Clone BS15594 Report

Search the DGRC for BS15594

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:155
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptdmGlut-RA
Protein status:BS15594.pep: full length peptide match
Sequenced Size:1523

Clone Sequence Records

BS15594.complete Sequence

1523 bp assembled on 2009-12-07

GenBank Submission: KX801858

> BS15594.complete
GAAGTTATCAGTCGACATGACGCAACAGCCACAATGGGGCATAAGCCTAT
CGAGGTATTTCGTGATACCCCAGCGAGTGATCCTGGCCATCATGGGCTTC
TTGGCCATCCTGAATGCCTACACGATGCGCGTCTGTCTATCACAGGCCAT
CACGGTGCTGGTGGTCAAGAAGAACTCAACGGATGACGATTCTGAGGCGA
TCTGCGAACCCGATGACATCGACGAGGGAACCAGTGTTGGTGGCGATTTC
GAATGGTCCGAGGAGCTGCAAGGTTTGATCCTGTCCTCATTCTACATCGG
TTACATTGTCACCCACATTCCCGGCGGTCTGCTGGCCGAGAAGTTCGGTG
GCAAATGGACCCTGGGCCTTGGCATTCTGTCCACCGCCGTGTTCACCATG
CTAACGCCTTTGGCCATTAACAAGGGTGACTCCGACTGGCTGATTGTGAC
CCGAGTTCTGATGGGTCTGGGCGAGGGAACCACCTTCCCCGCTTTGAGTG
TCCTCCTAGCTGCTTGGGTTCCGGCCAACGAACGTGGAAAGCTCGGTGCT
CTGGTGCTGGGTGGCGGTCAAGTGGGTACTATCATGGGCAACCTGTTGTC
TGGCGTGTTTATAGACGCCTATGGTTGGGAGTTTGTCTTCTACTTCTTCG
GGGGTCTGGGTGTTGTCTGGTTTGCCATCTTTATGTTCCTCTGCTACAGC
GATCCCACGTCGCATCCCTTCATCAAGCCCAGCGAGCGCGAGTATCTGGT
CAAGGAGATTGGAACCATTAGCCGCAACGAGGACCTGCCCCCCACTCCCT
GGAAGGCCATCCTCACCAACCTGCCCATGTTTGCCCTGGTGGCCGCCCAG
ATTGGTCACGATTGGGGCTTCTACATCATGGTGACGGATCTGCCGAAGTA
CATGGCCGACGTTCTTCAGTTCTCGATCAAGGCCAACGGTCTTTACTCCT
CGCTGCCCTACGTCATGATGTGGATCGTTTCCGTGGGCAGTGGCTTTGTG
GCCGATTGGATGATCCGCCGTGGCGTGTTGAGCACCACAAACACCCGAAA
GGTGATGACTGGTCTGGCTGCCTTCGGTCCGGCCATCTTCATGGTGGGCG
CCTCCTACGCCGGCTGCGATCGTGTCCTCGTCGTGGTGCTCTTCACCATC
TGCATGGGTCTGATGGGCGCCTACTATGCGGGCATGAAGCTGAGTCCCCT
GGACATGAGTCCGAACTATGCCGGAACGCTCATGGCCATCACAAACGGAA
TTGGAGCAATCACCGGAGTGATCACGCCGTACCTGGTGGGCGTGATGACA
CCAAATGCCTCGCTGCTGGAGTGGCGTCTTGTGTTCTGGGTGGCCTTTGG
CGTGCTCTGCTTCACTGCCGTGATCTACTGCATTTGGGCATCCGGAGAGG
TGCAGCCGTTCAATAACGCACCCATCCAGCCGCGCTCCGTCGACTTTGAG
GCACAGGAGCGCAAGGTGGGTGGTGAAAAGACAAGTGGTCTGGAGCAGAG
CTCGTAAAAGCTTTCTAGACCAT

BS15594.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-RA 1491 CG5304-PA 1..1491 17..1507 7455 100 Plus
CG9254-RA 1446 CG9254-PA 850..1407 857..1414 690 74.9 Plus
CG9254-RA 1446 CG9254-PA 22..167 29..174 280 79.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-RA 2426 CG5304-RA 341..1835 13..1507 7460 99.9 Plus
CG9254-RA 1684 CG9254-RA 1039..1596 857..1414 690 74.9 Plus
CG9254-RA 1684 CG9254-RA 211..356 29..174 280 79.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12032646..12033270 683..1307 3125 100 Plus
2L 23513712 2L 12032131..12032577 236..682 2235 100 Plus
2L 23513712 2L 12033331..12033531 1307..1507 1005 100 Plus
2L 23513712 2L 12031893..12032073 57..237 905 100 Plus
2L 23513712 2L 13595591..13596148 1414..857 690 74.9 Minus
2L 23513712 2L 13596831..13596976 174..29 280 79.5 Minus
2L 23513712 2L 12027778..12027821 13..56 205 97.7 Plus
Blast to na_te.dros performed on 2014-11-28 01:53:01 has no hits.

BS15594.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:44:26 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)01810-RA 331..1833 7..1507 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:27 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 345..1833 17..1505 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:25:49 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)01810-RA 343..1831 17..1505 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:07 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 345..1833 17..1505 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:07 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12027782..12027821 17..56 100 -> Plus
2L 12031893..12032071 57..235 100 -> Plus
2L 12032131..12032577 236..682 100 -> Plus
2L 12032646..12033269 683..1306 100 -> Plus
2L 12033331..12033529 1307..1505 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:27 Download gff for BS15594.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12027782..12027821 17..56 100 -> Plus
arm_2L 12031893..12032071 57..235 100 -> Plus
arm_2L 12032131..12032577 236..682 100 -> Plus
arm_2L 12032646..12033269 683..1306 100 -> Plus
arm_2L 12033331..12033529 1307..1505 100   Plus

BS15594.3prime Sequence

815 bp (727 high quality bases) assembled on 2006-12-21

> BS15594.3prime
ATGGTCTAGAAAGCTTTTACCATCTCTGCTCCAGACCACTTGTCTTTTCA
CCACCCACCTTGCGCTCCTGTGCCTCAAAGTCGACGGAGCGCGGCTGGAT
GGGTGCGTTATTGAACGGCTGCACCTCTCCGGATGCCCAAATGCAGTAGA
TCACGGCAGTGAAGCAGAGCACGCCAAAGGCCACCCAGAACACAAGACGC
CACTCCAGCAGCGAGGCATTTGGTGTCATCACGCCCACCAGGTACGGCGT
GATCACTCCGGTGATTGCTCCAATTCCGTTTGTGATGGCCATGAGCGTTC
CGGCATAGTTCGGACTCATGTCCAGGGGACTCAGCTTCATGCCCGCATAG
TAGGCGCCCATCAGACCCATGCAGATGGTGAAGAGCACCACGACGAGGAC
ACGATCGCAGCCGGCGTAGGAGGCGCCCACCATGAAGATGGCCGGACCGA
AGGCAGCCAGACCAGTCATCACCTTTCGGGTGTTTGTGGTGCTCAACACG
CCACGGCGGATCATCCAATCGGCCACAAAGCCACTGCCCACGGAAACGAT
CCACATCATGACGTAGGGCAGCGAGGAGTAAAGACCGTTGGCCTTGATCG
AGAACTGAAGAACGTCGGCCATGTACTTCGGCAGATCCGTCACCATGATG
TAGAAGCCCCAATCGTGACCAATCTGGGCGGCCACCAGGGCAAACATGGG
CAGGTTGGTGAGGATGGCCTTCCAGGGAGTGGGGGGCAGGTCCTCGTTGC
GGCTAATGGTTCCAATCTCCTTGACCAGATACTCGCGCTCGCTGGGCTTG
ATGAANGGATGCGAC

BS15594.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5304-PA 1491 l(2)01810-RA 693..1484 815..24 3941 99.8 Minus
CG9254-PA 1446 CG9254-RA 1146..1184 371..333 145 94.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 03:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-RA 2426 CG5304-RA 1037..1835 815..17 3954 99.6 Minus
CG9254-RA 1684 CG9254-RA 1039..1596 667..110 690 75.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 03:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12032672..12033270 815..217 2984 99.8 Minus
2L 23513712 2L 12033331..12033531 217..17 975 99 Minus
2L 23513712 2L 13595591..13596148 110..667 690 74.9 Plus
Blast to na_te.dros performed on 2015-01-31 03:28:58 has no hits.

BS15594.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:16 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5304-PA 693..1491 17..815 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:09:25 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5304-PA 693..1491 17..815 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:48:21 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 1037..1835 17..815 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 05:21:18 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 1037..1835 17..815 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:21:18 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 12032672..12033269 218..815 99 -> Minus
2L 12033331..12033531 17..217 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:48:21 Download gff for BS15594.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12032672..12033269 218..815 99 -> Minus
arm_2L 12033331..12033531 17..217 99   Minus

BS15594.5prime Sequence

800 bp (799 high quality bases) assembled on 2006-12-21

> BS15594.5prime
GAAGTTATCAGTCGACATGACGCAACAGCCACAATGGGGCATAAGCCTAT
CGAGGTATTTCGTGATACCCCAGCGAGTGATCCTGGCCATCATGGGCTTC
TTGGCCATCCTGAATGCCTACACGATGCGCGTCTGTCTATCACAGGCCAT
CACGGTGCTGGTGGTCAAGAAGAACTCAACGGATGACGATTCTGAGGCGA
TCTGCGAACCCGATGACATCGACGAGGGAACCAGTGTTGGTGGCGATTTC
GAATGGTCCGAGGAGCTGCAAGGTTTGATCCTGTCCTCATTCTACATCGG
TTACATTGTCACCCACATTCCCGGCGGTCTGCTGGCCGAGAAGTTCGGTG
GCAAATGGACCCTGGGCCTTGGCATTCTGTCCACCGCCGTGTTCACCATG
CTAACGCCTTTGGCCATTAACAAGGGTGACTCCGACTGGCTGATTGTGAC
CCGAGTTCTGATGGGTCTGGGCGAGGGAACCACCTTCCCCGCTTTGAGTG
TCCTCCTAGCTGCTTGGGTTCCGGCCAACGAACGTGGAAAGCTCGGTGCT
CTGGTGCTGGGTGGCGGTCAAGTGGGTACTATCATGGGCAACCTGTTGTC
TGGCGTGTTTATAGACGCCTATGGTTGGGAGTTTGTCTTCTACTTCTTCG
GGGGTCTGGGTGTTGTCTGGTTTGCCATCTTTATGTTCCTCTGCTACAGC
GATCCCACGTCGCATCCCTTCATCAAGCCCAGCGAGCGCGAGTATCTGGT
CAAGGAGATTGGAACCATTAGCCGCAACGAGGACCTGCCCCCCACTCCCT

BS15594.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG5304-PA 1491 l(2)01810-RA 1..784 17..800 3920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:11:51
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-RA 2426 CG5304-RA 341..1128 13..800 3925 99.9 Plus
CG9254-RA 1684 CG9254-RA 211..356 29..174 280 79.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:11:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12032131..12032577 236..682 2235 100 Plus
2L 23513712 2L 12031893..12032073 57..237 905 100 Plus
2L 23513712 2L 12032646..12032763 683..800 590 100 Plus
2L 23513712 2L 13596831..13596976 174..29 280 79.5 Minus
2L 23513712 2L 12027778..12027821 13..56 205 97.7 Plus
Blast to na_te.dros performed 2015-02-02 14:11:47
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle2 7220 HMS-Beagle2 Beagle2 7220bp 1827..1877 373..422 108 70.6 Plus

BS15594.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:17 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5304-PA 1..784 17..800 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:09:27 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5304-PA 1..784 17..800 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:15:16 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 333..1128 7..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:52:05 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
dmGlut-RA 333..1128 7..800 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:52:05 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 12027770..12027821 7..56 92 -> Plus
2L 12031893..12032071 57..235 100 -> Plus
2L 12032131..12032577 236..682 100 -> Plus
2L 12032646..12032763 683..800 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:15:16 Download gff for BS15594.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12031893..12032071 57..235 100 -> Plus
arm_2L 12032646..12032763 683..800 100   Plus
arm_2L 12027770..12027821 7..56 92 -> Plus
arm_2L 12032131..12032577 236..682 100 -> Plus

BS15594.pep Sequence

Translation from 16 to 1506

> BS15594.pep
MTQQPQWGISLSRYFVIPQRVILAIMGFLAILNAYTMRVCLSQAITVLVV
KKNSTDDDSEAICEPDDIDEGTSVGGDFEWSEELQGLILSSFYIGYIVTH
IPGGLLAEKFGGKWTLGLGILSTAVFTMLTPLAINKGDSDWLIVTRVLMG
LGEGTTFPALSVLLAAWVPANERGKLGALVLGGGQVGTIMGNLLSGVFID
AYGWEFVFYFFGGLGVVWFAIFMFLCYSDPTSHPFIKPSEREYLVKEIGT
ISRNEDLPPTPWKAILTNLPMFALVAAQIGHDWGFYIMVTDLPKYMADVL
QFSIKANGLYSSLPYVMMWIVSVGSGFVADWMIRRGVLSTTNTRKVMTGL
AAFGPAIFMVGASYAGCDRVLVVVLFTICMGLMGAYYAGMKLSPLDMSPN
YAGTLMAITNGIGAITGVITPYLVGVMTPNASLLEWRLVFWVAFGVLCFT
AVIYCIWASGEVQPFNNAPIQPRSVDFEAQERKVGGEKTSGLEQSS*

BS15594.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
dmGlut-PA 496 CG5304-PA 1..496 1..496 2597 100 Plus
CG9254-PA 481 CG9254-PA 6..470 3..467 1793 71.3 Plus
Picot-PD 516 CG8098-PD 17..482 3..467 903 39.7 Plus
Picot-PC 516 CG8098-PC 17..482 3..467 903 39.7 Plus
Picot-PA 516 CG8098-PA 17..482 3..467 903 39.7 Plus