Clone BS15464 Report

Search the DGRC for BS15464

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:154
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG7192-RA
Protein status:BS15464.pep: full length peptide match
Sequenced Size:1091

Clone Sequence Records

BS15464.3prime Sequence

861 bp (682 high quality bases) assembled on 2006-12-21

> BS15464.3prime
ATGGTCTAGAAAGCTTTTACTTAAAGAACGGGTTCTTAGATGCCGATGAC
TTCATGGTGCACAAGATCTGACGTTCCAGCTGAAAGTCATAGTCCAGGGA
CTTGAGCAGCGTAGAGATTTCTGGCAGTGTAGGTATATCATTCACAGCTT
GGTTGCGCTGCAGCCTAACGTCCATGACGAAAGGCACTCCCTCCAGCTCG
GTGTAGGTGCCCAAGGTGCCCGTTCCGCCGTAAGTACCGTGTCCTCCGCC
AGAACCCACTCCCGCTGGCCGCGGTGGCGCCGGTCGCTGTGGCGAGTTTA
TTTGATAGTTGGCTTGGATCTCCTCATAGTCATGGTGTTCAGTCGGCGGT
TGTGGCAGTGGTCCACGTGAGTTGCGTTGACCCTGGAGATTCAGGCGGTT
CAGGGCCTGCTCCACCTCGCAAGTGGCTGGAGCTGGCAATCCTCCACCTG
GCACTGGCGGCGAAAGGCGCACTGGGATCGCGCTGGTTTTGTAGCAGATA
AGCACTCCGTTGATATCGCCGGCCAGCTTAAAGCCATCGGGCGCTGCCTT
CAACTTGGAGCAGAGTATTATGTCGGTGACCGCCTGGGTCACAGTGCCGC
GCTTGGAGAGCTTGTAGATCAACTGCCGCTTGCGCCAGGCCTTCTGGTCG
CTATCGGCAGTGCGGGAGACCTGCGAGAATTCCTTGGGCGGCGGCGTTTT
ATCCGAAATCACTTGTAGGGTCTCCACCACGTATTCCGGCAGGCCCTCGG
ACTTGGACAGGCAGAGGTAGCGTGTGTTCTGGCGTCAAACAGGCTGTAGT
CGCGCCATAGGTCCGCATCCGAATCCTGGTCGTAGGTGCGGCTTATGGCA
CTGAAGTTCTT

BS15464.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PA 1059 CG7192-RA 290..1059 786..17 3850 100 Minus
CG7192-PB 1059 CG7192-RB 290..1059 786..17 3850 100 Minus
CG7192-PA 1059 CG7192-RA 214..289 861..786 380 100 Minus
CG7192-PB 1059 CG7192-RB 214..289 861..786 380 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 422..1267 861..17 4205 99.9 Minus
CG7192-RB 1928 CG7192-RB 249..1094 861..17 4205 99.9 Minus
CG7192-RA 2126 CG7192-RA 447..1292 861..17 4205 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 359..713 1775 100 Plus
X 23542271 X 18098579..18098800 137..358 1110 100 Plus
X 23542271 X 18099287..18099435 714..861 695 99.3 Plus
X 23542271 X 18098392..18098511 17..136 600 100 Plus
Blast to na_te.dros performed on 2015-02-10 18:33:22 has no hits.

BS15464.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:37 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 214..1059 17..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:48 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 214..1059 17..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:03:20 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 447..1296 11..861 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:43:41 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 447..1296 11..861 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:43:41 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18098388..18098511 11..136 97 <- Plus
X 18098579..18098800 137..358 100 <- Plus
X 18098868..18099222 359..713 100 <- Plus
X 18099287..18099435 714..861 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:03:20 Download gff for BS15464.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17992421..17992544 11..136 97 <- Plus
arm_X 17992612..17992833 137..358 100 <- Plus
arm_X 17992901..17993255 359..713 100 <- Plus
arm_X 17993320..17993468 714..861 99   Plus

BS15464.5prime Sequence

892 bp (766 high quality bases) assembled on 2006-12-21

> BS15464.5prime
GAAGTTATCACTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAGTGGGGTCTGGCGGAGGA
CACGGTACTTACGGCGGAACGGGCACCTTGGGGCACCTACAC

BS15464.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PA 1059 CG7192-RA 1..866 17..882 4305 99.8 Plus
CG7192-PB 1059 CG7192-RB 1..866 17..882 4305 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 209..1083 17..892 4340 99.8 Plus
CG7192-RB 1928 CG7192-RB 36..910 17..892 4340 99.8 Plus
CG7192-RA 2126 CG7192-RA 234..1108 17..892 4340 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 733..379 1775 100 Minus
X 23542271 X 18099506..18099711 222..17 1030 100 Minus
X 23542271 X 18099287..18099443 378..222 785 100 Minus
X 23542271 X 18098652..18098800 882..734 730 99.3 Minus
Blast to na_te.dros performed on 2015-02-10 15:28:16 has no hits.

BS15464.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:38 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 1..875 17..892 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:49 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-PB 1..875 17..892 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:30:10 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 228..1108 13..892 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:31 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 228..1108 13..892 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:31 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18098643..18098800 734..892 98 <- Minus
X 18098868..18099222 379..733 100 <- Minus
X 18099287..18099442 223..378 100 <- Minus
X 18099506..18099713 13..222 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:30:10 Download gff for BS15464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17992676..17992833 734..892 98 <- Minus
arm_X 17992901..17993255 379..733 100 <- Minus
arm_X 17993320..17993475 223..378 100 <- Minus
arm_X 17993539..17993746 13..222 99   Minus

BS15464.complete Sequence

1091 bp assembled on 2008-08-14

GenBank Submission: KX805686

> BS15464.complete
GAAGTTATCACTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAGTGGGTTCTGGCGGAGGA
CACGGTACTTACGGCGGAACGGGCACCTTGGGCACCTACACCGAGCTGGA
GGGAGTGCCTTTCGTCATGGACGTTAGGCTGCAGCGCAACCAAGCTGTGA
ATGATATACCTACACTGCCAGAAATCTCTACGCTGCTCAAGTCCCTGGAC
TATGACTTTCAGCTGGAACGTCAGATCTTGTGCACCATGAAGTCATCGGC
ATCTAAGAACCCGTTCTTTAAGTAAAAGCTTTCTAGACCAT

BS15464.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 1059 CG7192-PD 1..1059 17..1075 5295 100 Plus
CG7192-RB 1059 CG7192-PB 1..1059 17..1075 5295 100 Plus
CG7192-RA 1059 CG7192-PA 1..1059 17..1075 5295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-RD 2101 CG7192-RD 209..1267 17..1075 5295 100 Plus
CG7192-RB 1928 CG7192-RB 36..1094 17..1075 5295 100 Plus
CG7192-RA 2126 CG7192-RA 234..1292 17..1075 5295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18098868..18099222 733..379 1775 100 Minus
X 23542271 X 18098579..18098800 955..734 1110 100 Minus
X 23542271 X 18099506..18099711 222..17 1030 100 Minus
X 23542271 X 18099287..18099443 378..222 785 100 Minus
X 23542271 X 18098392..18098511 1075..956 600 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:58:50 has no hits.

BS15464.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:42:50 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RB 30..1098 13..1081 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:46 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 234..1290 17..1073 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:17 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RB 36..1092 17..1073 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:22 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
CG7192-RA 234..1290 17..1073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:22 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
X 18099506..18099711 17..222 100   Minus
X 18098394..18098511 956..1073 100 <- Minus
X 18098579..18098800 734..955 100 <- Minus
X 18098868..18099222 379..733 100 <- Minus
X 18099287..18099442 223..378 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:46 Download gff for BS15464.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17993539..17993744 17..222 100   Minus
arm_X 17992427..17992544 956..1073 100 <- Minus
arm_X 17992612..17992833 734..955 100 <- Minus
arm_X 17992901..17993255 379..733 100 <- Minus
arm_X 17993320..17993475 223..378 100 <- Minus

BS15464.pep Sequence

Translation from 16 to 1074

> BS15464.pep
MNKVGKHIQSGIGGAPNAALSTAALLGTPLEATNGAGSTSTTNVFNSIMS
FLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQN
TRYLCLSKSEGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR
QLIYKLSKRGTVTQAVTDIILCSKLKAAPDGFKLAGDINGVLICYKTSAI
PVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGPLPQPPTEHHDY
EEIQANYQINSPQRPAPPRPAGVGSGGGHGTYGGTGTLGTYTELEGVPFV
MDVRLQRNQAVNDIPTLPEISTLLKSLDYDFQLERQILCTMKSSASKNPF
FK*

BS15464.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG7192-PD 352 CG7192-PD 1..352 1..352 1844 100 Plus
CG7192-PB 352 CG7192-PB 1..352 1..352 1844 100 Plus
CG7192-PA 352 CG7192-PA 1..352 1..352 1844 100 Plus