Clone BS15614 Report

Search the DGRC for BS15614

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptSpn77Bc-RA
Protein status:BS15614.pep: full length peptide match
Sequenced Size:1283

Clone Sequence Records

BS15614.complete Sequence

1283 bp assembled on 2009-12-07

GenBank Submission: KX805630

> BS15614.complete
GAAGTTATCAGTCGACATGAAGCTCGGATTTCTGGGCCTTTTTGGCATGG
TGCTCAGTTTGCGGGCCCATATATGTGCAAATACTGTTGATACGAAGAGT
CTATTACAAAAAATGACGGACGCAAGGCTTCAATTTGCCCTCAACCTGCT
GCAAATGGAATCCACGCATTTAAACCTGGAAAACTTTGCGATGACGCCAT
TTTCCACGTGGTCACTTATGATCATGTTCTACGAGGGAGCAGAGGGGACT
ACCTTGAAGCAGATACGTGATGTCCTGGCGATCTATGTCGATTATCCAAC
ACTGCGCAGGTGGTACGAGGATGTCCGAGCTTATCACTATTTAAATTCGG
AAAACACAAAACTGTTTTCGCTGCGTTACGCTTACTACGACGATGTAGGA
GATTTAGAACTCGTGAAAGGGTACAACAGTGTAGTCCTAGAAGGAGTAGG
AGAAGGAAATGTGGTTCTTCGAGAGGGTCGGCCAAGGGGTGTGGACTTCG
ACCAGGGGGCGAGTATAATTATCAACGACGATATCGACAAAGCCTCTCAT
GCGAAAATCTTCAGTTCTTATAGCCGTCGTTCGTTCAATAGTACAGTAAC
TGTGCTGGGGATTACTGTTAGCTACTTTAAGGCCAAATGGAAGTATCCAT
TCGATAAGTCCCAGACGAAAGTGGAACAGTTTTACAACGCCGGCGGCTCG
CCGGCAGGTAAGGTGGAGATGATGGTGCAAACGGGGAAGTATGCCTACGT
CAATAATGTAAAGGGTCTGCAAGCGGATGTCCTGGAGCTACCTTTTGGGG
AACATGAGCTAGTAATGATCGTCATACTGCCGAAGCCTTCCCAGAGAGTA
AGCCTGGTGCTCAAACAATTGAAGAACCTGGGACTACATCGCCTCCTTGA
GGAACTCGAGGCCTCCAAGAATGAATCTGATGTAGAAGTCAAGCTTCCCA
AGTTCGATACGCGATCCGTACTTTCACTCGAAGATACCGTATATGAGGCT
GGACTAACGGATCTGAGAAATGAGTTCGCAGATCTAGGTCGCATGCTGAT
TCCTACCGGGGACAGAGGTGCGTACCTCTCCCTCTACCACCAATTCGCCA
GGATCGTCGTAGATGAAGAGGGCTTGCCTAATGCTGTTCCGCAGAAATCT
TCTGGAACAAATAACATCAAGTTCCATATAAACAGGCCGTTTGCATACCT
TGTCCTACAAAGAACACACAAATTGCTCATTCACTCCGGAGTCTTTCGGG
AAGGTGAGATCCAGTAAAAGCTTTCTAGACCAT

BS15614.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:27:49
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1251 CG6289-PB 1..1251 17..1267 6255 100 Plus
Spn77Bc-RA 1251 CG6289-PA 1..1251 17..1267 6255 100 Plus
Spn77Bb-RA 1089 CG6663-PA 40..1089 218..1267 4560 95.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1430 CG6289-RB 40..1290 17..1267 6255 100 Plus
Spn77Bc-RA 1440 CG6289-RA 50..1300 17..1267 6255 100 Plus
Spn77Bb-RA 1161 CG6663-RA 74..1123 218..1267 4560 95.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20343497..20343853 642..998 1785 100 Plus
3L 28110227 3L 20342738..20343060 17..339 1615 100 Plus
3L 28110227 3L 20321638..20321992 642..996 1610 96.9 Plus
3L 28110227 3L 20343128..20343431 340..643 1520 100 Plus
3L 28110227 3L 20321269..20321572 340..643 1490 99.3 Plus
3L 28110227 3L 20343908..20344179 996..1267 1360 100 Plus
3L 28110227 3L 20322049..20322320 996..1267 1045 92.3 Plus
3L 28110227 3L 20321080..20321201 218..339 445 91 Plus
3L 28110227 3L 20321041..20321080 17..56 185 97.5 Plus
Blast to na_te.dros performed on 2014-11-28 02:27:48 has no hits.

BS15614.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:50:17 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
CG6289-RA 33..1281 17..1265 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:45 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..1298 17..1265 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:07 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
CG6289-RA 33..1281 17..1265 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:11:57 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..1298 17..1265 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:11:57 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20342738..20343060 17..339 100 -> Plus
3L 20343128..20343431 340..643 100 -> Plus
3L 20343499..20343852 644..997 100 -> Plus
3L 20343910..20344177 998..1265 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:45 Download gff for BS15614.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20335838..20336160 17..339 100 -> Plus
arm_3L 20336228..20336531 340..643 100 -> Plus
arm_3L 20336599..20336952 644..997 100 -> Plus
arm_3L 20337010..20337277 998..1265 100   Plus

BS15614.3prime Sequence

758 bp (712 high quality bases) assembled on 2006-12-21

> BS15614.3prime
ATGGTCTAGAAAGCTTTTACTCTTTCTCACCTTCCCGAAAGACTCCGGAG
TGAATGAGCAATTTGTGTGTTCTTTGTAGGACAAGGTATGCAAACTCTCT
GTTTATATGGAACTTGATGTTATTTGTTCCAGAAGATTTCTGCGGAACAG
CATTAGGCAAGCCCTCTTCATCTACGACGATCCTGGCGAATTGGTGGTAG
AGGGAGAGGTACGCACCTCTGTCCCCGGTAGGAATCAGCATGCGACCTAG
ATCTGCGAACTCATTTCTCAGATCCGTTAGTCCAGCCTCATATACGGTAT
CTTCGAGTGAAAGTACGGATCGCGTATCGAACTTGGGAAGCTTGACTTCT
ACATCAGATTCATTCTTGGAGGCCTCGAGTTCCTCAAGGAGGCGATGTAG
TCCCAGGTTCTTCAATTGTTTGAGCACCAGGCTTACTCTCTGGGAAGGCT
TCGGCAGTATGACGATCATTACTAGCTCATGTTCCCCAAAAGGTAGCTCC
AGGACATCCGCTTGCAGACCCTTTACATTATTGACGTAGGCATACTTCCC
CGTTTGCACCATCATCTCCACCTTACCTGCCGGCGAGCCGCCGGCGTTGT
AAAACTGTTCCACTTTCGTCTGGGACTTATCGAATGGATACTTCCATTTG
GCCTTAAAGTAGCTAACAGTAATCCCCAGCACAGTTACTGTACTATTGAA
CGAACGACGGCTATAAGAACTGAAGATTTTCGCATGAGAGGCTTTGTCGA
TATCGTCG

BS15614.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG6289-PA 1251 CG6289-RA 510..1169 758..99 3300 100 Minus
CG6663-PA 1089 CG6663-RA 348..859 758..247 2185 97 Minus
CG6663-PA 1089 CG6663-RA 884..1007 222..99 470 95.1 Minus
CG6289-PA 1251 CG6289-RA 1173..1243 95..25 355 100 Minus
CG6663-PA 1089 CG6663-RA 1038..1081 68..25 220 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 21:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1430 CG6289-RB 549..1282 758..25 3625 99.6 Minus
Spn77Bc-RA 1440 CG6289-RA 559..1292 758..25 3625 99.6 Minus
Spn77Bb-RA 1161 CG6663-RA 382..1115 758..25 3130 95.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 21:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20343497..20343853 642..286 1785 100 Minus
3L 28110227 3L 20321638..20321992 642..288 1610 96.9 Minus
3L 28110227 3L 20343908..20344171 288..25 1275 98.9 Minus
3L 28110227 3L 20322049..20322312 288..25 960 90.9 Minus
3L 28110227 3L 20321455..20321572 758..641 590 100 Minus
3L 28110227 3L 20343314..20343431 758..641 590 100 Minus
Blast to na_te.dros performed on 2015-02-05 21:25:12 has no hits.

BS15614.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:51 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6289-PA 510..1251 17..758 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:08 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6289-PA 510..1251 17..758 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:20:03 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 559..1300 17..758 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:21:55 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 559..1300 17..758 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:21:55 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20343314..20343431 641..758 100 -> Minus
3L 20343499..20343852 287..640 100 -> Minus
3L 20343910..20344179 17..286 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:20:03 Download gff for BS15614.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20336414..20336531 641..758 100 -> Minus
arm_3L 20336599..20336952 287..640 100 -> Minus
arm_3L 20337010..20337279 17..286 97   Minus

BS15614.5prime Sequence

848 bp (793 high quality bases) assembled on 2006-12-21

> BS15614.5prime
GAAGTTATCCTTCGACATGAAGCTCGGATTTCTGGGCCTTTTTGGCATGG
TGCTCAGTTTGCGGGCCCATATATGTGCAAATACTGTTGATACGAAGAGT
CTATTACAAAAAATGACGGACGCAAGGCTTCAATTTGCCCTCAACCTGCT
GCAAATGGAATCCACGCATTTAAACCTGGAAAACTTTGCGATGACGCCAT
TTTCCACGTGGTCACTTATGATCATGTTCTACGAGGGAGCAGAGGGGACT
ACCTTGAAGCAGATACGTGATGTCCTGGCGATCTATGTCGATTATCCAAC
ACTGCGCAGGTGGTACGAGGATGTCCGAGCTTATCACTATTTAAATTCGG
AAAACACAAAACTGTTTTCGCTGCGTTACGCTTACTACGACGATGTAGGA
GATTTAGAACTCGTGAAAGGGTACAACAGTGTAGTCCTAGAAGGAGTAGG
AGAAGGAAATGTGGTTCTTCGAGAGGGTCGGCCAAGGGGTGTGGACTTCG
ACCAGGGGGCGAGTATAATTATCAACGACGATATCGACAAAGCCTCTCAT
GCGAAAATCTTCAGTTCTTATAGCCGTCGTTCGTTCAATAGTACAGTAAC
TGTGCTGGGGATTACTGTTAGCTACTTTAAGGCCAAATGGAAGTATCCAT
TCGATAAGTCCCAGACGAAAGTGGAACAGTTTTACAACGCCGGCGGCTCG
CCGGCAGGTAAGGTGGAGATGATGGTGCAAACGGGGAAGTATGCCTACGT
CAATAATGTAAAGGGTCTGCAAGCGGATGTCCTGGAGCTACCTTTTGGGG
AACATGAGCTAGTAATGATCGTCATACTGCCGAAAGCCTTCCAGAGAG

BS15614.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG6289-PA 1251 CG6289-RA 1..818 17..834 4090 100 Plus
CG6663-PA 1089 CG6663-RA 91..656 269..834 2705 99.1 Plus
CG6663-PA 1089 CG6663-RA 1..40 17..56 175 97.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 02:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-RB 1430 CG6289-RB 40..871 17..848 4115 99.8 Plus
Spn77Bc-RA 1440 CG6289-RA 50..881 17..848 4115 99.8 Plus
Spn77Bb-RA 1161 CG6663-RA 74..690 218..834 2860 97.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 02:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20342738..20343060 17..339 1615 100 Plus
3L 28110227 3L 20343128..20343431 340..643 1520 100 Plus
3L 28110227 3L 20321269..20321572 340..643 1490 99.3 Plus
3L 28110227 3L 20343497..20343703 642..848 975 98.1 Plus
3L 28110227 3L 20321638..20321830 642..834 935 99 Plus
3L 28110227 3L 20321080..20321201 218..339 445 91 Plus
3L 28110227 3L 20321041..20321080 17..56 185 97.5 Plus
Blast to na_te.dros performed on 2015-01-30 02:30:31 has no hits.

BS15614.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:52 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6289-PA 1..832 17..848 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:10 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6289-PA 1..832 17..848 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 05:28:12 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..881 17..848 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:02:29 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
Spn77Bc-RA 50..881 17..848 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 04:02:29 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20342738..20343060 17..339 100 -> Plus
3L 20343128..20343431 340..643 100 -> Plus
3L 20343499..20343703 644..848 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:28:12 Download gff for BS15614.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20335838..20336160 17..339 100 -> Plus
arm_3L 20336228..20336531 340..643 100 -> Plus
arm_3L 20336599..20336803 644..848 99   Plus

BS15614.pep Sequence

Translation from 16 to 1266

> BS15614.pep
MKLGFLGLFGMVLSLRAHICANTVDTKSLLQKMTDARLQFALNLLQMEST
HLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWY
EDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEGNVV
LREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGIT
VSYFKAKWKYPFDKSQTKVEQFYNAGGSPAGKVEMMVQTGKYAYVNNVKG
LQADVLELPFGEHELVMIVILPKPSQRVSLVLKQLKNLGLHRLLEELEAS
KNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADLGRMLIPTGDR
GAYLSLYHQFARIVVDEEGLPNAVPQKSSGTNNIKFHINRPFAYLVLQRT
HKLLIHSGVFREGEIQ*

BS15614.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:03:59
Subject Length Description Subject Range Query Range Score Percent Strand
Spn77Bc-PB 416 CG6289-PB 1..416 1..416 2132 100 Plus
Spn77Bc-PA 416 CG6289-PA 1..416 1..416 2132 100 Plus
Spn77Bb-PA 362 CG6663-PA 13..362 67..416 1664 92 Plus
Spn77Ba-PC 450 CG6680-PC 79..445 40..411 472 33.3 Plus
Spn77Ba-PB 450 CG6680-PB 79..445 40..411 472 33.3 Plus