Clone BS15616 Report

Search the DGRC for BS15616

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptMf-RC
Protein status:BS15616.pep: full length peptide match
Sequenced Size:539

Clone Sequence Records

BS15616.complete Sequence

539 bp assembled on 2010-02-09

GenBank Submission: KX803032

> BS15616.complete
GAAGTTATCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAATTCCAGCTAACTACGACGCAGAGAAGGCCTGGA
ATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACCCATCTCGC
TATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCGCTGGTGCC
CCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAACAAGGGTA
AGGATATCAAAGACATTTTCTAAAAGCTTTCTAGACCAT

BS15616.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 507 CG6803-PQ 1..507 17..523 2535 100 Plus
Mf-RC 507 CG6803-PC 1..507 17..523 2535 100 Plus
Mf-RM 1095 CG6803-PM 1..481 17..497 2405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:00:04
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..622 17..524 2540 100 Plus
Mf-RC 824 CG6803-RC 115..622 17..524 2540 100 Plus
Mf-RM 1939 CG553-RM 115..595 17..497 2405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 317..107 1055 100 Minus
3R 32079331 3R 15176157..15176295 524..386 695 100 Minus
3R 32079331 3R 15179038..15179129 108..17 460 100 Minus
3R 32079331 3R 15176362..15176437 389..314 365 98.7 Minus
Blast to na_te.dros performed on 2014-11-27 11:00:02 has no hits.

BS15616.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:20 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 1..507 17..523 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:31 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..619 22..521 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:22:58 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..619 22..521 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:32:46 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..619 22..521 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:36:14 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 120..619 22..521 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:36:14 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15176160..15176293 388..521 100 <- Minus
3R 15176364..15176433 318..387 100 <- Minus
3R 15178280..15178489 108..317 100 <- Minus
3R 15179039..15179124 22..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:22:58 Download gff for BS15616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001882..11002015 388..521 100 <- Minus
arm_3R 11002086..11002155 318..387 100 <- Minus
arm_3R 11004002..11004211 108..317 100 <- Minus
arm_3R 11004761..11004846 22..107 100   Minus

BS15616.3prime Sequence

560 bp (560 high quality bases) assembled on 2006-12-21

> BS15616.3prime
TCCCTTAAAGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTTAGCATTGT
CTTTGATATCCTTACCCTTGTTGAGCTCAGCCAGCAGCTTGTCCTCTGGC
TCGTACTCCAGGGGCACCTCCGAGTTGGGCGTGAGTGGCTTGTCCCTCAA
GTAGAGACCATAGCGAGATGGGTACCTGCGCTCGATCTCCTGCATGCGCT
TCAGATGATCATTCCAGGCCTTCTCTGCGTCGTAGTTAGCTGGAATTGTT
CGGCTGTAGTGATGATCGTAGATGGCACGGGGCGAGTAGCCGTAGGTGTC
GCGGCTCACTGGCAGATATCTGTAGCCAGAGGACTGGACGCGCTCATTGG
CGGTGGCGGGCTCGTCATAGATGCTCCTGTAGGAGGGCGAGTCCAGGTAG
GAGCTGTAGGGACGAGAGGCACGGGGCGCCTCGTGGGCACGGATATCCTC
GGAGCCCTTCAGGGACCTGATGTAGGACTGCCAGAATTTCGCCTTCTTGC
TGGGGCTCTCATTGCGCCCAATCATTTCCAAGTGGTTTTTGAACATGTCG
ACTGATAACT

BS15616.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6803-PC 507 Zeelin1-RC 1..499 546..48 2445 99.5 Minus
CG6803-PD 939 Zeelin1-RD 1..481 546..66 2355 99.5 Minus
CG6803-PE 501 Zeelin1-RE 1..481 546..66 2355 99.5 Minus
CG6803-PB 1098 Zeelin1-RB 1..481 546..66 2355 99.5 Minus
CG6803-PA 474 Zeelin1-RA 1..301 546..246 1505 100 Minus
CG6803-PA 474 Zeelin1-RA 302..460 224..66 745 98.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..613 546..48 2465 99.6 Minus
Mf-RC 824 CG6803-RC 115..613 546..48 2465 99.6 Minus
Mf-RM 1939 CG553-RM 115..595 546..66 2375 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 20:58:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 246..456 1055 100 Plus
3R 32079331 3R 15176166..15176295 48..177 620 98.5 Plus
3R 32079331 3R 15179038..15179129 455..546 460 100 Plus
3R 32079331 3R 15176362..15176437 174..249 365 98.7 Plus
Blast to na_te.dros performed on 2015-02-10 20:58:36 has no hits.

BS15616.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:55 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 41..546 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:14 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 41..546 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 16:38:46 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..622 40..556 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:29:05 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 105..622 40..556 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:29:05 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15178280..15178489 246..455 100 <- Plus
3R 15179039..15179139 456..556 96   Plus
3R 15176158..15176293 41..175 96 <- Plus
3R 15176364..15176433 176..245 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 16:38:46 Download gff for BS15616.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001880..11002015 41..175 96 <- Plus
arm_3R 11002086..11002155 176..245 100 <- Plus
arm_3R 11004002..11004211 246..455 100 <- Plus
arm_3R 11004761..11004861 456..556 96   Plus

BS15616.5prime Sequence

537 bp (537 high quality bases) assembled on 2006-12-21

> BS15616.5prime
GAAGTTATCACTTTACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAATTCCAGCTAACTACGACGCAGAGAAGGCCTGGA
ATGATCATCTGAAGCGCATGCAGGAGATCGAGCGCAGGTACCCATCTCGC
TATGGTCTCTACTTGAGGGACAAGCCACTCACGCCCAACTCGCTGGTGCC
CCTGGAGTACGAGCCAGAGGACAAGCTGCTGGCTGAGCTCAACAAGGGTA
AGGATATCAAAGACATTTTCTAAAAGCTTTCTAGACC

BS15616.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG6803-PC 507 Zeelin1-RC 1..507 17..523 2535 100 Plus
CG6803-PD 939 Zeelin1-RD 1..481 17..497 2405 100 Plus
CG6803-PE 501 Zeelin1-RE 1..481 17..497 2405 100 Plus
CG6803-PB 1098 Zeelin1-RB 1..481 17..497 2405 100 Plus
CG6803-PA 474 Zeelin1-RA 1..301 17..317 1505 100 Plus
CG6803-PA 474 Zeelin1-RA 302..460 339..497 795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RQ 1440 CG6803-RQ 115..622 17..524 2540 100 Plus
Mf-RC 824 CG6803-RC 115..622 17..524 2540 100 Plus
Mf-RM 1939 CG553-RM 115..595 17..497 2405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178280..15178490 317..107 1055 100 Minus
3R 32079331 3R 15176157..15176295 524..386 695 100 Minus
3R 32079331 3R 15179038..15179129 108..17 460 100 Minus
3R 32079331 3R 15176362..15176437 389..314 365 98.7 Minus
Blast to na_te.dros performed on 2015-02-10 17:18:18 has no hits.

BS15616.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:56 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 17..523 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:15 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6803-PC 1..507 17..523 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 18:34:44 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 115..622 17..524 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:30:08 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
Mf-RC 115..622 17..524 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:30:08 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15176157..15176293 388..524 100 <- Minus
3R 15176364..15176433 318..387 100 <- Minus
3R 15178280..15178489 108..317 100 <- Minus
3R 15179039..15179129 17..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 18:34:44 Download gff for BS15616.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11001879..11002015 388..524 100 <- Minus
arm_3R 11002086..11002155 318..387 100 <- Minus
arm_3R 11004002..11004211 108..317 100 <- Minus
arm_3R 11004761..11004851 17..107 100   Minus

BS15616.pep Sequence

Translation from 16 to 522

> BS15616.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
IPANYDAEKAWNDHLKRMQEIERRYPSRYGLYLRDKPLTPNSLVPLEYEP
EDKLLAELNKGKDIKDIF*

BS15616.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-PQ 168 CG6803-PQ 1..168 1..168 898 100 Plus
Mf-PC 168 CG6803-PC 1..168 1..168 898 100 Plus
Mf-PI 230 CG6803-PI 1..162 1..162 858 98.8 Plus
Mf-PH 236 CG6803-PH 1..162 1..162 858 98.8 Plus
Mf-PE 166 CG6803-PE 1..160 1..160 856 100 Plus