Clone BS15457 Report

Search the DGRC for BS15457

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:57
Vector:pDNR-Dual
Associated Gene/Transcriptmip130-RA
Protein status:BS15457.pep: full length peptide match
Sequenced Size:2993

Clone Sequence Records

BS15457.complete Sequence

2993 bp assembled on 2009-12-07

GenBank Submission: KX806118

> BS15457.complete
GAAGTTATCAGTCGACATGCTTACCGGCCGTCCAGTGAGAATGTCCGTTG
CAGTAAACCAAAAAGGCTGGGGTAAGAAGGCAGGAGCTTCCGTATCCGAC
TCCGCAATTCGTACACAGTCCGCCCTCAGCGAGGGGGGTGGGGCCATTGA
CGTCCGGCCGATGGAGCACGACGAGGAAATCAATCGCGAAGATCTCAACC
TCGACGAGGACGATGAGATGGAGGAGGAGGAGGAGGAGGAGCACGCCGAC
GAAGAGGACGATGACGAGGAGCCGGATAGCAACGAGAACAGCGCACCGGA
GGAGCAAGTAGAGCCGCCGGCCTTCAGCCTAGCGACGCTGGGACTCCAAC
GCGTGGGCAGCGCACCGCCGCCCAAGCCCAAAGTCCAGAAGGCCCCAATC
CCGACCCTAAATGCCCGTGGAATGCCTGCTCGGATACGAAAGAGAAATCG
TCTCTTTTATGACGAGAACATCATCAACGATGACAAGCCGCTGCGCATGA
GCTTGGCACCCAAGAAGACGCCTGGCAGACCACCGCAGTCTGCCGGCGGT
GGCTCTAGCCAGAAGATCCCGCTTACCCCGTCTAAGGTGCTGAAGAAGCG
CAAGGGAGTGGTCTCCCGCTACATGCGTTCCAGTGAGCAGGGAACCAACT
CCGTTTCGGCCAGCAATCAGCCCCAGCTGTTGGGCAAGCACAAGAAGGCG
ACGCCATCGAAGAGCCAGTCGGTGGGCAGCAAGCTGGGCTCCGGTGGACC
GAAAACAGGGCGGGGTGCCCATTTCATTGGAAAGGGTACCGCTGCAGCGG
TGGCTGCAGTAGCAGCCGCCGAGGAGGAAGCTAACCAGGCTGAGGCTGCA
GCGCTGGCGAACAAGCGGTTGGGCCAGTCCATTGGTCTTCGGCTGCGCAA
TCTGCTCAAGTTGCCCAAAGCGCACAAGTGGGCCATAGCCGAGTGGTTCT
ACTCGTACGTTGACAAGCCGCTATTCGAATGCCGTGATGAGTTTATGAAC
CATGTGAATGAACTGGCACCCAGGCTGGGCACACGGAGCCTCATTCGCCA
CGAGTGGGTGAATATTAGGCGGAGGATGGGCAGGCCGCGGCGATGCTCCG
CCAAATTTTTCAGCGAGGAGCGCAAGGAGTTGGACCGAAAGCGTCAGGTG
ATCCGGACCCTGCAATCGCGGAAGCCAGGCGAGTTCAAGGACTCCGTTTC
CATGCTATCGGACATGCCTGAGAAAATACCGATGACACTGCCGCTGGGCA
CCAAGGTCACTGCCAGATTAAGATCTCCCCAGGACGGGATCTTTGCGGGC
ACTGTGGCCGCCTACGACTCACTAAACGCCATGTACCGAGTGACCTTCGA
ACGAATCGGCTTGGGCACACACGCCATCCCCGACTACGAGATTGTGTCGG
AGAACTTTCACGAGATGCTGCCTCTGCACAGCTTCACGAAGGATTTCCGG
CCGAACTTGATGAGCATCTATCAAACGAATAACCTCGGCTTCACCACCAA
TCTGGGCTTCACGGCAAATCTTACCAACAACTATCTGCAGAAGAAGGAAA
AAATAGACGGCGGTGCAGGAGCGGCAGCTGGAGCGGGATCACTCTACTTC
AAGCCACAGAAGCACCTGGCCACCAATAATGCGGCTGCACGAAATGCGCT
CAGCATGAAGCTGAACAAGAGTGATCCGCTGCTGGGACAGGATTCGGTGG
GCGTGAGTCCCATTCGGCAGCAGTTGACGAGAAATCGCGGCTACTCCACC
TCGCTGTTGGAGCACCTGGTGCGCCTGGAGAAGTACATTGCAGTTAAGGC
GGATCGAATCCAGCGGCTCAACAAGATGAACGGCACCGCCGAGCTGGCCA
TGGGCGATATGATAAGCCATGACGAGAATGGGGATCGCCATCGCCGACAG
ATTGCAGTCAACTTCCAGCGCCAGTATGCCTTCAACATCGTGACCATCGA
GCGCATCAACGCCGAGCTCATGTTCGAGCTCACCAAGGTGCAGGAGCTGT
CCTCCAGCCTGACACGCAATCCCAATGTCCAGGCCATGATTTCGCCGACA
TATTTGCGCGAAGAGTGCCGCGCCAAGGCGTCACAGACGGTCGACGACAT
CAACAAGGGCATGGTGAAGAATACGCGGATGATAAAGCTGCTGAAGGACC
TGACCACGCTGTTGATCGTGACCCAGAATCTCGGCGGCGACTGCGAAGTG
AGCGAGGTTAACGAGGTGCTCGAAGGCTGCCTCGAGGAAGTGCGCAGCAA
TCTAATCTGCAGCGAAAACCGCGAGGTGTTCCAGATGAGTGTCCAGGGGC
GGCTGGAGTACATAGCCATGGACATCAGCAGACGCTTGGAGGAGAAGAGC
TTGAGTCGCGTGGCGGATGGCGACGACGATATTAAATCGCTGAAATCCGA
GGACGAGACCGATGAGGACCATGTGCAGGATCACAAGCATGGGGCAGATG
AGGAGCCCGCCGCAGATACCTCCAAGACAAAAGCGAAAGGCAGTCCAAAG
CAGGTTGAAGGGAAGGAGAACAGCGAAGTTGACAAGATGGACCACAGTAG
CCATCCCATGGACACAGACACAGAGAAGGAAGAGAAACTGGAATCTGGCG
GGTCGGAAAACGCAGGGTATGCGAGCCAGCAGCGACAAGACGAGGATCAG
GACACCGAGGAGCAGCACCTCGATCTGGAGGAGCAGCACCTGGACCCGGA
GGAGCATCACCTGGACCTGGAGGAGCAGCACCTGGACCCGGAGGAGCAGC
ACCTGGACCTGGAGGAGCACCACCTGGAACTGGAGGAGCAGCACCTGGAC
CCGGAGGAGCAGTCACTCAATCCGGCTGTGACCGAGGACACGCAGATCAC
CATTGAGTCGATGAAGGAATCCGATGAGGAGTTTCAATCGGCCGCCGAGA
CCGAGGAGGACGACATGGTCGGCCTGATCATGGAAGAAGAGGAGGAAGAG
GAGTTTGTGTACGATAAGGATCTGTAGAAGCTTTCTAGACCAT

BS15457.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
mip130-RA 2961 CG3480-PA 1..2961 17..2977 14805 100 Plus
mip130-RA 2961 CG3480-PA 2676..2795 2650..2769 450 91.7 Plus
mip130-RA 2961 CG3480-PA 2641..2733 2720..2812 375 93.5 Plus
mip130-RA 2961 CG3480-PA 2704..2796 2657..2749 375 93.5 Plus
mip130-RA 2961 CG3480-PA 2718..2796 2650..2728 260 88.6 Plus
mip130-RA 2961 CG3480-PA 2746..2795 2657..2706 205 94 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
mip130-RA 3459 CG3480-RA 115..3076 17..2978 14810 100 Plus
mip130-RA 3459 CG3480-RA 2790..2909 2650..2769 450 91.7 Plus
mip130-RA 3459 CG3480-RA 2755..2847 2720..2812 375 93.5 Plus
mip130-RA 3459 CG3480-RA 2818..2910 2657..2749 375 93.5 Plus
mip130-RA 3459 CG3480-RA 2832..2910 2650..2728 260 88.6 Plus
mip130-RA 3459 CG3480-RA 2860..2909 2657..2706 205 94 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1916976..1919935 19..2978 14800 100 Plus
X 23542271 X 1919649..1919768 2650..2769 450 91.7 Plus
X 23542271 X 1919614..1919706 2720..2812 375 93.5 Plus
X 23542271 X 1919677..1919769 2657..2749 375 93.5 Plus
X 23542271 X 1919691..1919769 2650..2728 260 88.6 Plus
X 23542271 X 1919719..1919768 2657..2706 205 94 Plus
Blast to na_te.dros performed on 2014-11-28 01:39:02 has no hits.

BS15457.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:02 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 1..2961 17..2977 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:40:12 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 111..3071 17..2977 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:53:44 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 141..3101 17..2977 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:47:02 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 111..3071 17..2977 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:37 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 115..3075 17..2977 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:37 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
X 1916975..1919934 17..2977 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:53:44 Download gff for BS15457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1811008..1813967 17..2977 99   Plus

BS15457.3prime Sequence

829 bp (734 high quality bases) assembled on 2006-12-21

> BS15457.3prime
ATGGTCTAGAAAGCTTCTACATATCCTTATCGTACACAAACTCCTCTTCC
TCCTCTTCTTCCATGATCAGGCCGACCATGTCGTCCTCCTCGGTCTCGGC
GGCCGATTGAAACTCCTCATCGGATTCCTTCATCGACTCAATGGTGATCT
GCGTGTCCTCGGTCACAGCCGGATTGAGTGACTGCTCCTCCGGGTCCAGG
TGCTGCTCCTCCAGTTCCAGGTGGTGCTCCTCCAGGTCCAGGTGCTGCTC
CTCCGGGTCCAGGTGCTGCTCCTCCAGGTCCAGGTGATGCTCCTCCGGGT
CCAGGTGCTGCTCCTCCAGATCGAGGTGCTGCTCCTCGGTGTCCTGATCC
TCGTCTTGTCGCTGCTGGCTCGCATACCCTGCGTTTTCCGACCCGCCAGA
TTCCAGTTTCTCTTCCTTCTCTGTGTCTGTGTCCATGGGATGGCTACTGT
GGTCCATCTTGTCAACTTCGCTGTTCTCCTTCCCTTCAACCTGCTTTGGA
CTGCCTTTCGCTTTTGTCTTGGAGGTATCTGCGGCGGGCTCCTCATCTGC
CCCATGCTTGTGATCCTGCACATGGTCCTCATCGGTCTCGTCCTCGGATT
TCAGCGATTTAATATCGTCGTCGCCATCCGCCACGCGACTCAAGCTCTTC
TCCTCCAAGCGTCTGCTGATGTCCATGGCTATGTACTCCAGCCGCCCCTG
GACACTCATCTGGAACACCTCGCGGTTTTCGCTGCAGATTAGATTGCTGC
GCACTTCCTCGAGGCAGCCTTCGAGCACCTCGTTAACCTCGCTCACTTCG
CAATCGCCGCCGAGATTCTGGGTCACGAT

BS15457.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3480-PA 2961 mip130-RA 2149..2961 829..17 4015 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
mip130-RA 3459 CG3480-RA 2263..3076 829..16 4040 99.8 Minus
mip130-RA 3459 CG3480-RA 2790..2909 344..225 450 91.7 Minus
mip130-RA 3459 CG3480-RA 2755..2847 274..182 375 93.5 Minus
mip130-RA 3459 CG3480-RA 2818..2910 337..245 375 93.5 Minus
mip130-RA 3459 CG3480-RA 2832..2910 344..266 260 88.6 Minus
mip130-RA 3459 CG3480-RA 2860..2909 337..288 205 94 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1919122..1919935 829..16 4040 99.8 Minus
X 23542271 X 1919649..1919768 344..225 450 91.7 Minus
X 23542271 X 1919614..1919706 274..182 375 93.5 Minus
X 23542271 X 1919677..1919769 337..245 375 93.5 Minus
X 23542271 X 1919691..1919769 344..266 260 88.6 Minus
X 23542271 X 1919719..1919768 337..288 205 94 Minus
Blast to na_te.dros performed on 2015-02-10 17:54:24 has no hits.

BS15457.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:28 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3480-PA 2149..2961 17..829 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:37 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3480-PA 2149..2961 17..829 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 18:38:10 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 2289..3102 16..829 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 19:11:15 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 2263..3076 16..829 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 19:11:15 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1919122..1919935 16..829 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 18:38:10 Download gff for BS15457.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1813155..1813968 16..829 99   Minus

BS15457.5prime Sequence

895 bp (776 high quality bases) assembled on 2006-12-21

> BS15457.5prime
GAAGTTATCACTCGACATGCTTACCGGCCGTCCAGTGAGAATGTCCGTTG
CAGTAAACCAAAAAGGCTGGGGTAAGAAGGCAGGAGCTTCCGTATCCGAC
TCCGCAATTCGTACACAGTCCGCCCTCAGCGAGGGGGGTGGGGCCATTGA
CGTCCGGCCGATGGAGCACGACGAGGAAATCAATCGCGAAGATCTCAACC
TCGACGAGGACGATGAGATGGAGGAGGAGGAGGAGGAGGAGCACGCCGAC
GAAGAGGACGATGACGAGGAGCCGGATAGCAACGAGAACAGCGCACCGGA
GGAGCAAGTAGAGCCGCCGGCCTTCAGCCTAGCGACGCTGGGACTCCAAC
GCGTGGGCAGCGCACCGCCGCCCAAGCCCAAAGTCCAGAAGGCCCCAATC
CCGACCCTAAATGCCCGTGGAATGCCTGCTCGGATACGAAAGAGAAATCG
TCTCTTTTATGACGAGAACATCATCAACGATGACAAGCCGCTGCGCATGA
GCTTGGCACCCAAGAAGACGCCTGGCAGACCACCGCAGTCTGCCGGCGGT
GGCTCTAGCCAGAAGATCCCGCTTACCCCGTCTAAGGTGCTGAAGAAGCG
CAAGGGAGTGGTCTCCCGCTACATGCGTTCCAGTGAGCAGGGAACCAACT
CCGTTTCGGCCAGCAATCAGCCCCAGCTGTTGGGCAAGCACAAGAAGGCG
ACGCCATCGAAGAGCCAGTCGGTGGGCAGCAAGCTGGGCTCCGGTGGACC
GAANACAGGGCGGGGTGCCCATTTCATTGGAAAGGGTACCGCTGCAGCGG
TGGCTGCAGTAGCAGCCGCCGAGGAAGAAGCTAACCAGGCTGAGGCTGCA
GCGCTGGCGAAACAGCGGTTGGGCCAGTCCATTGGTCTTCGGCTG

BS15457.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3480-PA 2961 mip130-RA 1..879 17..895 4301 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 03:52:28
Subject Length Description Subject Range Query Range Score Percent Strand
mip130-RA 3459 CG3480-RA 115..993 17..895 4339 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 03:52:20
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1916976..1917852 19..895 4329 99.5 Plus
Blast to na_te.dros performed on 2015-01-31 03:52:24 has no hits.

BS15457.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:29 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3480-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:38 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3480-PA 1..879 17..895 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:51:43 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 136..1019 10..895 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 05:24:08 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
mip130-RA 110..993 10..895 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:24:08 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1916974..1917852 16..895 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:51:43 Download gff for BS15457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 1811007..1811885 16..895 99   Plus

BS15457.pep Sequence

Translation from 16 to 2976

> BS15457.pep
MLTGRPVRMSVAVNQKGWGKKAGASVSDSAIRTQSALSEGGGAIDVRPME
HDEEINREDLNLDEDDEMEEEEEEEHADEEDDDEEPDSNENSAPEEQVEP
PAFSLATLGLQRVGSAPPPKPKVQKAPIPTLNARGMPARIRKRNRLFYDE
NIINDDKPLRMSLAPKKTPGRPPQSAGGGSSQKIPLTPSKVLKKRKGVVS
RYMRSSEQGTNSVSASNQPQLLGKHKKATPSKSQSVGSKLGSGGPKTGRG
AHFIGKGTAAAVAAVAAAEEEANQAEAAALANKRLGQSIGLRLRNLLKLP
KAHKWAIAEWFYSYVDKPLFECRDEFMNHVNELAPRLGTRSLIRHEWVNI
RRRMGRPRRCSAKFFSEERKELDRKRQVIRTLQSRKPGEFKDSVSMLSDM
PEKIPMTLPLGTKVTARLRSPQDGIFAGTVAAYDSLNAMYRVTFERIGLG
THAIPDYEIVSENFHEMLPLHSFTKDFRPNLMSIYQTNNLGFTTNLGFTA
NLTNNYLQKKEKIDGGAGAAAGAGSLYFKPQKHLATNNAAARNALSMKLN
KSDPLLGQDSVGVSPIRQQLTRNRGYSTSLLEHLVRLEKYIAVKADRIQR
LNKMNGTAELAMGDMISHDENGDRHRRQIAVNFQRQYAFNIVTIERINAE
LMFELTKVQELSSSLTRNPNVQAMISPTYLREECRAKASQTVDDINKGMV
KNTRMIKLLKDLTTLLIVTQNLGGDCEVSEVNEVLEGCLEEVRSNLICSE
NREVFQMSVQGRLEYIAMDISRRLEEKSLSRVADGDDDIKSLKSEDETDE
DHVQDHKHGADEEPAADTSKTKAKGSPKQVEGKENSEVDKMDHSSHPMDT
DTEKEEKLESGGSENAGYASQQRQDEDQDTEEQHLDLEEQHLDPEEHHLD
LEEQHLDPEEQHLDLEEHHLELEEQHLDPEEQSLNPAVTEDTQITIESMK
ESDEEFQSAAETEEDDMVGLIMEEEEEEEFVYDKDL*

BS15457.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
mip130-PA 986 CG3480-PA 1..986 1..986 5061 100 Plus
aly-PB 568 CG2075-PB 66..305 213..470 240 27.7 Plus
aly-PA 568 CG2075-PA 66..305 213..470 240 27.7 Plus
Sh3beta-PE 485 CG8582-PE 135..350 776..984 162 23.6 Plus