Clone Sequence Records
BS15470.3prime Sequence
849 bp (754 high quality bases) assembled on 2006-12-21
> BS15470.3prime
ATGGTCTAGAAAGCTTTCATACTTGGCTGGCCGCCGGCTGCTTGAGAACG
TGGTGGTGCAGGTGGTGGTGGCTGGTGGAGGCCACCGAGGCTCCGCCCGC
CTGGGTGTAGGGCGTGGCCAGCAGGGAGCCCGCCGCCGAGCCCACGGGCA
TTCCCATTCCAGATCCGGCATAGGGATGCGGGATCGGAGGCCGCTGCTTG
ATCAGCGCCTGGTTGGCGCCCGTGCGGTCCGGCGCTCCTAGGAGTCTCCG
CCAGAAGCGTCGCCAGCTCTCCAGCGTCTTGCCAGACCAGATCCACACGC
CCGAGGTGATGCCCACGGCCAGGGCCATGAAGTACTTGAGCATCAGGACC
GAGTAGAGAGGCTTCTTGCCGGGACCCTTCACCTGGGCGCATGGACAGGC
CAGGGCCTTGATCCAGTCCTCAAAGTAGGCTGCTTCGTACAGGTAACATC
CGATAACTATGGTGGCCGGCACCGTGTAGAGCACCGAGAAGATGCCAATC
CTGATCATCAGTTTCTCCAGCTTGTCCGCCTTGACACCAGCTCCTACACC
GCCCTGTTGCTTGATAACCGAGCGGATGCGGAAGAGGGACACAAAGCCGG
CCATCAGGAAGGTGGTGCCGATTACGAGGTAAACGAAGAGCGGGGCCAGC
ACAAAGGTCTTTAGGTGATCCGGATTGAGGTTGCCCACATAGCAGATGCC
CAGAATGGGATCGCCATCCACCGCCGAGAGCAGGAGTACGGCCACGGACT
GGACAGTGGGAATCAACCAGGCGGCCAGGTGGAAGTACTGCGAGTGCTTG
GTGATGGCCTCATTGCCCCACTTCAGACCAGCGGCCAGGGAACAGGTGA
BS15470.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9739-PB | 2085 | fz2-RB | 1263..2085 | 839..17 | 4090 | 99.8 | Minus |
| CG9739-PA | 2085 | fz2-RA | 1263..2085 | 839..17 | 4090 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 1637..2469 | 849..17 | 4120 | 99.6 | Minus |
| fz2-RF | 4448 | CG9739-RF | 2312..3144 | 849..17 | 4120 | 99.6 | Minus |
| fz2-RE | 4345 | CG9739-RE | 2209..3041 | 849..17 | 4120 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:30:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19144202..19145034 | 17..849 | 4120 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-08 07:30:52 has no hits.
BS15470.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:49 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-PB | 1254..2085 | 17..848 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:05:04 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9739-PA | 1254..2085 | 17..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:25:03 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 2210..3041 | 17..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:22:57 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 2210..3041 | 17..848 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:22:57 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19144202..19145033 | 17..848 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:25:03 Download gff for
BS15470.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19137302..19138133 | 17..848 | 99 | | Plus |
BS15470.5prime Sequence
839 bp (723 high quality bases) assembled on 2006-12-21
> BS15470.5prime
GAAGTTATCACTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGG
GACTCGTCCTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGT
GCGGATCACGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGC
GAGTCCCGCACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATC
TGCGATGCGAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAAC
ATGACATCCTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGG
CCTGGAGGTGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGG
ACCTCAAGTTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGAT
TACCACAAGCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTC
GGGATGCGCACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAA
TGGCGTGCGAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATG
GAACAGCCCTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATC
GGGTGGCTCTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAG
GCAGTGGCTCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCACCTCA
ACGAAGCCGTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAAGG
AGAAAAGGCAAGCGGAAAAGAGTGCAGCTGCTCGTGCCGCTCTCCACTCA
TCTTCCTGGGGAANGAGCAGCTGCTGCAGCAGCAGTCGC
BS15470.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9739-PB | 2085 | fz2-RB | 1..823 | 17..839 | 4071 | 99.7 | Plus |
| CG9739-PA | 2085 | fz2-RA | 1..823 | 17..839 | 4071 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..1207 | 17..839 | 4089 | 99.8 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..1882 | 17..839 | 4089 | 99.8 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..1779 | 17..839 | 4089 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:31:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19145464..19146286 | 839..17 | 4089 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 17:31:27 has no hits.
BS15470.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:27:50 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-PB | 1..823 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:05:05 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9739-PA | 1..823 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:33:41 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..1779 | 17..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:35:24 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..1779 | 17..839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:35:24 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19145464..19146286 | 17..839 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:33:41 Download gff for
BS15470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19138564..19139386 | 17..839 | 99 | | Minus |
BS15470.complete Sequence
2117 bp assembled on 2008-08-15
GenBank Submission: KX803355
> BS15470.complete
GAAGTTATCACTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGG
GACTCGTCCTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGT
GCGGATCACGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGC
GAGTCCCGCACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATC
TGCGATGCGAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAAC
ATGACATCCTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGG
CCTGGAGGTGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGG
ACCTCAAGTTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGAT
TACCACAAGCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTC
GGGATGCGCACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAA
TGGCGTGCGAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATG
GAACAGCCCTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATC
GGGTGGCTCTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAG
GCAGTGGCTCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCACCTCA
ACGAAGCCGTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAAGG
AGAAAAGGCAAGCGGAAAAGAGTGCAGCTGCTCGTGCCGCTCCCCACTCA
TCTTCCTGGGGAAGGAGCAGCTGCTGCAGCAGCAGTCGCAGATGCCCATG
ATGCACCATCCACACCACTGGTACATGAACCTCACTGTCCAAAGGATCGC
CGGCGTTCCAAACTGCGGCATACCGTGCAAGGGGCCCTTCTTCAGCAACG
ACGAAAAGGATTTCGCCGGCCTCTGGATCGCCCTGTGGTCGGGACTGTGC
TTCTGCAGCACGCTCATGACCCTAACCACATTCATCATCGACACCGAAAG
GTTTAAGTACCCGGAGCGGCCCATTGTCTTCCTCTCCGCCTGCTACTTCA
TGGTGGCAGTGGGCTACCTGTCGCGCAACTTCCTGCAGAACGAGGAGATC
GCCTGCGACGGCCTGCTGCTCCGGGAAAGCTCCACGGGTCCGCACTCGTG
CACCCTGGTCTTCCTGCTTACCTACTTCTTTGGCATGGCCTCGTCCATCT
GGTGGGTGATCCTCAGTTTCACCTGGTTCCTGGCCGCTGGTCTGAAGTGG
GGCAATGAGGCCATCACCAAGCACTCGCAGTACTTCCACCTGGCCGCCTG
GTTGATTCCCACTGTCCAGTCCGTGGCCGTACTCCTGCTCTCGGCGGTGG
ATGGCGATCCCATTCTGGGCATCTGCTATGTGGGCAACCTCAATCCGGAT
CACCTAAAGACCTTTGTGCTGGCCCCGCTCTTCGTTTACCTCGTAATCGG
CACCACCTTCCTGATGGCCGGCTTTGTGTCCCTCTTCCGCATCCGCTCGG
TTATCAAGCAACAGGGCGGTGTAGGAGCTGGTGTCAAGGCGGACAAGCTG
GAGAAACTGATGATCAGGATTGGCATCTTCTCGGTGCTCTACACGGTGCC
GGCCACCATAGTTATCGGATGTTACCTGTACGAAGCAGCCTACTTTGAGG
ACTGGATCAAGGCCCTGGCCTGTCCATGCGCCCAGGTGAAGGGTCCCGGC
AAGAAGCCTCTCTACTCGGTCCTGATGCTCAAGTACTTCATGGCCCTGGC
CGTGGGCATCACCTCGGGCGTGTGGATCTGGTCTGGCAAGACGCTGGAGA
GCTGGCGACGCTTCTGGCGGAGACTCCTAGGAGCGCCGGACCGCACGGGC
GCCAACCAGGCGCTGATCAAGCAGCGGCCTCCGATCCCGCATCCCTATGC
CGGATCTGGAATGGGAATGCCCGTGGGCTCGGCGGCGGGCTCCCTGCTGG
CCACGCCCTACACCCAGGCGGGCGGAGCCTCGGTGGCCTCCACCAGCCAC
CACCACCTGCACCACCACGTTCTCAAGCAGCCGGCGGCCAGCCACGTATG
AAAGCTTTCTAGACCAT
BS15470.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 2085 | CG9739-PG | 1..2085 | 17..2101 | 10425 | 100 | Plus |
| fz2-RF | 2421 | CG9739-PF | 1..2085 | 17..2101 | 10425 | 100 | Plus |
| fz2-RE | 2085 | CG9739-PE | 1..2085 | 17..2101 | 10425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:34:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..2469 | 17..2101 | 10425 | 100 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..3144 | 17..2101 | 10425 | 100 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..3041 | 17..2101 | 10425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:34:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19144202..19146286 | 2101..17 | 10425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:34:23 has no hits.
BS15470.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:19:32 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RC | 1055..3139 | 17..2101 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:54:54 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..3040 | 17..2100 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:22 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RC | 1055..3138 | 17..2100 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:22:51 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 957..3040 | 17..2100 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:22:51 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19144203..19146286 | 17..2100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:54:54 Download gff for
BS15470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19137303..19139386 | 17..2100 | 100 | | Minus |
BS15470.pep Sequence
Translation from 16 to 2100
> BS15470.pep
MRHNRLKVLILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLDASPAPG
YGVPVIPKDPNLRCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGLEVHQ
FWPLVEIKCSPDLKFFLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPI
MQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSGS
GSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASG
KECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNC
GIPCKGPFFSNDEKDFAGLWIALWSGLCFCSTLMTLTTFIIDTERFKYPE
RPIVFLSACYFMVAVGYLSRNFLQNEEIACDGLLLRESSTGPHSCTLVFL
LTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFHLAAWLIPTV
QSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLM
AGFVSLFRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVI
GCYLYEAAYFEDWIKALACPCAQVKGPGKKPLYSVLMLKYFMALAVGITS
GVWIWSGKTLESWRRFWRRLLGAPDRTGANQALIKQRPPIPHPYAGSGMG
MPVGSAAGSLLATPYTQAGGASVASTSHHHLHHHVLKQPAASHV*
BS15470.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:16:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-PG | 694 | CG9739-PG | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PF | 806 | CG9739-PF | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PE | 694 | CG9739-PE | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PD | 694 | CG9739-PD | 1..694 | 1..694 | 3769 | 100 | Plus |
| fz2-PC | 694 | CG9739-PC | 1..694 | 1..694 | 3769 | 100 | Plus |
