Clone Sequence Records
BS15593.complete Sequence
1127 bp assembled on 2009-12-07
GenBank Submission: KX801123
> BS15593.complete
GAAGTTATCAGTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTT
CCGGTGCCAGCCGGTGGACTACACAGATAGTCCCACATCCCGGAGAATGG
TTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATGGAT
ACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACTGCA
CGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCAAGT
TCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTCGTC
CACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCAGTA
CCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGGTCC
AGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGATTGC
AACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCATGTT
CTTCTTCCTGTTCAACGAGTTCTACAAGGCAGCCTACAGGAGCCGCATGA
TGAAAAAGAACGGAGCCCTGGCCAACGGACACGCCAAGCCCAATGGCTAC
TGCAAGAGCATCAACGCCCATGACGATCTGGCCATGCCACAGACCACGGA
GGCGACAGCGACAGCGACGCCCGCATCCAAGGCCAACGGGAGCAGCACCC
CGCCGAGCAATGGACATGCCAATGGGGTGGAGAACGTCTACAAGCAGGTG
GCCAACGGCAGCGCGCACAAGGGGTCCAACGGAGGACTGAGCAACGGGTA
TGCCACCAAGCTGCTGGACGACGCCTCCCAGGAGCTGAAACAGCGGAAGA
CGCCGAAATAAAAGCTTTCTAGACCAT
BS15593.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-RH | 1095 | CG31522-PH | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| CG31522-RG | 1095 | CG31522-PG | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| CG31522-RA | 1095 | CG31522-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-RH | 2213 | CG31522-RH | 322..1416 | 17..1111 | 5475 | 100 | Plus |
| CG31522-RG | 2352 | CG31522-RG | 461..1555 | 17..1111 | 5475 | 100 | Plus |
| CG31522-RA | 2460 | CG31522-RA | 569..1663 | 17..1111 | 5475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4442747..4443056 | 1111..802 | 1550 | 100 | Minus |
| 3R | 32079331 | 3R | 4443902..4444058 | 802..646 | 785 | 100 | Minus |
| 3R | 32079331 | 3R | 4444110..4444249 | 648..509 | 700 | 100 | Minus |
| 3R | 32079331 | 3R | 7982801..7983135 | 692..358 | 625 | 79.1 | Minus |
| 3R | 32079331 | 3R | 4444319..4444428 | 512..403 | 550 | 100 | Minus |
| 3R | 32079331 | 3R | 4446425..4446534 | 265..156 | 550 | 100 | Minus |
| 3R | 32079331 | 3R | 4446737..4446823 | 160..74 | 435 | 100 | Minus |
| 3R | 32079331 | 3R | 4446166..4446248 | 346..264 | 415 | 100 | Minus |
| 3R | 32079331 | 3R | 4467642..4467766 | 636..512 | 325 | 84 | Minus |
| 3R | 32079331 | 3R | 4447701..4447758 | 74..17 | 290 | 100 | Minus |
| 3R | 32079331 | 3R | 4444506..4444562 | 403..347 | 285 | 100 | Minus |
| 3R | 32079331 | 3R | 22555685..22555806 | 547..668 | 235 | 79.5 | Plus |
| 3R | 32079331 | 3R | 22559608..22559737 | 648..519 | 230 | 78.5 | Minus |
| 3R | 32079331 | 3R | 22532970..22533076 | 645..539 | 205 | 79.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:47:54 has no hits.
BS15593.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:25 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 544..1636 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:58:01 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 569..1661 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:54:51 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 544..1636 | 17..1109 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:00 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 569..1661 | 17..1109 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:00 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4442749..4443055 | 803..1109 | 100 | <- | Minus |
| 3R | 4443902..4444057 | 647..802 | 100 | <- | Minus |
| 3R | 4444112..4444248 | 510..646 | 100 | <- | Minus |
| 3R | 4444322..4444427 | 404..509 | 100 | <- | Minus |
| 3R | 4444506..4444562 | 347..403 | 100 | <- | Minus |
| 3R | 4446166..4446246 | 266..346 | 100 | <- | Minus |
| 3R | 4446425..4446532 | 158..265 | 100 | <- | Minus |
| 3R | 4446740..4446822 | 75..157 | 100 | <- | Minus |
| 3R | 4447701..4447758 | 17..74 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:58:01 Download gff for
BS15593.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 271888..271968 | 266..346 | 100 | <- | Minus |
| arm_3R | 272147..272254 | 158..265 | 100 | <- | Minus |
| arm_3R | 272462..272544 | 75..157 | 100 | <- | Minus |
| arm_3R | 273423..273480 | 17..74 | 100 | | Minus |
| arm_3R | 268471..268777 | 803..1109 | 100 | <- | Minus |
| arm_3R | 269624..269779 | 647..802 | 100 | <- | Minus |
| arm_3R | 269834..269970 | 510..646 | 100 | <- | Minus |
| arm_3R | 270044..270149 | 404..509 | 100 | <- | Minus |
| arm_3R | 270228..270284 | 347..403 | 100 | <- | Minus |
BS15593.3prime Sequence
937 bp (739 high quality bases) assembled on 2006-12-21
> BS15593.3prime
TCCCTTAAGGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTTATTTCTGC
GTCTTCCGCTGTTTCAGCTCCTGGGAGGCGTCGTCCAGCAGCTTGGTGGC
ATACCCGTTGCTCAGTCCTCCGTTGGACCCCTTGTGCGCGCTGCCGTTGG
CCACCTGCTTGTAGACGTTCTCCACCCCATTGGCATGTCCATTGCTCGGC
GGGGTGCTGCTCCCGTTGGCCTTGGATGCGGGCGTCGCTGTCGCTGTCGC
CTCCGTGGTCTGTGGCATGGCCAGATCGTCATGGGCGTTGATGCTCTTGC
AGTAGCCATTGGGCTTGGCGTGTCCGTTGGCCAGGGCTCCGTTCTTTTTC
ATCATGCGGCTCCTGTAGGCTGCCTTGTAGAACTCGTTGAACAGGAAGAA
GAACATGACGGCATGCATGCCAATCCACCAGACGAACGCCTTCGGGTAGT
TGCAATCGATGAAGAGCAGCTGGAAGGCGTGCACCATGATCAAGATGAAC
TGGACCATCTGCAGAGTGGTCAGGTACTTCTTCCACCAGAGGTATTTCTG
GTACTGCGGACCCATGGCGGAGAACATGTAGTAGGTGTACATCACGATGT
GGACGAAGGTGTTGAGCAGGCCGAAGAAGGTGCTGTGACCACCCGGTGTG
AACTTGACGCCGAACCAGACCGACATGGGCATGCAGCCGTGATGGATGAC
GTGCAGTGTGGTAACTTGGCTCGACTTCTTGCGCAACACGAAGAAAATCG
TATCCATGAATTCTGTAAACTTCGAGAAGTAGTACCACCAGCAGGCATGA
ACCATTCTCCGGGATGTGGGACTATCTGTGTAGTCCACGGGCTGGCACCG
GAAGCTGTACGAGCCCCACCAGCCGCCCATCAAGCACTCATAAAACAGCC
ATGCGCTAAATAAAACCTGTATGGCATTGTACATGAC
BS15593.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-PA | 1095 | CG31522-RA | 199..1095 | 937..41 | 4410 | 99.6 | Minus |
| CG31522-PD | 1098 | CG31522-RD | 334..1098 | 805..41 | 3800 | 99.8 | Minus |
| CG31522-PB | 1098 | CG31522-RB | 334..1098 | 805..41 | 3800 | 99.8 | Minus |
| CG31522-PD | 1098 | CG31522-RD | 199..249 | 937..887 | 230 | 98 | Minus |
| CG31522-PB | 1098 | CG31522-RB | 199..249 | 937..887 | 230 | 98 | Minus |
| CG31523-PC | 1065 | CG31523-RC | 555..623 | 584..516 | 195 | 91.3 | Minus |
| CG31523-PB | 1065 | CG31523-RB | 555..623 | 584..516 | 195 | 91.3 | Minus |
| CG31523-PA | 1065 | CG31523-RA | 555..623 | 584..516 | 195 | 91.3 | Minus |
| CG31523-PD | 1065 | CG31523-RD | 555..623 | 584..516 | 195 | 91.3 | Minus |
| CG31523-PC | 1065 | CG31523-RC | 428..461 | 711..678 | 145 | 97 | Minus |
| CG31523-PB | 1065 | CG31523-RB | 428..461 | 711..678 | 145 | 97 | Minus |
| CG31523-PA | 1065 | CG31523-RA | 428..461 | 711..678 | 145 | 97 | Minus |
| CG31523-PD | 1065 | CG31523-RD | 428..461 | 711..678 | 145 | 97 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:30:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-RH | 2213 | CG31522-RH | 520..1416 | 937..41 | 4440 | 99.7 | Minus |
| CG31522-RG | 2352 | CG31522-RG | 659..1555 | 937..41 | 4440 | 99.7 | Minus |
| CG31522-RA | 2460 | CG31522-RA | 767..1663 | 937..41 | 4440 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:30:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4442747..4443056 | 41..350 | 1535 | 99.7 | Plus |
| 3R | 32079331 | 3R | 4443902..4444058 | 350..506 | 785 | 100 | Plus |
| 3R | 32079331 | 3R | 4444110..4444249 | 504..643 | 700 | 100 | Plus |
| 3R | 32079331 | 3R | 7982801..7983135 | 460..794 | 625 | 79.1 | Plus |
| 3R | 32079331 | 3R | 4444319..4444428 | 640..749 | 550 | 100 | Plus |
| 3R | 32079331 | 3R | 4446166..4446248 | 806..888 | 400 | 98.8 | Plus |
| 3R | 32079331 | 3R | 4467642..4467766 | 516..640 | 325 | 84 | Plus |
| 3R | 32079331 | 3R | 4444506..4444562 | 749..805 | 285 | 100 | Plus |
| 3R | 32079331 | 3R | 4446425..4446475 | 887..937 | 240 | 98 | Plus |
| 3R | 32079331 | 3R | 22555685..22555806 | 605..484 | 235 | 79.5 | Minus |
| 3R | 32079331 | 3R | 22559608..22559737 | 504..633 | 230 | 78.5 | Plus |
| 3R | 32079331 | 3R | 22532970..22533076 | 507..613 | 205 | 79.4 | Plus |
Blast to na_te.dros performed on 2015-02-10 15:30:12 has no hits.
BS15593.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:14 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-PA | 199..1095 | 41..937 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:09:22 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-PA | 199..1095 | 41..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:30:42 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 767..1663 | 41..937 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:52:47 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 767..1663 | 41..937 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:52:47 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4444506..4444562 | 749..805 | 100 | <- | Plus |
| 3R | 4446166..4446246 | 806..886 | 98 | <- | Plus |
| 3R | 4446425..4446475 | 887..937 | 98 | | Plus |
| 3R | 4442747..4443055 | 41..349 | 99 | <- | Plus |
| 3R | 4443902..4444057 | 350..505 | 100 | <- | Plus |
| 3R | 4444112..4444248 | 506..642 | 100 | <- | Plus |
| 3R | 4444322..4444427 | 643..748 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:30:42 Download gff for
BS15593.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 270228..270284 | 749..805 | 100 | <- | Plus |
| arm_3R | 271888..271968 | 806..886 | 98 | <- | Plus |
| arm_3R | 272147..272197 | 887..937 | 98 | | Plus |
| arm_3R | 268469..268777 | 41..349 | 99 | <- | Plus |
| arm_3R | 269624..269779 | 350..505 | 100 | <- | Plus |
| arm_3R | 269834..269970 | 506..642 | 100 | <- | Plus |
| arm_3R | 270044..270149 | 643..748 | 100 | <- | Plus |
BS15593.5prime Sequence
806 bp (708 high quality bases) assembled on 2006-12-21
> BS15593.5prime
GAAGTTATCACTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGTGCTTGATGGGCGGCTGGTGGGGCTCGTACAGCTT
CCGGTGCCAGCCGGTGGACTACACAGATAGTCCCACATCCCGGAGAATGG
TTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATGGAT
ACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACTGCA
CGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCAAGT
TCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTCGTC
CACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCAGTA
CCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGGTCC
AGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGATTGC
AACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCATGTT
CTTCTTCCTGTTNCACGAGTTCTACAAGGCAGCCTACAGGAGCCGCATGA
TGAAAA
BS15593.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:23:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-PA | 1095 | CG31522-RA | 1..790 | 17..806 | 3906 | 99.7 | Plus |
| CG31522-PD | 1098 | CG31522-RD | 334..793 | 347..806 | 2256 | 99.5 | Plus |
| CG31522-PB | 1098 | CG31522-RB | 334..793 | 347..806 | 2256 | 99.5 | Plus |
| CG31522-PD | 1098 | CG31522-RD | 1..249 | 17..265 | 1245 | 100 | Plus |
| CG31522-PB | 1098 | CG31522-RB | 1..249 | 17..265 | 1245 | 100 | Plus |
| CG31522-PC | 231 | CG31522-RC | 1..58 | 17..74 | 290 | 100 | Plus |
| CG31523-PC | 1065 | CG31523-RC | 555..623 | 568..636 | 195 | 91.3 | Plus |
| CG31523-PB | 1065 | CG31523-RB | 555..623 | 568..636 | 195 | 91.3 | Plus |
| CG31523-PA | 1065 | CG31523-RA | 555..623 | 568..636 | 195 | 91.3 | Plus |
| CG31523-PD | 1065 | CG31523-RD | 555..623 | 568..636 | 195 | 91.3 | Plus |
| CG31523-PC | 1065 | CG31523-RC | 428..461 | 441..474 | 145 | 97 | Plus |
| CG31523-PB | 1065 | CG31523-RB | 428..461 | 441..474 | 145 | 97 | Plus |
| CG31523-PA | 1065 | CG31523-RA | 428..461 | 441..474 | 145 | 97 | Plus |
| CG31523-PD | 1065 | CG31523-RD | 428..461 | 441..474 | 145 | 97 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:52:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-RH | 2213 | CG31522-RH | 322..1111 | 17..806 | 3924 | 99.7 | Plus |
| CG31522-RG | 2352 | CG31522-RG | 461..1250 | 17..806 | 3924 | 99.7 | Plus |
| CG31522-RA | 2460 | CG31522-RA | 569..1358 | 17..806 | 3924 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4443902..4444058 | 802..646 | 759 | 98.7 | Minus |
| 3R | 32079331 | 3R | 4444110..4444249 | 648..509 | 700 | 100 | Minus |
| 3R | 32079331 | 3R | 7982801..7983135 | 692..358 | 625 | 79.1 | Minus |
| 3R | 32079331 | 3R | 4444319..4444428 | 512..403 | 550 | 100 | Minus |
| 3R | 32079331 | 3R | 4446425..4446534 | 265..156 | 550 | 100 | Minus |
| 3R | 32079331 | 3R | 4446737..4446823 | 160..74 | 435 | 100 | Minus |
| 3R | 32079331 | 3R | 4446166..4446248 | 346..264 | 415 | 100 | Minus |
| 3R | 32079331 | 3R | 4467642..4467766 | 636..512 | 325 | 84 | Minus |
| 3R | 32079331 | 3R | 4447701..4447758 | 74..17 | 290 | 100 | Minus |
| 3R | 32079331 | 3R | 4444506..4444562 | 403..347 | 285 | 100 | Minus |
| 3R | 32079331 | 3R | 22555685..22555806 | 547..668 | 235 | 79.5 | Plus |
| 3R | 32079331 | 3R | 22559608..22559737 | 648..519 | 230 | 78.5 | Minus |
| 3R | 32079331 | 3R | 22532970..22533076 | 645..539 | 205 | 79.4 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:52:33 has no hits.
BS15593.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:15 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-PA | 1..786 | 17..802 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:09:24 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-PA | 1..786 | 17..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:49:35 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 564..1354 | 10..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:31:53 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31522-RA | 564..1354 | 10..802 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:31:53 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4443902..4444057 | 647..802 | 98 | <- | Minus |
| 3R | 4444112..4444248 | 510..646 | 100 | <- | Minus |
| 3R | 4444322..4444427 | 404..509 | 100 | <- | Minus |
| 3R | 4444506..4444562 | 347..403 | 100 | <- | Minus |
| 3R | 4446166..4446246 | 266..346 | 100 | <- | Minus |
| 3R | 4446425..4446532 | 158..265 | 100 | <- | Minus |
| 3R | 4446740..4446822 | 75..157 | 100 | <- | Minus |
| 3R | 4447701..4447763 | 10..74 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:49:35 Download gff for
BS15593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 269624..269779 | 647..802 | 98 | <- | Minus |
| arm_3R | 269834..269970 | 510..646 | 100 | <- | Minus |
| arm_3R | 270044..270149 | 404..509 | 100 | <- | Minus |
| arm_3R | 270228..270284 | 347..403 | 100 | <- | Minus |
| arm_3R | 271888..271968 | 266..346 | 100 | <- | Minus |
| arm_3R | 272147..272254 | 158..265 | 100 | <- | Minus |
| arm_3R | 272462..272544 | 75..157 | 100 | <- | Minus |
| arm_3R | 273423..273485 | 10..74 | 95 | | Minus |
BS15593.pep Sequence
Translation from 16 to 1110
> BS15593.pep
MALIMKYIDSISRYMDSHSDSRTKGWPMMSSPFPTLAVCLTYVYLVKVLG
PRLMENRKPLNLQNTLVMYNAIQVVFSAWLFYECLMGGWWGSYSFRCQPV
DYTDSPTSRRMVHACWWYYFSKFTEFMDTIFFVLRKKSSQVTTLHVIHHG
CMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYMFSAMGPQYQKYLW
WKKYLTTLQMVQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLFN
EFYKAAYRSRMMKKNGALANGHAKPNGYCKSINAHDDLAMPQTTEATATA
TPASKANGSSTPPSNGHANGVENVYKQVANGSAHKGSNGGLSNGYATKLL
DDASQELKQRKTPK*
BS15593.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31522-PH | 364 | CG31522-PH | 1..364 | 1..364 | 1990 | 100 | Plus |
| CG31522-PG | 364 | CG31522-PG | 1..364 | 1..364 | 1990 | 100 | Plus |
| CG31522-PA | 364 | CG31522-PA | 1..364 | 1..364 | 1990 | 100 | Plus |
| CG31522-PI | 392 | CG31522-PI | 1..392 | 1..364 | 1951 | 92.9 | Plus |
| CG31522-PF | 365 | CG31522-PF | 1..365 | 1..364 | 1904 | 96.4 | Plus |
