Clone BS15451 Report

Search the DGRC for BS15451

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptdah-RA
Protein status:BS15451.pep: full length peptide match
Sequenced Size:1982

Clone Sequence Records

BS15451.complete Sequence

1982 bp assembled on 2009-12-07

GenBank Submission: KX805020

> BS15451.complete
GAAGTTATCAGTCGACATGCTGAGATCGTCGGTGCCCGTGCAGCTGACAA
AACTGCGAAATAGCGCCGAGGCCGTGGCGTCCATTGCCCGCGAAAAGGGA
TCCCAAGGTGGCCAAGGACAAAAGCAACAGGTGGACAAAGAGCTATCCAC
CATCATGGATGACTTGCAGCGGGATTACGGGAATTACAAGTACACGGTAT
ACCGGTGCGCCAGTAAATTTGTGGCGCTGCAAAAGATATTTCACACTGGA
AAAATCCCCTACAAGCTGGTTTTGGCCATTTTGGATCGCCATAACTTGAG
TGGTGGCCTGGAACTGATGGTTCCTCCATTCCAGTTGACCTCCCTGCTGC
ACGATGTATACTTTGCCTGCGAGAAACTAGGCCATTTCAACCAGGATGCG
AACTATAAACTGGACAGGGCAACCGGGCTGTTGGCCAACTTCTTCTGGAA
TGTCTACGATCCGCAACGCAGACACTCCATATCCCTGTTAGAGATCAGGA
TCACCTTCATACTGCTGTGCAAGCTATATAGCAGCGATCACCTGGTGGGC
GACATCTTTGGCCTGCTGGCCGATCCCAAGTCGCAGATCATCTCCAGATA
TGCATTCGAACAGCTCCTAGCCACGCTGAGCAAGTTACTCAGCTATTTGG
GCGAGGCCAAGGCCTATGGCGTCCACAATCTTCCGTTGGCTATGGAGCAG
TGCTTTGCCCGCTGTCCGCATGGCGTTGGTGGACTGACCGAGCCGCAGTT
CCACAAACTCTGGACGGGAGCGGGTGTCCAGACGAGATTCCTGATCTATG
GCAATCTGCTGGCACTGGTGAAACGCATCGAGGACACCGAGCATTTGATT
CACAGTAATTCTTGTGCCGGCTGCCGCAAGGAGCACATTGTGGGCATACG
TTTCCGGTGTCAGGTGTGTAGGGATATATCGTTGTGCCTGCCCTGCTTTG
CAGTGGGCTTCGCTGGTGGTCGCCACGAGCCGGGTCATCGGATGTGCGAG
GTCTTCGTGGAGGATCAGCCGCCATTGCGTTGGACCCGCCACCTGGCCAG
GCTGTGCGGCTGGCTGGTGATGCCGCGCAAAACACAGGAGGAGGAGCGTC
GCGGCTTCTGTAATGCGCAGGAGAGTGGGCCCGCCTTGGGTCAATCCGCT
GCCACGCCCATTCCCGCAGAGACGCGCAGTGTGCGCAGTCAGTGCCAGGA
GAAGGACCGCACAGTTGTCCTGCAGCAACAGCAGCAGGAGCTCTGCTCCC
TGACGGGTCTAGCCAGCGAGGCGTCCAGCAGGCTGCAGTCCATCATCGAT
CGATTGCTTTTGCAAAATGCGAAGCTGGAAACCCAGCTGCAAACAGTGGC
CACCGCATCTAGTTCGGAAATATCGCAGTTTCTGAGCGCCCATCAGTGCT
TTCTGCTGCAGATTATCGAGGATATGCGACAGCTATCACATGCCTCAGCG
GTAACTTCGCCGCCACCTGCGCCAGCTGCCCAAGTGGCGCCTTCAGCTGC
GCCCCTAGTCAGCTCCACGTTCCTTAGCTCCAGCACGCCTCAGCGACAGA
TGCTATTCGACATGTATGCGCCCGTGGGTGCCAATCTCACGCACTCCATA
AATGGCGCCGACTTGAATCGCAGCTATCTGGAGGCAAACAAATCGGATTA
CTCGCTCAACGACATAAGCTTGTGGTTCGACCAGCGTCGCTCGAGTGTCC
AGCCAGGACAAGGACCTGGTTCCCTGCCGGCTCCTCTGCCGCTGCCCATG
CCGCTGGGTGCTCTACTGGAACAGCAGCCGGCAAACGGCGGAGATGGCCG
CGACACCGAGATGGTGAACTTTAAGCTGCTGCTGCACAAGGTCAAGGAGA
TCGTCGAGGACTCGTACAGCGATAATGCCGAACTGTCGGCGGCCACGCAA
AATCTGGAGAACGTTCTCGATAGCATCATCAAGAGCGAGGAGCAGCAGCG
GCGCATCAGCACGTGAAAGCTTTCTAGACCAT

BS15451.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 1950 CG6157-PA 1..1950 17..1966 9750 100 Plus
dah-RB 1941 CG6157-PB 1..1941 17..1966 9580 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 2353 CG6157-RA 103..2052 17..1966 9750 100 Plus
dah-RB 2344 CG6157-RB 103..2043 17..1966 9580 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15329010..15329868 463..1321 4295 100 Plus
X 23542271 X 15330334..15330701 1599..1966 1840 100 Plus
X 23542271 X 15328444..15328672 17..245 1145 100 Plus
X 23542271 X 15328736..15328953 246..463 1090 100 Plus
X 23542271 X 15330112..15330271 1439..1598 800 100 Plus
X 23542271 X 15329932..15330049 1321..1438 590 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:38:01 has no hits.

BS15451.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:00 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1..1950 17..1966 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:01 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 99..2047 17..1965 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:18 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..2051 17..1965 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:43:41 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 99..2047 17..1965 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:12 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..2051 17..1965 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:12 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
X 15328444..15328672 17..245 100 -> Plus
X 15328736..15328952 246..462 100 -> Plus
X 15330112..15330271 1439..1598 100 -> Plus
X 15329010..15329867 463..1320 100 -> Plus
X 15329932..15330049 1321..1438 100 -> Plus
X 15330334..15330700 1599..1965 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:18 Download gff for BS15451.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15222477..15222705 17..245 100 -> Plus
arm_X 15222769..15222985 246..462 100 -> Plus
arm_X 15223043..15223900 463..1320 100 -> Plus
arm_X 15223965..15224082 1321..1438 100 -> Plus
arm_X 15224145..15224304 1439..1598 100 -> Plus
arm_X 15224367..15224733 1599..1965 100   Plus

BS15451.3prime Sequence

874 bp (737 high quality bases) assembled on 2006-12-21

> BS15451.3prime
ATGGTCTAGAAAGCTTTCACGTGCTGATGCGCCGCTGCTGCTCCTCGCTC
TTGATGATGCTATCGAGAACGTTCTCCAGATTTTGCGTGGCCGCCGACAG
TTCGGCATTATCGCTGTACGAGTCCTCGACGATCTCCTTGACCTTGTGCA
GCAGCAGCTTAAAGTTCACCATCTCGGTGTCGCGGCCATCTCCGCCGTTT
GCCGGCTGCTGTTCCAGTAGAGCACCCAGCGGCATGGGCAGCGGCAGAGG
AGCCGGCAGGGAACCAGGTCCTTGTCCTGGCTGGACACTCGAGCGACGCT
GGTCGAACCACAAGCTTATGTCGTTGAGCGAGTAATCCGATTTGTTTGCC
TCCAGATAGCTGCGATTCAAGTCGGCGCCATTTATGGAGTGCGTGAGATT
GGCACCCACGGGCGCATACATGTCGAATAGCATCTGTCGCTGAGGCGTGC
TGGAGCTAAGGAACGTGGAGCTGACTAGGGGCGCAGCTGAAGGCGCCACT
TGGGCAGCTGGCGCAGGTGGCGGCGAAGTTACCGCTGAGGCATGTGATAG
CTGTCGCATATCCTCGATAATCTGCAGCAGAAAGCACTGATGGGCGCTCA
GAAACTGCGATATTTCCGAACTAGATGCGGTGGCCACTGTTTGCAGCTGG
GTTTCCAGCTTCGCATTTTGCAAAAGCAATCGATCGATGATGGACTGCAG
CCTGCTGGACGCCTCGCTGGCTAGACCCGTCAGGGAGCAGAGCTCCTGCT
GCTGTTGCTGCAGGACAACTGTGCGGTCCTTCTCCTGGCACTGACTGCGC
ACACTGCGCGTCTCTGCGGGAATGGGCGTGGCAGCGGATTGACCCAAGGC
GGGCCCACTCTCCTGCGCATTACA

BS15451.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6157-PA 1950 dah-RA 1093..1950 874..17 4290 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RB 2344 CG6157-RB 1186..2043 874..17 4290 100 Minus
dah-RA 2353 CG6157-RA 1195..2052 874..17 4290 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:30:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15330334..15330701 384..17 1840 100 Minus
X 23542271 X 15329656..15329868 874..662 1065 100 Minus
X 23542271 X 15330112..15330271 544..385 800 100 Minus
X 23542271 X 15329932..15330049 662..545 590 100 Minus
Blast to na_te.dros performed on 2015-02-08 07:30:17 has no hits.

BS15451.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:17 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-PA 1094..1950 17..873 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:22 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6157-PA 1094..1950 17..873 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:24:57 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1196..2052 17..873 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:22:52 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 1196..2052 17..873 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:22:52 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
X 15329657..15329867 663..873 100 -> Minus
X 15329932..15330049 545..662 100 -> Minus
X 15330112..15330271 385..544 100 -> Minus
X 15330334..15330701 17..384 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:24:57 Download gff for BS15451.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15223690..15223900 663..873 100 -> Minus
arm_X 15223965..15224082 545..662 100 -> Minus
arm_X 15224145..15224304 385..544 100 -> Minus
arm_X 15224367..15224734 17..384 100   Minus

BS15451.5prime Sequence

871 bp (780 high quality bases) assembled on 2006-12-21

> BS15451.5prime
GAAGTTATCACTCGACATGCTGAGATCGTCGGTGCCCGTGCAGCTGACAA
AACTGCGAAATAGCGCCGAGGCCGTGGCGTCCATTGCCCGCGAAAAGGGA
TCCCAAGGTGGCCAAGGACAAAAGCAACAGGTGGACAAAGAGCTATCCAC
CATCATGGATGACTTGCAGCGGGATTACGGGAATTACAAGTACACGGTAT
ACCGGTGCGCCAGTAAATTTGTGGCGCTGCAAAAGATATTTCACACTGGA
AAAATCCCCTACAAGCTGGTTTTGGCCATTTTGGATCGCCATAACTTGAG
TGGTGGCCTGGAACTGATGGTTCCTCCATTCCAGTTGACCTCCCTGCTGC
ACGATGTATACTTTGCCTGCGAGAAACTAGGCCATTTCAACCAGGATGCG
AACTATAAACTGGACAGGGCAACCGGGCTGTTGGCCAACTTCTTCTGGAA
TGTCTACGATCCGCAACGCAGACACTCCATATCCCTGTTAGAGATCAGGA
TCACCTTCATACTGCTGTGCAAGCTATATAGCAGCGATCACCTGGTGGGC
GACATCTTTGGCCTGCTGGCCGATCCCAAGTCGCAGATCATCTCCAGATA
TGCATTCGAACAGCTCCTAGCCACGCTGAGCAAGTTACTCAGCTATTTGG
GCGAGGCCAAGGCCTATGGCGTCCACAATCTTCCGTTGGCTATGGAGCAG
TGCTTTGCCCGCTGTCCGCATGGCGTTGGTGGACTGACCGAGCCGCAGTT
CCACAAACTCTGGACGGGAGCGGGTGTCCAGACGAGATTCCTGATCTATG
GCAATCTGCTGGCACTGGGTGAACGCATCGAGGACACCGAGCATTTGATT
CACAGTAATTCTTGTGGCGGC

BS15451.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG6157-PA 1950 dah-RA 1..802 17..818 4010 100 Plus
CG6157-PA 1950 dah-RA 806..850 822..866 225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:16:02
Subject Length Description Subject Range Query Range Score Percent Strand
dah-RA 2353 CG6157-RA 103..957 17..871 4215 99.6 Plus
dah-RB 2344 CG6157-RB 103..948 17..871 4070 98.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15329010..15329418 463..871 1985 99 Plus
X 23542271 X 15328444..15328672 17..245 1145 100 Plus
X 23542271 X 15328736..15328953 246..463 1090 100 Plus
Blast to na_te.dros performed on 2015-02-08 07:15:59 has no hits.

BS15451.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:18 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-PA 1..855 17..871 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:24 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6157-PA 1..855 17..871 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:22:27 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..957 17..871 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:20:36 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
dah-RA 103..957 17..871 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:20:36 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15328444..15328672 17..245 100 -> Plus
X 15328736..15328952 246..462 100 -> Plus
X 15329010..15329418 463..871 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:22:27 Download gff for BS15451.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15222477..15222705 17..245 100 -> Plus
arm_X 15222769..15222985 246..462 100 -> Plus
arm_X 15223043..15223451 463..871 99   Plus

BS15451.pep Sequence

Translation from 16 to 1965

> BS15451.pep
MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDL
QRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLEL
MVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPQ
RRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQL
LATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWT
GAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQV
CRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWL
VMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTV
VLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSS
EISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSS
TFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDI
SLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMV
NFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRIST*

BS15451.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
dah-PA 649 CG6157-PA 1..649 1..649 3357 100 Plus
dah-PB 646 CG6157-PB 1..646 1..649 3328 99.5 Plus
Dys-PE 1051 CG34157-PE 445..729 53..343 218 25.9 Plus
Dys-PJ 1152 CG34157-PJ 445..729 53..343 218 25.9 Plus
Dys-PL 1323 CG34157-PL 717..1001 53..343 218 25.9 Plus