Clone BS15430 Report

Search the DGRC for BS15430

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG45076-RA
Protein status:BS15430.pep: full length peptide match
Sequenced Size:1892

Clone Sequence Records

BS15430.complete Sequence

1892 bp assembled on 2009-12-07

GenBank Submission: KX802357

> BS15430.complete
GAAGTTATCAGTCGACATGGTTTACGAAAGTGGATTTACGACCCGCAGAA
CCTACTCCTCGAGGCCGGTGACAACTTCCTACGCAGTTACGTACCCCTCG
GTCGAGAAAGTAACTCGTGTGTACAAGTCGAGTTACCCCATCTACTCGAG
CTACTCGGTGCCACGCCGCGTCTACGGCGCAACCCGGGTGGTGACCTCGC
CCATCCGCGTGGTAACCTCGCCTGCCCGCGTGGTGTCCCGCGTCATACAC
TCACCATCGCCTGTTCGCGTTGTCCGCACGACGACCCGAGTGATTTCATC
GCCGGAGCGCACCACCTACTCCTACACCACGCCATCGACCTACTACAGCC
CCTCCTACTTGCCATCGACCTACACTTCGACCTACATCCCGACATCGTAC
ACCACGTACACGCCGTCCTACGCCTACAGCCCGACCACGGTCACCCGGGT
GTATGCCCCACGCAGTTCGCTGTCGCCGCTGAGGATCACCCCCTCGCCGG
TGAGGGTCATCACCAGCCCGGTTCGCTCTGTGCCCTCCTATCTGAAGAGG
CTGCCGCCTGGTTACGGTGCCCGCGCCCTGACCAATTACCTCAATACCGA
ACCCTTTACCACCTTCTCCGAGGAAACAAGCCGGATTCGCAACCGCGCGC
AATCTCTGATTCGTGACTTGCACACTCCCGTGGTGCGCCGTGCACGTAGC
TGCACTCCCTTTCCCGTCACTGGTTACACCTATGAGCCGGCCTCGCAACT
GGCCCTAGATGCCTATGTGGCCCGTGTCACAAATCCTGTCCGTCATATTG
CCAAGGAAGTTCACAATATTTCGCACTACCCCAGGCCAGCAGTGAAATAT
GTTGATGCCGAGTTGGATCCTAACCGTCCATCTAGAAAATTTTCTGCCCC
TAGGCCCCTGGAGGATCCCCTCGATGTGGAGGCCAAGGAGAAACAGCGTC
TGCGCCAGGAGCGTCTTCTAACCGTTAACGAAGAGGCTCTCGACGAGGTG
GACTTGGAAAAGAAGCGTGCCCAGAAAGCCGATGAAGCCAAGCGTAGGGA
AGAGAGGGCTCTCAAGGAGGAGAGGGATCGCCTGACGGCTGAGGCCGAAA
AGCAGGCTGCTGCTAAGGCCAAAAAGGCTGCCGAGGAGGCCGCCAAAATC
GCTGCCGAAGAGGCTCTCCTGGCTGAAGCTGCCGCCCAAAAAGCAGCCGA
AGAAGCTAAAGCCCTAAAAGCCGCTGAAGATGCTGCCCAGAAAGCTGCCG
AAGAAGCGCGTCTAGCGGAGGAGGCTGCCGCCCAAAAGGTCGCCGAGGAA
GCTGCCCAAAAAGCTGCTGAGGAAGCTCGCCTAGCAGAGGAGGCAGCCGC
CCAAAAGGCCGCCGAGGAAGCTGCCCAAAAGGCTGCCGAAGAAGCCGCTT
TAAAGGCAGCCGAAGAGGCTCGTCTGGCTGAAGAAGCTGCCCAAAAGGCC
GCCGAAGAAGCCGCACTGAAGGCTGTAGAGGAGGCTCGTGCCGCCGAAGA
AGCTGCCCAAAAGGCCGCCGAAGAGGCTCGTGTCGCTGAAGAGGCTCGCC
TGGAGGAGGAGCAGCGTGTCCGTGAGCAGGAGCTGGAGCGCCTGGCGGAG
ATCGAGAAGGAGAGTGAGGGAGAACTTGCTCGCCAGGCCGCCGAGCTGGC
CGAGATCGCCCGCCAGGAATCCGAGCTTGCCGCCCAGGAACTGCAGGCCA
TCCAGAAGAACGAGAACGAGACCAGCGAGCCTGTGGTCGAAGAGCCCGTC
ACGCCCGTTGAGGAACAGGAACCGATCATCGAGCTCGGCTCTAATGTTAC
CCCCACTGGTGGTAATAGCTACGAGGAGGATCTCGATGCGGAGGAGGAGG
AGGACGAGGAAGAGGAGGAGGAATAGAAGCTTTCTAGACCAT

BS15430.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:47:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 1860 CG45076-PH 1..1860 17..1876 9300 100 Plus
CG45076-RA 1860 CG45076-PA 1..1860 17..1876 9300 100 Plus
CG45076-RI 1032 CG45076-PI 1..838 17..854 4190 100 Plus
CG45076-RH 1860 CG45076-PH 1195..1442 1280..1524 395 78.2 Plus
CG45076-RH 1860 CG45076-PH 1264..1508 1211..1458 395 78.2 Plus
CG45076-RA 1860 CG45076-PA 1195..1442 1280..1524 395 78.2 Plus
CG45076-RA 1860 CG45076-PA 1264..1508 1211..1458 395 78.2 Plus
CG45076-RH 1860 CG45076-PH 1102..1190 1373..1461 205 82 Plus
CG45076-RH 1860 CG45076-PH 1357..1445 1118..1206 205 82 Plus
CG45076-RA 1860 CG45076-PA 1102..1190 1373..1461 205 82 Plus
CG45076-RA 1860 CG45076-PA 1357..1445 1118..1206 205 82 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 2199 CG45076-RH 122..1984 15..1877 9315 100 Plus
CG45076-RA 2034 CG45076-RA 122..1984 15..1877 9315 100 Plus
CG45076-RI 2109 CG45076-RI 122..961 15..854 4200 100 Plus
CG45076-RH 2199 CG45076-RH 1318..1565 1280..1524 395 78.2 Plus
CG45076-RH 2199 CG45076-RH 1387..1631 1211..1458 395 78.2 Plus
CG45076-RA 2034 CG45076-RA 1318..1565 1280..1524 395 78.2 Plus
CG45076-RA 2034 CG45076-RA 1387..1631 1211..1458 395 78.2 Plus
CG45076-RH 2199 CG45076-RH 1225..1313 1373..1461 205 82 Plus
CG45076-RH 2199 CG45076-RH 1480..1568 1118..1206 205 82 Plus
CG45076-RA 2034 CG45076-RA 1225..1313 1373..1461 205 82 Plus
CG45076-RA 2034 CG45076-RA 1480..1568 1118..1206 205 82 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10768216..10769038 1877..1055 4115 100 Minus
3R 32079331 3R 10772113..10772604 610..119 2460 100 Minus
3R 32079331 3R 10769101..10769304 1057..854 1020 100 Minus
3R 32079331 3R 10771337..10771468 854..723 660 100 Minus
3R 32079331 3R 10771860..10771972 723..611 565 100 Minus
3R 32079331 3R 10768569..10768813 1458..1211 395 78.2 Minus
3R 32079331 3R 10768635..10768882 1524..1280 395 78.2 Minus
3R 32079331 3R 10777177..10777253 91..15 385 100 Minus
3R 32079331 3R 10768632..10768720 1206..1118 205 82 Minus
3R 32079331 3R 10768887..10768975 1461..1373 205 82 Minus
Blast to na_te.dros performed on 2014-11-28 01:47:12 has no hits.

BS15430.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:16 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 111..1970 17..1876 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:57:41 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 124..1983 17..1876 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:57:02 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
fau-RA 111..1970 17..1876 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:56:44 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
CG45076-RA 124..1983 17..1876 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:56:44 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10768217..10769036 1057..1876 100 <- Minus
3R 10769102..10769303 855..1056 100 <- Minus
3R 10771337..10771467 724..854 100 <- Minus
3R 10771860..10771972 611..723 100 <- Minus
3R 10772113..10772604 119..610 100 <- Minus
3R 10773135..10773161 92..118 100 <- Minus
3R 10777177..10777251 17..91 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:57:41 Download gff for BS15430.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6593939..6594758 1057..1876 100 <- Minus
arm_3R 6594824..6595025 855..1056 100 <- Minus
arm_3R 6597059..6597189 724..854 100 <- Minus
arm_3R 6597582..6597694 611..723 100 <- Minus
arm_3R 6597835..6598326 119..610 100 <- Minus
arm_3R 6598857..6598883 92..118 100 <- Minus
arm_3R 6602899..6602973 17..91 100   Minus

BS15430.3prime Sequence

761 bp (671 high quality bases) assembled on 2006-12-21

> BS15430.3prime
ATGGTCTAGAAAGCTTCTATTCTTCCTCCTCTTCCTCGTCCTCCTCCTCC
TCCGCATCGAGATCCTCCTCGTAGCTATTACCACCAGTGGGGGTAACATT
AGAGCCGAGCTCGATGATCGGTTCCTGTTCCTCAACGGGCGTGACGGGCT
CTTCGACCACAGGCTCGCTGGTCTCGTTCTCGTTCTTCTGGATGGCCTGC
AGTTCCTGGGCGGCAAGCTCGGATTCCTGGCGGGCGAGCTCGGCCCGCTC
GGCGGCCTGGCGAGCAAGTTCTCCCTCACTCTCCTTCTCGATCTCCGCCA
GGCGCTCCAGCTCCTGCTCACGGACACGCTGCTCCTCCTCCAGGCGAGCC
TCTTCAGCGACACGAGCCTCTTCGGCGGCCTTTTGGGCAGCTTCTTCGGC
GGCACGAGCCTCCTCTACAGCCTTCAGTGCGGCTTCTTCGGCGGCCTTTT
GGGCAGCTTCTTCAGCCAGACGAGCCTCTTCGGCTGCCTTTAAAGCGGCT
TCTTCGGCAGCCTTTTGGGCAGCTTCCTCGGCGGCCTTTTGGGCGGCTGC
CTCCTCTGCTAGGCGAGCTTCCTCAGCAGCTTTTTGGGCAGCTTCCTCGG
CGACCTTTTGGGCGGCAGCCTCCTCCGCTAGACGCGCTTCTTCGGCAGCT
TTCTGGGCAGCATCTTCAGCGGCTTTTAGGGCTTTAGCTTCTTCGGCTGC
TTTTTGGGCGGCAGCTTCAGCCAGGAGAGCCTCTTCGGCAGCGATTTTGG
CGGCCTCCTCG

BS15430.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6544-PA 1860 fau-RA 1116..1860 761..17 3650 99.5 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 21:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RH 2199 CG45076-RH 1239..1984 761..16 3685 99.6 Minus
CG45076-RA 2034 CG45076-RA 1239..1984 761..16 3685 99.6 Minus
CG45076-RH 2199 CG45076-RH 1318..1565 613..369 465 80.7 Minus
CG45076-RH 2199 CG45076-RH 1387..1631 682..435 465 80.7 Minus
CG45076-RA 2034 CG45076-RA 1318..1565 613..369 465 80.7 Minus
CG45076-RA 2034 CG45076-RA 1387..1631 682..435 465 80.7 Minus
CG45076-RH 2199 CG45076-RH 1225..1479 613..365 240 74.4 Minus
CG45076-RA 2034 CG45076-RA 1225..1479 613..365 240 74.4 Minus
CG45076-RH 2199 CG45076-RH 1401..1635 761..521 215 74.2 Minus
CG45076-RA 2034 CG45076-RA 1401..1635 761..521 215 74.2 Minus
CG45076-RH 2199 CG45076-RH 1225..1313 520..432 205 82 Minus
CG45076-RA 2034 CG45076-RA 1225..1313 520..432 205 82 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 21:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10768216..10768961 16..761 3685 99.6 Plus
3R 32079331 3R 10768569..10768813 435..682 395 78.2 Plus
3R 32079331 3R 10768635..10768882 369..613 395 78.2 Plus
3R 32079331 3R 10768887..10768975 432..520 205 82 Plus
Blast to na_te.dros performed on 2015-02-05 21:27:49 has no hits.

BS15430.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:42 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1116..1860 17..761 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:27 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1116..1860 17..761 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:20:29 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
fau-RA 1239..1989 7..761 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:22:18 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
CG45076-RA 1239..1989 7..761 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:22:18 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10768211..10768961 7..761 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:20:29 Download gff for BS15430.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6593933..6594683 7..761 99   Plus

BS15430.5prime Sequence

843 bp (778 high quality bases) assembled on 2006-12-21

> BS15430.5prime
GAAGTTATCCGTCGACATGGTTTACGAAAGTGGATTTACGACCCGCAGAA
CCTACTCCTCGAGGCCGGTGACAACTTCCTACGCAGTTACGTACCCCTCG
GTCGAGAAAGTAACTCGTGTGTACAAGTCGAGTTACCCCATCTACTCGAG
CTACTCGGTGCCACGCCGCGTCTACGGCGCAACCCGGGTGGTGACCTCGC
CCATCCGCGTGGTAACCTCGCCTGCCCGCGTGGTGTCCCGCGTCATACAC
TCACCATCGCCTGTTCGCGTTGTCCGCACGACGACCCGAGTGATTTCATC
GCCGGAGCGCACCACCTACTCCTACACCACGCCATCGACCTACTACAGCC
CCTCCTACTTGCCATCGACCTACACTTCGACCTACATCCCGACATCGTAC
ACCACGTACACGCCGTCCTACGCCTACAGCCCGACCACGGTCACCCGGGT
GTATGCCCCACGCAGTTCGCTGTCGCCGCTGAGGATCACCCCCTCGCCGG
TGAGGGTCATCACCAGCCCGGTTCGCTCTGTGCCCTCCTATCTGAAGAGG
CTGCCGCCTGGTTACGGTGCCCGCGCCCTGACCAATTACCTCAATACCGA
ACCCTTTACCACCTTCTCCGAGGAAACAAGCCGGATTCGCAACCGCGCGC
AATCTCTGATTCGTGACTTGCACACTCCCGTGGTGCGCCGTGCACGTAGC
TGCACTCCCTTTCCCGTCACTGGTTACACCTATGAGCCGGCCTCGCAACT
GGCCCTAGATGCCTATGTGGCCCGTGTCACAAATCCTGTCCGTCATATTG
CCAAGGAAGTTCACAATATTTCGCACTACCCCAGGCCAGCAGT

BS15430.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG6544-PA 1860 fau-RA 1..827 17..843 4135 100 Plus
CG6544-PD 297 fau-RD 1..104 17..120 520 100 Plus
CG6544-PC 396 fau-RC 1..75 17..91 375 100 Plus
CG6544-PB 492 fau-RB 1..75 17..91 375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-RI 2109 CG45076-RI 122..950 15..843 4145 100 Plus
CG45076-RH 2199 CG45076-RH 122..950 15..843 4145 100 Plus
CG45076-RE 1215 CG45076-RE 122..950 15..843 4145 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10772113..10772604 610..119 2460 100 Minus
3R 32079331 3R 10771348..10771468 843..723 605 100 Minus
3R 32079331 3R 10771860..10771972 723..611 565 100 Minus
3R 32079331 3R 10777177..10777253 91..15 385 100 Minus
Blast to na_te.dros performed on 2015-02-02 14:08:08 has no hits.

BS15430.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:26:43 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1..827 17..843 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:03:28 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6544-PA 1..827 17..843 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:14:43 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
fau-RA 116..950 7..843 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:51:38 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
CG45076-RE 116..950 7..843 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:51:38 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10771348..10771467 724..843 100 <- Minus
3R 10771860..10771972 611..723 100 <- Minus
3R 10772113..10772604 119..610 100 <- Minus
3R 10773135..10773161 92..118 100 <- Minus
3R 10777177..10777259 7..91 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:14:43 Download gff for BS15430.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6597070..6597189 724..843 100 <- Minus
arm_3R 6597582..6597694 611..723 100 <- Minus
arm_3R 6597835..6598326 119..610 100 <- Minus
arm_3R 6598857..6598883 92..118 100 <- Minus
arm_3R 6602899..6602981 7..91 96   Minus

BS15430.pep Sequence

Translation from 16 to 1875

> BS15430.pep
MVYESGFTTRRTYSSRPVTTSYAVTYPSVEKVTRVYKSSYPIYSSYSVPR
RVYGATRVVTSPIRVVTSPARVVSRVIHSPSPVRVVRTTTRVISSPERTT
YSYTTPSTYYSPSYLPSTYTSTYIPTSYTTYTPSYAYSPTTVTRVYAPRS
SLSPLRITPSPVRVITSPVRSVPSYLKRLPPGYGARALTNYLNTEPFTTF
SEETSRIRNRAQSLIRDLHTPVVRRARSCTPFPVTGYTYEPASQLALDAY
VARVTNPVRHIAKEVHNISHYPRPAVKYVDAELDPNRPSRKFSAPRPLED
PLDVEAKEKQRLRQERLLTVNEEALDEVDLEKKRAQKADEAKRREERALK
EERDRLTAEAEKQAAAKAKKAAEEAAKIAAEEALLAEAAAQKAAEEAKAL
KAAEDAAQKAAEEARLAEEAAAQKVAEEAAQKAAEEARLAEEAAAQKAAE
EAAQKAAEEAALKAAEEARLAEEAAQKAAEEAALKAVEEARAAEEAAQKA
AEEARVAEEARLEEEQRVREQELERLAEIEKESEGELARQAAELAEIARQ
ESELAAQELQAIQKNENETSEPVVEEPVTPVEEQEPIIELGSNVTPTGGN
SYEEDLDAEEEEDEEEEEE*

BS15430.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG45076-PH 619 CG45076-PH 1..619 1..619 3044 100 Plus
CG45076-PA 619 CG45076-PA 1..619 1..619 3044 100 Plus
CG45076-PI 343 CG45076-PI 1..279 1..279 1440 100 Plus
CG45076-PE 343 CG45076-PE 1..279 1..279 1440 100 Plus
CG6209-PA 607 CG6209-PA 256..546 305..568 273 34.7 Plus