Clone Sequence Records
BS15521.complete Sequence
1079 bp assembled on 2010-02-09
GenBank Submission: KX804522
> BS15521.complete
GAAGTTATCAGTCCCCATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACGAGATTCTCTTCGAGGCCGAGTCCAACAATCTG
CATCGCGGATCTGTGCAAATCAACAACAGCTTCGAACCCTACGTTCGCTA
CGAAGAAACGCCAAATGGTCACGAGGAGCAGGACAAATCACAGAGCCCCA
GCGTGCACACCTCCAGCGAATCCAAGCCCAATGTGTCGGGAGCGAGCGGA
AGCGGGGGAGGAGGTGGGCCACCGGGCAGCACCACCACCAGTGCGGGCAT
CAGGGAGTTCTAAAAGCTTTCTAGACCAT
BS15521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:31:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-RA | 1047 | CG8281-PA | 1..1047 | 17..1063 | 5130 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:31:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-RA | 1301 | CG8281-RA | 145..1191 | 17..1063 | 5130 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:31:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7912607..7913653 | 17..1063 | 5130 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:31:05 has no hits.
BS15521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:55 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1189 | 17..1061 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:58 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1189 | 17..1061 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:59:00 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1189 | 17..1061 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:30:45 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1189 | 17..1061 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:30:45 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7912607..7913651 | 17..1061 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:58 Download gff for
BS15521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7905707..7906751 | 17..1061 | 99 | | Plus |
BS15521.3prime Sequence
778 bp (711 high quality bases) assembled on 2006-12-21
> BS15521.3prime
ATGGTCTAGAAAGCTTTTACAACTCCCTGATGCCCGCACTGGTGGTGGTG
CTGCCCGGTGGCCCACCTCCTCCCCCGCTTCCGCTCGCTCCCGACACATT
GGGCTTGGATTCGCTGGAGGTGTGCACGCTGGGGCTCTGTGATTTGTCCT
GCTCCTCGTGACCATTTGGCGTTTCTTCGTAGCGAACGTAGGGTTCGAAG
CTGTTGTTGATTTGCACAGATCCGCGATGCAGATTGTTGGACTCGGCCTC
GAAGAGAATCTCGTTGATGAAGCGTTCGGCCAGAAGACGCTGCTCGCGCG
GCAGTCGCTTCAGTTTGTGCGTCCAGGTGCGGGCGATGGACTCCTCCTCC
GGATATGTGCCAGCCAAATACTCGCAGGCTATGTTGAGTAGTTCGTCGGT
GTTGTGGGCGGTGCCTGTTGCACCTGGACCGCCAGTAGATCCGGCTCCTG
CTCCCGTACATGGCGGTGTTTGCCTGGCTCGCTTGCTGCTCCCATAATCC
ACATGGTTGGTTGCTGGCGGTGGCGGTGGCGGAGCTCCAAATGATTTGTG
AAACATCTCGGAAATGTTGGGCGTCTGACCACCAGCGCGTGGTGCTGGAT
AATGGAGGGCTGCTCCCTGGCTCTCCAGAAACGCACTCGGGCAATTGCTG
CTCTCACCGAAGGCGAAGTTGGGCTCGTTCTTAAAGGCGGGATTGACGGC
TAGAAACTTCTCCGAGTTGCGCAAAAAGTCCAGCTCCTGAAAGGTCCAGC
AGCGTGGACTGTGGAGGCTGCCCGATCG
BS15521.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:22:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-PA | 1047 | CG8281-RA | 286..1043 | 778..21 | 3640 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-RA | 1301 | CG8281-RA | 430..1191 | 778..17 | 3705 | 99.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7912892..7913653 | 778..17 | 3705 | 99.1 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:01:46 has no hits.
BS15521.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:29:03 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-PA | 286..1047 | 17..778 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:06:40 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-PA | 286..1047 | 17..778 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:23:37 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 430..1195 | 10..778 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:08 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 430..1195 | 10..778 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:08 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7912892..7913657 | 10..778 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:23:37 Download gff for
BS15521.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7905992..7906757 | 10..778 | 98 | | Minus |
BS15521.5prime Sequence
899 bp (812 high quality bases) assembled on 2006-12-21
> BS15521.5prime
GAAGTTATCCTTCGACATGCTGCCACAAACGCCGCCGCACGGATTGAAGG
TGATGTCGGGAGCGGAGGAGAACCGACACTATCTGCGCGCCTTCATCCAG
ACATACAGGGATCTGCCCGTGCTGTGGGACACATCGCTGCGGGACTACAC
CAATCGGGAGAAGCGGGCGGAGGCCTATCTGCGCCTGGTGCCCATATACC
ATTATCTCAAGCGGGACGCCACCGTGGAGGATGTGAAAAAGAAGATCAAC
ACACTGCGCACGAACTACCGCAAGGAGCTAAAGGTGGTGGAGAGTGCCCT
GCGATCGGGCAGCCTCCACAGTCCACGCTGCTGGACCTTTCAGGAGCTGG
ACTTTCTGCGCAACTCGGAGAAGTTTCTAGCCGTCAATCCCGCCTTTAAG
AACGAGCCCAACTTCGCCTTCGGTGAGAGCAGCAATTGCCCGAGTGCGTT
TCTGGAGAGCCAGGGAGCAGCCCTCCATTATCCAGCACCACGCGCTGGTG
GTCAGACGCCCAACATTTCCGAGATGTTTCACAAATCATTTGGAGCTCCG
CCACCGCCACCGCCAGCAACCAACCATGTGGATTATGGGAGCAGCAAGCG
AGCCAGGCAAACACCGCCATGTACGGGAGCAGGAGCCGGATCTACTGGCG
GTCCAGGTGCAACAGGCACCGCCCACAACACCGACGAACTACTCAACATA
GCCTGCGAGTATTTGGCTGGCACATATCCGGAGGAGGAGTCCATCGCCCG
CACCTGGACGCACAAACTGAAGCGACTGCCGCGCGAGCAGCGTCTTCTGG
CCGAACGCTTCATCAACGAGATTCTCTTCGAGGCCGAGTCCCACATCTGC
ATCGCGGATCTGTGCAAATCAACAACAGCTTCGAACCCTACGTTCGCTA
BS15521.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:22:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-PA | 1047 | CG8281-RA | 1..825 | 17..841 | 3975 | 99.2 | Plus |
CG8281-PA | 1047 | CG8281-RA | 830..884 | 845..899 | 275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:43:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-RA | 1301 | CG8281-RA | 145..1028 | 17..899 | 4290 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:43:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7912607..7913490 | 17..899 | 4265 | 99.1 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:43:43 has no hits.
BS15521.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:29:04 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-PA | 1..883 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:06:42 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-PA | 1..883 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:46:54 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1027 | 17..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:29:35 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8281-RA | 145..1027 | 17..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:29:35 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7912607..7913489 | 17..898 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:46:54 Download gff for
BS15521.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7905707..7906589 | 17..898 | 99 | | Plus |
BS15521.pep Sequence
Translation from 16 to 1062
> BS15521.pep
MLPQTPPHGLKVMSGAEENRHYLRAFIQTYRDLPVLWDTSLRDYTNREKR
AEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKVVESALRSGSL
HSPRCWTFQELDFLRNSEKFLAVNPAFKNEPNFAFGESSNCPSAFLESQG
AALHYPAPRAGGQTPNISEMFHKSFGAPPPPPPATNHVDYGSSKRARQTP
PCTGAGAGSTGGPGATGTAHNTDELLNIACEYLAGTYPEEESIARTWTHK
LKRLPREQRLLAERFINEILFEAESNNLHRGSVQINNSFEPYVRYEETPN
GHEEQDKSQSPSVHTSSESKPNVSGASGSGGGGGPPGSTTTSAGIREF*
BS15521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8281-PA | 348 | CG8281-PA | 1..348 | 1..348 | 1856 | 100 | Plus |
CG4004-PE | 319 | CG4004-PE | 16..105 | 23..115 | 166 | 34.4 | Plus |
CG4004-PD | 319 | CG4004-PD | 16..105 | 23..115 | 166 | 34.4 | Plus |
CG4004-PA | 319 | CG4004-PA | 16..105 | 23..115 | 166 | 34.4 | Plus |
CG4004-PB | 339 | CG4004-PB | 1..83 | 33..118 | 153 | 38.4 | Plus |