Clone Sequence Records
BS15464.3prime Sequence
861 bp (682 high quality bases) assembled on 2006-12-21
> BS15464.3prime
ATGGTCTAGAAAGCTTTTACTTAAAGAACGGGTTCTTAGATGCCGATGAC
TTCATGGTGCACAAGATCTGACGTTCCAGCTGAAAGTCATAGTCCAGGGA
CTTGAGCAGCGTAGAGATTTCTGGCAGTGTAGGTATATCATTCACAGCTT
GGTTGCGCTGCAGCCTAACGTCCATGACGAAAGGCACTCCCTCCAGCTCG
GTGTAGGTGCCCAAGGTGCCCGTTCCGCCGTAAGTACCGTGTCCTCCGCC
AGAACCCACTCCCGCTGGCCGCGGTGGCGCCGGTCGCTGTGGCGAGTTTA
TTTGATAGTTGGCTTGGATCTCCTCATAGTCATGGTGTTCAGTCGGCGGT
TGTGGCAGTGGTCCACGTGAGTTGCGTTGACCCTGGAGATTCAGGCGGTT
CAGGGCCTGCTCCACCTCGCAAGTGGCTGGAGCTGGCAATCCTCCACCTG
GCACTGGCGGCGAAAGGCGCACTGGGATCGCGCTGGTTTTGTAGCAGATA
AGCACTCCGTTGATATCGCCGGCCAGCTTAAAGCCATCGGGCGCTGCCTT
CAACTTGGAGCAGAGTATTATGTCGGTGACCGCCTGGGTCACAGTGCCGC
GCTTGGAGAGCTTGTAGATCAACTGCCGCTTGCGCCAGGCCTTCTGGTCG
CTATCGGCAGTGCGGGAGACCTGCGAGAATTCCTTGGGCGGCGGCGTTTT
ATCCGAAATCACTTGTAGGGTCTCCACCACGTATTCCGGCAGGCCCTCGG
ACTTGGACAGGCAGAGGTAGCGTGTGTTCTGGCGTCAAACAGGCTGTAGT
CGCGCCATAGGTCCGCATCCGAATCCTGGTCGTAGGTGCGGCTTATGGCA
CTGAAGTTCTT
BS15464.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-PA | 1059 | CG7192-RA | 290..1059 | 786..17 | 3850 | 100 | Minus |
CG7192-PB | 1059 | CG7192-RB | 290..1059 | 786..17 | 3850 | 100 | Minus |
CG7192-PA | 1059 | CG7192-RA | 214..289 | 861..786 | 380 | 100 | Minus |
CG7192-PB | 1059 | CG7192-RB | 214..289 | 861..786 | 380 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-RD | 2101 | CG7192-RD | 422..1267 | 861..17 | 4205 | 99.9 | Minus |
CG7192-RB | 1928 | CG7192-RB | 249..1094 | 861..17 | 4205 | 99.9 | Minus |
CG7192-RA | 2126 | CG7192-RA | 447..1292 | 861..17 | 4205 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18098868..18099222 | 359..713 | 1775 | 100 | Plus |
X | 23542271 | X | 18098579..18098800 | 137..358 | 1110 | 100 | Plus |
X | 23542271 | X | 18099287..18099435 | 714..861 | 695 | 99.3 | Plus |
X | 23542271 | X | 18098392..18098511 | 17..136 | 600 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:33:22 has no hits.
BS15464.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:37 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-PB | 214..1059 | 17..861 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:48 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-PB | 214..1059 | 17..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:03:20 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 447..1296 | 11..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:43:41 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 447..1296 | 11..861 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:43:41 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18098388..18098511 | 11..136 | 97 | <- | Plus |
X | 18098579..18098800 | 137..358 | 100 | <- | Plus |
X | 18098868..18099222 | 359..713 | 100 | <- | Plus |
X | 18099287..18099435 | 714..861 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:03:20 Download gff for
BS15464.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17992421..17992544 | 11..136 | 97 | <- | Plus |
arm_X | 17992612..17992833 | 137..358 | 100 | <- | Plus |
arm_X | 17992901..17993255 | 359..713 | 100 | <- | Plus |
arm_X | 17993320..17993468 | 714..861 | 99 | | Plus |
BS15464.5prime Sequence
892 bp (766 high quality bases) assembled on 2006-12-21
> BS15464.5prime
GAAGTTATCACTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAGTGGGGTCTGGCGGAGGA
CACGGTACTTACGGCGGAACGGGCACCTTGGGGCACCTACAC
BS15464.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-PA | 1059 | CG7192-RA | 1..866 | 17..882 | 4305 | 99.8 | Plus |
CG7192-PB | 1059 | CG7192-RB | 1..866 | 17..882 | 4305 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:28:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-RD | 2101 | CG7192-RD | 209..1083 | 17..892 | 4340 | 99.8 | Plus |
CG7192-RB | 1928 | CG7192-RB | 36..910 | 17..892 | 4340 | 99.8 | Plus |
CG7192-RA | 2126 | CG7192-RA | 234..1108 | 17..892 | 4340 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18098868..18099222 | 733..379 | 1775 | 100 | Minus |
X | 23542271 | X | 18099506..18099711 | 222..17 | 1030 | 100 | Minus |
X | 23542271 | X | 18099287..18099443 | 378..222 | 785 | 100 | Minus |
X | 23542271 | X | 18098652..18098800 | 882..734 | 730 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:28:16 has no hits.
BS15464.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:38 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-PB | 1..875 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:04:49 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-PB | 1..875 | 17..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:30:10 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 228..1108 | 13..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:31 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 228..1108 | 13..892 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:31 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18098643..18098800 | 734..892 | 98 | <- | Minus |
X | 18098868..18099222 | 379..733 | 100 | <- | Minus |
X | 18099287..18099442 | 223..378 | 100 | <- | Minus |
X | 18099506..18099713 | 13..222 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:30:10 Download gff for
BS15464.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17992676..17992833 | 734..892 | 98 | <- | Minus |
arm_X | 17992901..17993255 | 379..733 | 100 | <- | Minus |
arm_X | 17993320..17993475 | 223..378 | 100 | <- | Minus |
arm_X | 17993539..17993746 | 13..222 | 99 | | Minus |
BS15464.complete Sequence
1091 bp assembled on 2008-08-14
GenBank Submission: KX805686
> BS15464.complete
GAAGTTATCACTCGACATGAACAAAGTGGGCAAGCACATTCAAAGCGGCA
TCGGTGGAGCACCCAACGCGGCATTGTCCACGGCGGCTCTACTGGGTACT
CCGCTGGAGGCGACCAATGGTGCTGGCTCGACCAGCACCACCAATGTATT
CAATTCCATCATGAGCTTTCTGCCGGACAATCGACCCATCACCTCGCTGC
ACATCGTCGAGGATTTCGAGCGCTGCCCGAAGAACTTCAGTGCCATAAGC
CGCACCTACGACCAGGATTCGGATGCGGACCTATGGCGCGACTACAGCCT
GTTTGGACGCCAGAACACACGCTACCTCTGCCTGTCCAAGTCCGAGGGCC
TGCCGGAATACGTGGTGGAGACCCTACAAGTGATTTCGGATAAAACGCCG
CCGCCCAAGGAATTCTCGCAGGTCTCCCGCACTGCCGATAGCGACCAGAA
GGCCTGGCGCAAGCGGCAGTTGATCTACAAGCTCTCCAAGCGCGGCACTG
TGACCCAGGCGGTCACCGACATAATACTCTGCTCCAAGTTGAAGGCAGCG
CCCGATGGCTTTAAGCTGGCCGGCGATATCAACGGAGTGCTTATCTGCTA
CAAAACCAGCGCGATCCCAGTGCGCCTTTCGCCGCCAGTGCCAGGTGGAG
GATTGCCAGCTCCAGCCACTTGCGAGGTGGAGCAGGCCCTGAACCGCCTG
AATCTCCAGGGTCAACGCAACTCACGTGGACCACTGCCACAACCGCCGAC
TGAACACCATGACTATGAGGAGATCCAAGCCAACTATCAAATAAACTCGC
CACAGCGACCGGCGCCACCGCGGCCAGCGGGAGTGGGTTCTGGCGGAGGA
CACGGTACTTACGGCGGAACGGGCACCTTGGGCACCTACACCGAGCTGGA
GGGAGTGCCTTTCGTCATGGACGTTAGGCTGCAGCGCAACCAAGCTGTGA
ATGATATACCTACACTGCCAGAAATCTCTACGCTGCTCAAGTCCCTGGAC
TATGACTTTCAGCTGGAACGTCAGATCTTGTGCACCATGAAGTCATCGGC
ATCTAAGAACCCGTTCTTTAAGTAAAAGCTTTCTAGACCAT
BS15464.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:58:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-RD | 1059 | CG7192-PD | 1..1059 | 17..1075 | 5295 | 100 | Plus |
CG7192-RB | 1059 | CG7192-PB | 1..1059 | 17..1075 | 5295 | 100 | Plus |
CG7192-RA | 1059 | CG7192-PA | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-RD | 2101 | CG7192-RD | 209..1267 | 17..1075 | 5295 | 100 | Plus |
CG7192-RB | 1928 | CG7192-RB | 36..1094 | 17..1075 | 5295 | 100 | Plus |
CG7192-RA | 2126 | CG7192-RA | 234..1292 | 17..1075 | 5295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18098868..18099222 | 733..379 | 1775 | 100 | Minus |
X | 23542271 | X | 18098579..18098800 | 955..734 | 1110 | 100 | Minus |
X | 23542271 | X | 18099506..18099711 | 222..17 | 1030 | 100 | Minus |
X | 23542271 | X | 18099287..18099443 | 378..222 | 785 | 100 | Minus |
X | 23542271 | X | 18098392..18098511 | 1075..956 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:58:50 has no hits.
BS15464.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:42:50 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RB | 30..1098 | 13..1081 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:46 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 234..1290 | 17..1073 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:03:17 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RB | 36..1092 | 17..1073 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:22 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7192-RA | 234..1290 | 17..1073 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:22 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18099506..18099711 | 17..222 | 100 | | Minus |
X | 18098394..18098511 | 956..1073 | 100 | <- | Minus |
X | 18098579..18098800 | 734..955 | 100 | <- | Minus |
X | 18098868..18099222 | 379..733 | 100 | <- | Minus |
X | 18099287..18099442 | 223..378 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:46 Download gff for
BS15464.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17993539..17993744 | 17..222 | 100 | | Minus |
arm_X | 17992427..17992544 | 956..1073 | 100 | <- | Minus |
arm_X | 17992612..17992833 | 734..955 | 100 | <- | Minus |
arm_X | 17992901..17993255 | 379..733 | 100 | <- | Minus |
arm_X | 17993320..17993475 | 223..378 | 100 | <- | Minus |
BS15464.pep Sequence
Translation from 16 to 1074
> BS15464.pep
MNKVGKHIQSGIGGAPNAALSTAALLGTPLEATNGAGSTSTTNVFNSIMS
FLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQN
TRYLCLSKSEGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR
QLIYKLSKRGTVTQAVTDIILCSKLKAAPDGFKLAGDINGVLICYKTSAI
PVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGPLPQPPTEHHDY
EEIQANYQINSPQRPAPPRPAGVGSGGGHGTYGGTGTLGTYTELEGVPFV
MDVRLQRNQAVNDIPTLPEISTLLKSLDYDFQLERQILCTMKSSASKNPF
FK*
BS15464.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7192-PD | 352 | CG7192-PD | 1..352 | 1..352 | 1844 | 100 | Plus |
CG7192-PB | 352 | CG7192-PB | 1..352 | 1..352 | 1844 | 100 | Plus |
CG7192-PA | 352 | CG7192-PA | 1..352 | 1..352 | 1844 | 100 | Plus |