Clone BS15521 Report

Search the DGRC for BS15521

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:155
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCG8281-RA
Protein status:BS15521.pep: full length peptide match
Sequenced Size:1079

Clone Sequence Records

BS15521.complete Sequence

1079 bp assembled on 2010-02-09

GenBank Submission: KX804522

> BS15521.complete
GAAGTTATCAGTCCCCATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACGAGATTCTCTTCGAGGCCGAGTCCAACAATCTG
CATCGCGGATCTGTGCAAATCAACAACAGCTTCGAACCCTACGTTCGCTA
CGAAGAAACGCCAAATGGTCACGAGGAGCAGGACAAATCACAGAGCCCCA
GCGTGCACACCTCCAGCGAATCCAAGCCCAATGTGTCGGGAGCGAGCGGA
AGCGGGGGAGGAGGTGGGCCACCGGGCAGCACCACCACCAGTGCGGGCAT
CAGGGAGTTCTAAAAGCTTTCTAGACCAT

BS15521.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-RA 1047 CG8281-PA 1..1047 17..1063 5130 99.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-RA 1301 CG8281-RA 145..1191 17..1063 5130 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7912607..7913653 17..1063 5130 99.3 Plus
Blast to na_te.dros performed on 2014-11-28 04:31:05 has no hits.

BS15521.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:55 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1189 17..1061 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:58 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1189 17..1061 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:59:00 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1189 17..1061 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:45 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1189 17..1061 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:45 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7912607..7913651 17..1061 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:58 Download gff for BS15521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7905707..7906751 17..1061 99   Plus

BS15521.3prime Sequence

778 bp (711 high quality bases) assembled on 2006-12-21

> BS15521.3prime
ATGGTCTAGAAAGCTTTTACAACTCCCTGATGCCCGCACTGGTGGTGGTG
CTGCCCGGTGGCCCACCTCCTCCCCCGCTTCCGCTCGCTCCCGACACATT
GGGCTTGGATTCGCTGGAGGTGTGCACGCTGGGGCTCTGTGATTTGTCCT
GCTCCTCGTGACCATTTGGCGTTTCTTCGTAGCGAACGTAGGGTTCGAAG
CTGTTGTTGATTTGCACAGATCCGCGATGCAGATTGTTGGACTCGGCCTC
GAAGAGAATCTCGTTGATGAAGCGTTCGGCCAGAAGACGCTGCTCGCGCG
GCAGTCGCTTCAGTTTGTGCGTCCAGGTGCGGGCGATGGACTCCTCCTCC
GGATATGTGCCAGCCAAATACTCGCAGGCTATGTTGAGTAGTTCGTCGGT
GTTGTGGGCGGTGCCTGTTGCACCTGGACCGCCAGTAGATCCGGCTCCTG
CTCCCGTACATGGCGGTGTTTGCCTGGCTCGCTTGCTGCTCCCATAATCC
ACATGGTTGGTTGCTGGCGGTGGCGGTGGCGGAGCTCCAAATGATTTGTG
AAACATCTCGGAAATGTTGGGCGTCTGACCACCAGCGCGTGGTGCTGGAT
AATGGAGGGCTGCTCCCTGGCTCTCCAGAAACGCACTCGGGCAATTGCTG
CTCTCACCGAAGGCGAAGTTGGGCTCGTTCTTAAAGGCGGGATTGACGGC
TAGAAACTTCTCCGAGTTGCGCAAAAAGTCCAGCTCCTGAAAGGTCCAGC
AGCGTGGACTGTGGAGGCTGCCCGATCG

BS15521.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-PA 1047 CG8281-RA 286..1043 778..21 3640 99.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:01:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-RA 1301 CG8281-RA 430..1191 778..17 3705 99.1 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:01:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7912892..7913653 778..17 3705 99.1 Minus
Blast to na_te.dros performed on 2015-02-10 15:01:46 has no hits.

BS15521.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:29:03 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-PA 286..1047 17..778 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:06:40 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-PA 286..1047 17..778 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:23:37 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 430..1195 10..778 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:08 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 430..1195 10..778 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:08 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 7912892..7913657 10..778 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:23:37 Download gff for BS15521.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7905992..7906757 10..778 98   Minus

BS15521.5prime Sequence

899 bp (812 high quality bases) assembled on 2006-12-21

> BS15521.5prime
GAAGTTATCCTTCGACATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACGAGATTCTCTTCGAGGCCGAGTCCCACATCTGC
ATCGCGGATCTGTGCAAATCAACAACAGCTTCGAACCCTACGTTCGCTA

BS15521.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:22:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-PA 1047 CG8281-RA 1..825 17..841 3975 99.2 Plus
CG8281-PA 1047 CG8281-RA 830..884 845..899 275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-RA 1301 CG8281-RA 145..1028 17..899 4290 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7912607..7913490 17..899 4265 99.1 Plus
Blast to na_te.dros performed on 2015-02-11 15:43:43 has no hits.

BS15521.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:29:04 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-PA 1..883 17..898 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:06:42 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-PA 1..883 17..898 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:46:54 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1027 17..898 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:29:35 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8281-RA 145..1027 17..898 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:29:35 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 7912607..7913489 17..898 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:46:54 Download gff for BS15521.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7905707..7906589 17..898 99   Plus

BS15521.pep Sequence

Translation from 16 to 1062

> BS15521.pep
MLPQTPPHGLKVMSGAEENRHYLRAFIQTYRDLPVLWDTSLRDYTNREKR
AEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKVVESALRSGSL
HSPRCWTFQELDFLRNSEKFLAVNPAFKNEPNFAFGESSNCPSAFLESQG
AALHYPAPRAGGQTPNISEMFHKSFGAPPPPPPATNHVDYGSSKRARQTP
PCTGAGAGSTGGPGATGTAHNTDELLNIACEYLAGTYPEEESIARTWTHK
LKRLPREQRLLAERFINEILFEAESNNLHRGSVQINNSFEPYVRYEETPN
GHEEQDKSQSPSVHTSSESKPNVSGASGSGGGGGPPGSTTTSAGIREF*

BS15521.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8281-PA 348 CG8281-PA 1..348 1..348 1856 100 Plus
CG4004-PE 319 CG4004-PE 16..105 23..115 166 34.4 Plus
CG4004-PD 319 CG4004-PD 16..105 23..115 166 34.4 Plus
CG4004-PA 319 CG4004-PA 16..105 23..115 166 34.4 Plus
CG4004-PB 339 CG4004-PB 1..83 33..118 153 38.4 Plus