Clone BS15429 Report

Search the DGRC for BS15429

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:29
Vector:pDNR-Dual
Associated Gene/Transcriptfon-RB
Protein status:BS15429.pep: full length peptide match
Sequenced Size:1766

Clone Sequence Records

BS15429.complete Sequence

1766 bp assembled on 2009-12-07

GenBank Submission: KX803520

> BS15429.complete
GAAGTTATCCCTCGACATGAATAAGCTGCTGATTTTGGCCCTTTGCCTGG
GTGTGGTCTGTGGAGATTTCCAACAAAGTTTGGGGAGAACCAAACGTGAC
AGTTTCCACTCTCGCCACTACAGTACCCACGGACAAGCGGTGGAGCAGGC
TCGCAAGAACGCCGGCTACGGTGGAGGTTATAGCGGTAGCTTTGGAGCTG
GCGTCGATGGCGCCTCCGCTCAGGTTGATGACTCTGCTCTGGGAAAACTC
GAGAGCTCCTACGACTCCGTGGGTGCGACTGAATCCGCCGAAGGTGCCTC
CGCTGGCGGATTAGGTGGTGCCGTTGAGACTTTGGGTGGTTCTGCTGGTA
CGAACACCATTGGTGCTGGTGTTGGAAGTTCCTTCGGCTCTAACTTTGCC
TCCGGTTTTGGCGGCCAGAATGCTGCCTCCTTTGGCGCTCAGAATGCTGC
TGGCTTTGGCGCCCAGAATGCCGCCTCCTTTGGCGCCCAGAATGCTGCCT
CCTTCGGTAGCTCCTTCTCCAGCAACGCCGCCTTTCAGACCAGCTCCGCC
TCCAACTTCGGCAGCACCGCCGCTCACCAGGTGGGCAGCAATGTGGAGTT
TGCTGATAACGCCAATGCCGGCAACAAGGTTGACTTTGGTGGCGTAAACG
CCGTGGACTCCAGTGCTCAGCTGCTCAGCGGAGTTCAAACCGTGCAGTCC
GTCCCCACTTCCGAGTATTACAGGCACGAGAAGATTGTGTCCACCCCGCA
ACAGGTGGTCTACACCATTCCCGGTGGCTCCCAGCGTTACGTTCATCACG
AGGAACGTATCGTTGAACAGCCTACCCAGGTGACCCAGACGGTCCCAGTT
CAAACCGCACACTACTATCAACGAAAGGTGACCACCACTGCGTCCGCACC
ACAGCTGGTTCAGCCAGTTGCCAGCAGCCGTTTGACTTACGGATCGAATG
CCGCCTCCACCTTTGGCAGCAATGCTGCCTCCAACTTCGGCAGCAATGCC
GCCACCAACTTCGGCAGCAATGCCGCCACCAACTTCGGCAGCAATGCCGC
CTTTAACTCTCAGTTTGGCAGTTCTTATGGCCAGAACTTCCAGCAGAACA
GCCAGCTGAGCCAGCTGCTCAGCCAAACCCAGCAAGCTGCCCGTCAGCAG
GCTGCCTTACAAGCCGCATCCGCCAACCAGGTGCAAGCTGGAAGTGGCTA
CGCCGCCGGCTCACAAGGTGGCTTTAACTCTGGCTACAACTCCGCCTTCA
ACTCTGGCTCCCAGTTTGGATTCAACTCCGCTAGCTCTTTGAACTCTGCC
AGCTCCCTGAACTCCGCCAGTACCGGTAACAGCGCAGCTCTACTGAGTGG
ATCTCTGTTGGGCGGCAGCCAAGGATCTCTGCTGAGCGGACAGGTTGGCG
GACAGCAGTCGCTGCTCAGTGGATCCCTATTAAGCGGACAGCAGAACTTG
GGACTTGGACTGAACGCGGCACAGACCGGTCAAGTGGTTGGAGCTAGCAG
CGTTGGGGCCGGATTATCAGCAGGAGCCGGAAACTTGGGCAGTGGCTACC
GTACCAAGCAGTGGGAGAAGCAGTCCAAGTGGTCTTCCCAGAACTCGTAC
GATTCCAATGGCCATGTCAACAACTACAAGGATCTAGTCACCGGCGAGAG
CGAAAGTGTTGATATCAATGGCAAGCGGGCGGGATACCATGCGGTGACAG
CCTCCGTCGATGACAACGGCAAGATTGGCACCCACAGTGTTCACTCGTAA
AAGCTTTCTAGACCAT

BS15429.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
fon-RC 1734 CG15825-PC 1..1734 17..1750 8670 100 Plus
fon-RB 1734 CG15825-PB 1..1734 17..1750 8670 100 Plus
fon-RD 1725 CG15825-PD 1..1725 17..1750 8500 99.5 Plus
fon-RC 1734 CG15825-PC 931..1011 971..1051 330 93.8 Plus
fon-RC 1734 CG15825-PC 955..1035 947..1027 330 93.8 Plus
fon-RB 1734 CG15825-PB 931..1011 971..1051 330 93.8 Plus
fon-RB 1734 CG15825-PB 955..1035 947..1027 330 93.8 Plus
fon-RC 1734 CG15825-PC 931..987 995..1051 210 91.2 Plus
fon-RC 1734 CG15825-PC 979..1035 947..1003 210 91.2 Plus
fon-RB 1734 CG15825-PB 931..987 995..1051 210 91.2 Plus
fon-RB 1734 CG15825-PB 979..1035 947..1003 210 91.2 Plus
fon-RC 1734 CG15825-PC 391..464 431..504 205 85.1 Plus
fon-RC 1734 CG15825-PC 415..488 407..480 205 85.1 Plus
fon-RB 1734 CG15825-PB 391..464 431..504 205 85.1 Plus
fon-RB 1734 CG15825-PB 415..488 407..480 205 85.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:30:30
Subject Length Description Subject Range Query Range Score Percent Strand
fon-RC 1925 CG15825-RC 71..1805 17..1751 8675 100 Plus
fon-RB 2276 CG15825-RB 71..1805 17..1751 8675 100 Plus
fon-RD 1916 CG15825-RD 71..1796 17..1751 8505 99.5 Plus
fon-RC 1925 CG15825-RC 1001..1081 971..1051 330 93.8 Plus
fon-RC 1925 CG15825-RC 1025..1105 947..1027 330 93.8 Plus
fon-RB 2276 CG15825-RB 1001..1081 971..1051 330 93.8 Plus
fon-RB 2276 CG15825-RB 1025..1105 947..1027 330 93.8 Plus
fon-RC 1925 CG15825-RC 1001..1057 995..1051 210 91.2 Plus
fon-RC 1925 CG15825-RC 1049..1105 947..1003 210 91.2 Plus
fon-RB 2276 CG15825-RB 1001..1057 995..1051 210 91.2 Plus
fon-RB 2276 CG15825-RB 1049..1105 947..1003 210 91.2 Plus
fon-RC 1925 CG15825-RC 461..534 431..504 205 85.1 Plus
fon-RC 1925 CG15825-RC 485..558 407..480 205 85.1 Plus
fon-RB 2276 CG15825-RB 461..534 431..504 205 85.1 Plus
fon-RB 2276 CG15825-RB 485..558 407..480 205 85.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19383881..19385364 1597..114 7420 100 Minus
2L 23513712 2L 19383609..19383763 1751..1597 775 100 Minus
2L 23513712 2L 19384427..19384507 1027..947 330 93.8 Minus
2L 23513712 2L 19384451..19384531 1051..971 330 93.8 Minus
2L 23513712 2L 19386087..19386135 65..17 245 100 Minus
2L 23513712 2L 19384427..19384483 1003..947 210 91.2 Minus
2L 23513712 2L 19384475..19384531 1051..995 210 91.2 Minus
2L 23513712 2L 19384974..19385047 480..407 205 85.1 Minus
2L 23513712 2L 19384998..19385071 504..431 205 85.1 Minus
2L 23513712 2L 19385670..19385709 114..75 200 100 Minus
Blast to na_te.dros performed 2014-11-28 02:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2461..2648 853..1044 118 56.7 Plus

BS15429.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:50:51 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
fon-RB 68..1799 17..1748 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:45 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
fon-RB 71..1802 17..1748 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:56:16 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
fon-RB 68..1799 17..1748 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:55 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
fon-RB 71..1802 17..1748 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:55 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19383612..19383762 1598..1748 100 <- Minus
2L 19383881..19385363 115..1597 100 <- Minus
2L 19385670..19385714 66..114 89 <- Minus
2L 19386087..19386135 17..65 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:45 Download gff for BS15429.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19383612..19383762 1598..1748 100 <- Minus
arm_2L 19383881..19385363 115..1597 100 <- Minus
arm_2L 19385670..19385714 66..114 89 <- Minus
arm_2L 19386087..19386135 17..65 100   Minus

BS15429.3prime Sequence

763 bp (713 high quality bases) assembled on 2006-12-21

> BS15429.3prime
ATGGTCTAGAAAGCTTTTACCATTGAACACTGTGGGTGCCAATCTTGCCG
TTGTCATCGACGGAGGCTGTCACCGCATGGTATCCCGCCCGCTTGCCATT
GATATCAACACTTTCGCTCTCGCCGGTGACTAGATCCTTGTAGTTGTTGA
CATGGCCATTGGAATCGTACGAGTTCTGGGAAGACCACTTGGACTGCTTC
TCCCACTGCTTGGTACGGTAGCCACTGCCCAAGTTTCCGGCTCCTGCTGA
TAATCCGGCCCCAACGCTGCTAGCTCCAACCACTTGACCGGTCTGTGCCG
CGTTCAGTCCAAGTCCCAAGTTCTGCTGTCCGCTTAATAGGGATCCACTG
AGCAGCGACTGCTGTCCGCCAACCTGTCCGCTCAGCAGAGATCCTTGGCT
GCCGCCCAACAGAGATCCACTCAGTAGAGCTGCGCTGTTACCGGTACTGG
CGGAGTTCAGGGAGCTGGCAGAGTTCAAAGAGCTAGCGGAGTTGAATCCA
AACTGGGAGCCAGAGTTGAAGGCGGAGTTGTAGCCAGAGTTAAAGCCACC
TTGTGAGCCGGCGGCGTAGCCACTTCCAGCTTGCACCTGGTTGGCGGATG
CGGCTTGTAAGGCAGCCTGCTGACGGGCAGCTTGCTGGGTTTGGCTGAGC
AGCTGGCTCAGCTGGCTGTTCTGCTGGAAGTTCTGGCCATAAGAACTGCC
AAACTGAGAGTTAAAGGCGGCATTGCTGCCGAAGTTGGTGGCGGCATTGC
TGCCGAAGTTGGT

BS15429.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG15825-PB 1734 CG15825-RB 988..1727 763..24 3700 100 Minus
CG15825-PA 1698 CG15825-RA 952..1691 763..24 3700 100 Minus
CG15825-PB 1734 CG15825-RB 965..1011 762..716 235 100 Minus
CG15825-PA 1698 CG15825-RA 929..975 762..716 235 100 Minus
CG15825-PB 1734 CG15825-RB 949..987 754..716 145 94.8 Minus
CG15825-PA 1698 CG15825-RA 913..951 754..716 145 94.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
fon-RD 1916 CG15825-RD 1049..1796 763..16 3710 99.7 Minus
fon-RC 1925 CG15825-RC 1058..1805 763..16 3710 99.7 Minus
fon-RA 1991 CG15825-RA 1022..1769 763..16 3710 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:12:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19383881..19384474 170..763 2970 100 Plus
2L 23513712 2L 19383609..19383763 16..170 745 98.7 Plus
2L 23513712 2L 19384451..19384497 716..762 235 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:12:57 has no hits.

BS15429.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:40 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15825-PA 952..1698 17..763 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:23 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15825-PA 952..1698 17..763 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:25:48 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
fon-RA 1022..1776 7..763 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:50:37 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
fon-RA 1022..1776 7..763 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:50:37 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19383602..19383762 7..169 96 <- Plus
2L 19383881..19384474 170..763 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:25:48 Download gff for BS15429.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19383602..19383762 7..169 96 <- Plus
arm_2L 19383881..19384474 170..763 100   Plus

BS15429.5prime Sequence

874 bp (812 high quality bases) assembled on 2006-12-21

> BS15429.5prime
GAAGTTATCCCTCGACATGAATAAGCTGCTGATTTTGGCCCTTTGCCTGG
GTGTGGTCTGTGGAGATTTCCAACAAAGTTTGGGGAGAACCAAACGTGAC
AGTTTCCACTCTCGCCACTACAGTACCCACGGACAAGCGGTGGAGCAGGC
TCGCAAGAACGCCGGCTACGGTGGAGGTTATAGCGGTAGCTTTGGAGCTG
GCGTCGATGGCGCCTCCGCTCAGGTTGATGACTCTGCTCTGGGAAAACTC
GAGAGCTCCTACGACTCCGTGGGTGCGACTGAATCCGCCGAAGGTGCCTC
CGCTGGCGGATTAGGTGGTGCCGTTGAGACTTTGGGTGGTTCTGCTGGTA
CGAACACCATTGGTGCTGGTGTTGGAAGTTCCTTCGGCTCTAACTTTGCC
TCCGGTTTTGGCGGCCAGAATGCTGCCTCCTTTGGCGCTCAGAATGCTGC
TGGCTTTGGCGCCCAGAATGCCGCCTCCTTTGGCGCCCAGAATGCTGCCT
CCTTCGGTAGCTCCTTCTCCAGCAACGCCGCCTTTCAGACCAGCTCCGCC
TCCAACTTCGGCAGCACCGCCGCTCACCAGGTGGGCAGCAATGTGGAGTT
TGCTGATAACGCCAATGCCGGCAACAAGGTTGACTTTGGTGGCGTAAACG
CCGTGGACTCCAGTGCTCAGCTGCTCAGCGGAGTTCAAACCGTGCAGTCC
GTCCCCACTTCCGAGTATTACAGGCACGAGAAGATTGTGTCCACCCCGCA
ACAGGTGGTCTACACCATTCCCGGTGGCTCCCAGCGTTACGTTCATCACG
AGGAACGTATCGTTGAACAGCCTACCCAGGTGACCCAGACGGTCCCAGTT
CAAACCGCACACTACTATCAACAA

BS15429.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15825-PB 1734 CG15825-RB 1..856 17..872 4280 100 Plus
CG15825-PA 1698 CG15825-RA 62..820 114..872 3795 100 Plus
CG15825-PA 1698 CG15825-RA 1..62 17..78 310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
fon-RC 1925 CG15825-RC 71..926 17..872 4280 100 Plus
fon-RB 2276 CG15825-RB 71..926 17..872 4280 100 Plus
fon-RD 1916 CG15825-RD 71..917 17..872 4135 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19384606..19385364 872..114 3795 100 Minus
2L 23513712 2L 19386087..19386135 65..17 245 100 Minus
2L 23513712 2L 19384974..19385047 480..407 205 85.1 Minus
2L 23513712 2L 19384998..19385071 504..431 205 85.1 Minus
2L 23513712 2L 19385670..19385709 114..75 200 100 Minus
Blast to na_te.dros performed on 2015-02-11 15:47:56 has no hits.

BS15429.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:41 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15825-PB 1..856 17..872 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:25 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15825-PB 1..856 17..872 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:48:19 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
fon-RB 71..926 17..872 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:44 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
fon-RB 71..926 17..872 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:44 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19384606..19385363 115..872 100 <- Minus
2L 19385670..19385707 75..114 95 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:48:19 Download gff for BS15429.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19384606..19385363 115..872 100 <- Minus
arm_2L 19385670..19385707 75..114 95 -> Minus

BS15429.pep Sequence

Translation from 16 to 1749

> BS15429.pep
MNKLLILALCLGVVCGDFQQSLGRTKRDSFHSRHYSTHGQAVEQARKNAG
YGGGYSGSFGAGVDGASAQVDDSALGKLESSYDSVGATESAEGASAGGLG
GAVETLGGSAGTNTIGAGVGSSFGSNFASGFGGQNAASFGAQNAAGFGAQ
NAASFGAQNAASFGSSFSSNAAFQTSSASNFGSTAAHQVGSNVEFADNAN
AGNKVDFGGVNAVDSSAQLLSGVQTVQSVPTSEYYRHEKIVSTPQQVVYT
IPGGSQRYVHHEERIVEQPTQVTQTVPVQTAHYYQRKVTTTASAPQLVQP
VASSRLTYGSNAASTFGSNAASNFGSNAATNFGSNAATNFGSNAAFNSQF
GSSYGQNFQQNSQLSQLLSQTQQAARQQAALQAASANQVQAGSGYAAGSQ
GGFNSGYNSAFNSGSQFGFNSASSLNSASSLNSASTGNSAALLSGSLLGG
SQGSLLSGQVGGQQSLLSGSLLSGQQNLGLGLNAAQTGQVVGASSVGAGL
SAGAGNLGSGYRTKQWEKQSKWSSQNSYDSNGHVNNYKDLVTGESESVDI
NGKRAGYHAVTASVDDNGKIGTHSVHS*

BS15429.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
fon-PC 577 CG15825-PC 1..577 1..577 2908 100 Plus
fon-PB 577 CG15825-PB 1..577 1..577 2908 100 Plus
fon-PD 574 CG15825-PD 1..574 1..577 2875 99.5 Plus
fon-PA 565 CG15825-PA 1..565 1..577 2822 97.9 Plus
Mur89F-PC 2158 CG4090-PC 537..1028 43..528 211 21.7 Plus