1302 17..974 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:56 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 345..1302 17..974 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:21:42 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
CG10981-RA 345..1302 17..974 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:33 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 335..1292 17..974 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:33 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5824949..5824975 17..43 100 -> Plus
3R 5825036..5825444 44..452 100 -> Plus
3R 5825499..5825588 453..542 100 -> Plus
3R 5825805..5826236 543..974 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:56 Download gff for BS15425.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650671..1650697 17..43 100 -> Plus
arm_3R 1650758..1651166 44..452 100 -> Plus
arm_3R 1651221..1651310 453..542 100 -> Plus
arm_3R 1651527..1651958 543..974 100   Plus

BS15425.3prime Sequence

758 bp (687 high quality bases) assembled on 2006-12-21

> BS15425.3prime
TCCCATAAGGGGGCGCGCCAAACGAATGGCCTAGAAAGCTTTTACCTTTA
AATGCGAAAGAATTGACGTGCGGTCAGCTTCTTGTTGCATATTGGGCACT
TGTGCGTAGCTCTGATGGCTGTTTCGATGCATTCGCGGCAGAAGACGTGT
CCACATTTGGTTGACACTGGCTCGCGCTTCGATACACTGTCCATGCAGAT
GGGGCACTTGTATAACTCCTCTTTTTGGGACTCATCAATGTCGCGATTAA
CGCGTTTTGGTGGCGACGCAACGTCGAGATCCACTACCGGGTCATTTTCG
GCTGACCGACGTGGCAGAATGGTGAGGGAGTCGTTGGAGTGAAGATTCAC
TGTGCGACTTCTTGGGCCTTCGGGGGTGCATAGATCGATGAAAGCATCGG
GATCACGATTCCGAGCGGATCGAACAGGTGGTGCACGGTCCAAATGGGAC
AGATCTATCACTTCTACTGGACTCGTTCTGCGGCGAATTCTACGAGTTGT
TGGCGTTGAGGTTCTCGTGGCGAAGGTGTCAATCTGTGCCACAACTTCCT
CGCAGTAGCGATTCATGCGATCCAACTCTGCTTCCATCTGGATCACATCC
TGGGTAAGTGATCTGATCTGCGAATGAGCATCTTCAGTCGAGACAGACAA
GTTAGCCATATTTAAGGGGTTATTGCTTTGCGGTGACTGCAGTTGGTTTG
AAGCTTCTCCGACTGAAGATTCCCTGGTATTGGTGGCTGAAGATGATTCT
GATTCCAC

BS15425.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG10981-PA 960 CG10981-RA 244..953 758..49 3500 99.7 Minus
CG10981-PB 939 CG10981-RB 223..932 758..49 3500 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RB 1611 CG10981-RB 557..1266 758..49 3520 99.7 Minus
dgrn-RA 1632 CG10981-RA 578..1287 758..49 3520 99.7 Minus
dgrn-RD 1635 CG10981-RD 581..1290 758..49 3520 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825805..5826231 475..49 2135 100 Minus
3R 32079331 3R 5825252..5825444 758..566 935 99 Minus
3R 32079331 3R 5825499..5825588 565..476 450 100 Minus
Blast to na_te.dros performed on 2015-02-10 18:25:09 has no hits.

BS15425.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:31 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PB 223..939 42..758 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:10 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PB 223..939 42..758 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:01:50 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 588..1304 42..758 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:49:06 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RD 581..1297 42..758 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:49:06 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5825252..5825444 566..758 98 -> Minus
3R 5825499..5825588 476..565 100 -> Minus
3R 5825805..5826238 42..475 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:01:50 Download gff for BS15425.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650974..1651166 566..758 98 -> Minus
arm_3R 1651221..1651310 476..565 100 -> Minus
arm_3R 1651527..1651960 42..475 99   Minus

BS15425.5prime Sequence

847 bp (797 high quality bases) assembled on 2006-12-21

> BS15425.5prime
GAAGTTATCCCTTTAGATGTCAGATTCGACTATTTTCCGTTTTAACTCAT
CCATTCTTGATCAGTCAGCGGACAGCAACGTATCCAGTTCGAGCTCCAAT
TCCAGTGTATCCGACTCTTCTGTGGACTCCCATTCATCCATAGAATCCAA
TTCGGGACACAATACATCCGTGGAATCTCAGTCATCCGCGGAATCTGATT
CATCCGCTGATTCCCATTCGTCCTTGGAACGCCCATCCCCAGTGGAGCGT
GATTTATCTGTGGAATCAGACTCATCTTCAGCCACCAATACCAGCGAATC
TTCAGTCGGAGAAGCTTCAAACCAACTGCAGTCACCGCAAAGCAATAACC
CCTTAAATATGGCTAACTTGTCTGTCTCGACTGAAGATGCTCATTCGCAG
ATCAGATCACTTACCCAGGATGTGATCCAGATGGAAGCAGAGTTGGATCG
CATGAATCGCTACTGCGAGGAAGTTGTGGCACAGATTGACACCTTCGCCA
CGAGAACCTCAACGCCAACAACTCGTAGAATTCGCCGCAGAACGAGTCCA
GTAGAAGTGATAGATCTGTCCCATTTGGACCGTGCACCACCTGTTCGATC
CGCTCGGAATCGTGATCCCGATGCTTTCATCGATCTATGCACCCCCGAAG
GCCCAAGAAGTCGCACAGTGAATCTTCACTCCAACGACTCCCTCACCATT
CTGCCACGTCGGTCAGCCGAAAATGACCCGGTAGTGGATCTCGACGTTGC
GTCGCCACCAAAACGCGTTAATCGCGACATTGATGAGTCCCAAAAAGAGG
AGTTATACAAGTGCCCCATCTGCATGGACAGTGTATCGAAGCGCGAG

BS15425.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10981-PA 960 CG10981-RA 1..831 17..847 4155 100 Plus
CG10981-PB 939 CG10981-RB 28..810 65..847 3915 100 Plus
CG10981-PB 939 CG10981-RB 1..27 17..43 135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-RA 1632 CG10981-RA 335..1165 17..847 4155 100 Plus
dgrn-RD 1635 CG10981-RD 335..1168 17..847 4115 99.6 Plus
dgrn-RB 1611 CG10981-RB 362..1144 65..847 3915 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5825036..5825444 44..452 2045 100 Plus
3R 32079331 3R 5825805..5826109 543..847 1525 100 Plus
3R 32079331 3R 5825499..5825588 453..542 450 100 Plus
Blast to na_te.dros performed on 2015-02-08 07:29:54 has no hits.

BS15425.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:32 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PA 1..831 17..847 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:11 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10981-PA 1..831 17..847 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:24:53 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 345..1175 17..847 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:22:48 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
dgrn-RA 335..1165 17..847 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:22:48 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5824949..5824975 17..43 100 -> Plus
3R 5825036..5825444 44..452 100 -> Plus
3R 5825499..5825588 453..542 100 -> Plus
3R 5825805..5826109 543..847 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:24:53 Download gff for BS15425.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1650671..1650697 17..43 100 -> Plus
arm_3R 1650758..1651166 44..452 100 -> Plus
arm_3R 1651221..1651310 453..542 100 -> Plus
arm_3R 1651527..1651831 543..847 100   Plus

BS15425.pep Sequence

Translation from 16 to 975

> BS15425.pep
MSDSTIFRFNSSILDQSADSNVSSSSSNSSVSDSSVDSHSSIESNSGHNT
SVESQSSAESDSSADSHSSLERPSPVERDLSVESDSSSATNTSESSVGEA
SNQLQSPQSNNPLNMANLSVSTEDAHSQIRSLTQDVIQMEAELDRMNRYC
EEVVAQIDTFATRTSTPTTRRIRRRTSPVEVIDLSHLDRAPPVRSARNRD
PDAFIDLCTPEGPRSRTVNLHSNDSLTILPRRSAENDPVVDLDVASPPKR
VNRDIDESQKEELYKCPICMDSVSKREPVSTKCGHVFCRECIETAIRATH
KCPICNKKLTARQFFRIYL*

BS15425.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:07:38
Subject Length Description Subject Range Query Range Score Percent Strand
dgrn-PA 319 CG10981-PA 1..319 1..319 1617 100 Plus
dgrn-PB 312 CG10981-PB 1..312 1..319 1566 97.8 Plus
dgrn-PD 205 CG10981-PD 1..205 115..319 1070 100 Plus
CG43058-PA 100 CG43058-PA 10..100 194..319 214 35.7 Plus
elfless-PC 229 CG15150-PC 42..229 156..319 183 30.7 Plus