Clone Sequence Records
BS15617.complete Sequence
2492 bp assembled on 2009-12-07
GenBank Submission: KX800209
> BS15617.complete
GAAGTTATCAGTCGACATGACGAAGAGCAATGGCGATGTGGAGGCGGCAG
CCCAGGTGCAATCTCTGGGCGGAAAGCCCAGCAACGGACATGGCCAGCTG
AATGGGAATGGCTATCATCAGAACGGCGGACGCAGGGATTCCAGTCAAGC
CTTCACACCACTGCTGTCGCAGCACAATAATGGCACCACCAATGGCGAGG
TGACCACTCCGCCTCCGAGTACAGTGCTCTACGAGAGCACCCCGAGCAAT
AATAACGAGTGGAAGGCCCCGGAGGATCTGGGACACCTGAAGAATGGCCT
GGGCAACATACTGAGCAGTAATAATAATGGCACCGGCAATGGGCACAGTC
TGAGCGAAAAGTATGCCCATGAACAGGCTCCCCTGACCGGAGGTTACAAG
TTGCCACCTCGCTCCAGTGAGTCCGAGGAATCCGATTTCGATTCCGACCT
CAATGGCGGCTCCTCCGCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCT
GTCGGCCCAGGTGGGCCAGAAGATTCGCGTCCACGCACGTCTTCATGGTG
GTCTTCCTGCTGGCCTACATCCTGCAGGGCATGTACATGACCTACTTCGT
CTCTGTGATCACCACCATTGAGAAGCTATTCCAGATCAAGTCGAAGACCA
CGGGAATTCTGCTGAGCGCCAGTGAGATGGGTCAGATATGCACGGCCATG
TTGCTGACCTACTTCGCCGGCAGAGGACATCGTCCGAGATGGATTGCCTG
CGGCATGGTCCTGTTCTCAATCGCCGCCTTCTCCTGCGCCCTGCCGCATT
TCATCTTCGGCGAGCAGCTGATGCACTCCAGTGTAATTCTGCAGCAGACG
CAGGTCTCCCCCCCCAATAATTCCTTCTCATCACACTGGCTGAATGCCAG
CAGTGAACAGGTTAATCCCAATTTGTGCATTTTGGGTGGCAACCAAACCC
ATTCGGGCAGCGAGTGCAACGAGGAGCGCCAGCTGGAACAGGCCTCCCAC
TCTAAGATCACCGTCATCGTGCTGTGCATCTTCTTTGGCAGCCTGCTCAG
CTCGGGCATTGGCCAGACCGCCGTGGCCACACTGGGCATACCCTACATCG
ATGACAATGTAGGCAGCAAGCAGTCGCCCATGTACATGGCCGTCACCATT
GGCATGAGGATCCTGGGACCGGCATCCGGTTTCATTTTTGGCAGCTTCTG
CACTCGCTGGTATGTCAACTTCTCGAATCCCGGCTTCGACGCCACGGATC
CGCGCTGGATTGGCGCCTGGTGGCTGGGGCCTGTGGCCATTGGCAGCCTC
ATGCTGCTGGCCTCCATCGCCATGTTCTCGTTTCCCAAGCAGTTGAGAGG
CAAGCAGAAGCCGCCGGGGCAGACAGCAACTCCAGCAGCTCCAGTTGAGC
CGGAGGAGAAGCCCAAGCTAAAAGATTTTCCCAAGACAGTCCGTCGCCAG
CTGAGCAACGACATCCTGATGTTCCGCACCGCCTCGTGCGTGTTCCACCT
GCTGCCCATCGCCGGTCTCTATACGTTCCTGCCCAAGTATCTGGAGACGC
AGTTCCGGCTGGCCACCTATGATGCCAACATGATCGCCGCCTTCTGTGGC
ATCCTGGTCATGGGCATAGGTATTGTCATTTCCGGGCTCTTCATCCTGAA
GCGAAAGCCCACTGCCAGGGGCGTGGCCGCCTGGATCGCCTTTACAGCCC
TCGTCTACTCGGCGGGCATGATCATCCTGATGTTCATCGGCTGCAGCATG
AACGACTTTGCCGGCTACAAGCCAAGCGATGGCAACAGTCCCGCCTTGAT
CGAGCCCACGTGCAGTGCCGCTCTCAACTGTACCTGTGATAAGGAGAACT
TCGCGCCCATCTGCGCCGACGGCAAAATGTACATCTCGGCCTGCCACGCC
GGATGCAGCAGCTCCTCACTGCGGCCCAGCGACAATCGCACACTCTACTC
CGATTGTGCTTGCATTCCAGATGCTCCGGAGGCGGTCAACGGTTACTGTG
ATAATAACTGCAAGAACTTCATCTACTTTATACTGATCTTTGCCATTTGC
GTATTTATGCATTCCACCTCCGAGGTGGGCAGCATGCTGCTCGTCATGCG
CTGCACACACCCCAAAGATAAGGCCATGGCCATGGGTGTGATACAGTCGG
CCATCGGCCTGTTCGGCAACGTTCCCTGTCCCATCATCTACGGCGCAGTG
GTGGACTCCGCCTGCCTCATCTGGAAGTCGGTGTGCGGCAAGCACGGCGC
CTGTTCACTCTACGATGCGGACACTTTCCGGCAATATTTCCTAGGAATCA
CGGCTGGCATTATGTTCCTGGCATTCCTGATGGATCTGGTGGTGTGGCGC
AAGGCGCATCGCATTGACATCGCGCCCGAGGATCCGCAGGAGGGCGGGCC
CGCTTCCAACGGAAGGACCTTGGAGGTGTCCGAGTCCAAGCAGCCCATCA
CCCCGGCGCCGGACACGACGGTCTAGAAGCTTTCTAGACCAT
BS15617.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:21:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 2460 | CG7571-PE | 1..2460 | 17..2476 | 12300 | 100 | Plus |
| Oatp74D-RD | 2460 | CG7571-PD | 1..2460 | 17..2476 | 12300 | 100 | Plus |
| Oatp74D-RC | 2460 | CG7571-PC | 1..2460 | 17..2476 | 12300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:21:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..3465 | 17..2476 | 12300 | 100 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..3060 | 17..2476 | 12300 | 100 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..3117 | 17..2476 | 12300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:21:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17509304 | 17..1424 | 7040 | 100 | Plus |
| 3L | 28110227 | 3L | 17509444..17509809 | 1423..1788 | 1830 | 100 | Plus |
| 3L | 28110227 | 3L | 17510142..17510328 | 1787..1973 | 935 | 100 | Plus |
| 3L | 28110227 | 3L | 17510907..17511095 | 2288..2476 | 930 | 99.5 | Plus |
| 3L | 28110227 | 3L | 17510597..17510776 | 2116..2295 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 17510390..17510538 | 1973..2121 | 730 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:21:37 has no hits.
BS15617.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:48:50 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 626..3085 | 17..2476 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:19 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 647..3106 | 17..2476 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:19:39 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 626..3085 | 17..2476 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:09:47 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 658..3117 | 17..2476 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:09:47 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17510144..17510328 | 1789..1973 | 100 | -> | Plus |
| 3L | 17510391..17510534 | 1974..2117 | 100 | -> | Plus |
| 3L | 17510599..17510775 | 2118..2294 | 100 | -> | Plus |
| 3L | 17507897..17509304 | 17..1424 | 100 | -> | Plus |
| 3L | 17509446..17509809 | 1425..1788 | 100 | -> | Plus |
| 3L | 17510914..17511095 | 2295..2476 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:19 Download gff for
BS15617.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17504014..17504195 | 2295..2476 | 100 | | Plus |
| arm_3L | 17500997..17502404 | 17..1424 | 100 | -> | Plus |
| arm_3L | 17502546..17502909 | 1425..1788 | 100 | -> | Plus |
| arm_3L | 17503244..17503428 | 1789..1973 | 100 | -> | Plus |
| arm_3L | 17503491..17503634 | 1974..2117 | 100 | -> | Plus |
| arm_3L | 17503699..17503875 | 2118..2294 | 100 | -> | Plus |
BS15617.3prime Sequence
850 bp (762 high quality bases) assembled on 2006-12-21
> BS15617.3prime
ATGGTCTAGAAAGCTTCTACCCTTTCGTGTCCGGCGCCGGGGTGATGGGC
TGCTTGGACTCGGACACCTCCAAGGTCCTTCCGTTGGAAGCGGGCCCGCC
CTCCTGCGGATCCTCGGGCGCGATGTCAATGCGATGCGCCTTGCGCCACA
CCACCAGATCCATCAGGAATGCCAGGAACATAATGCCAGCCGTGATTCCT
AGGAAATATTGCCGGAAAGTGTCCGCATCGTAGAGTGAACAGGCGCCGTG
CTTGCCGCACACCGACTTCCAGATGAGGCAGGCGGAGTCCACCACTGCGC
CGTAGATGATGGGACAGGGAACGTTGCCGAACAGGCCGATGGCCGACTGT
ATCACACCCATGGCCATGGCCTTATCTTTGGGGTGTGTGCAGCGCATGAC
GAGCAGCATGCTGCCCACCTCGGAGGTGGAATGCATAAATACGCAAATGG
CAAAGATCAGTATAAAGTAGATGAAGTTCTTGCAGTTATTATCACAGTAA
CCGTTGACCGCCTCCGGAGCATCTGGAATGCAAGCACAATCGGAGTAGAG
TGTGCGATTGTCGCTGGGCCGCAGTGAGGAGCTGCTGCATCCGGCGTGGC
AGGCCGAGATGTACATTTTGCCGTCGGCGCAGATGGGCGCGAAGTTCTCC
TTATCACAGGTACAGTTGAGAGCGGCACTGCACGTGGGCTCGATCAAGGC
GGGACTGTTGCCATCGCTTGGCTTGTAGCCGGCAAAGTCGTTCATGCTGC
AGCCGATGAACATCAGGATGATCATGCCCGCCGAGTAGACGAGGGCTGTA
AAGGCGATCCAGGCGGCCACGCCCCTGGCAGTGGGCTTTCGCTTCANGAT
BS15617.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7571-PA | 2460 | Oatp74D-RA | 1627..2452 | 850..25 | 4111 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 2632..3457 | 850..25 | 4119 | 99.9 | Minus |
| Oatp74D-RD | 3658 | CG7571-RD | 2227..3052 | 850..25 | 4119 | 99.9 | Minus |
| Oatp74D-RC | 3715 | CG7571-RC | 2284..3109 | 850..25 | 4119 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:29:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17510142..17510328 | 706..520 | 935 | 100 | Minus |
| 3L | 28110227 | 3L | 17510597..17510776 | 377..198 | 900 | 100 | Minus |
| 3L | 28110227 | 3L | 17510907..17511087 | 205..25 | 890 | 99.4 | Minus |
| 3L | 28110227 | 3L | 17510390..17510538 | 520..372 | 730 | 99.3 | Minus |
| 3L | 28110227 | 3L | 17509664..17509809 | 850..705 | 719 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:29:46 has no hits.
BS15617.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:57 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7571-PA | 1627..2460 | 17..850 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:16 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7571-PA | 1627..2460 | 17..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 18:35:40 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 2273..3101 | 21..850 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:31:53 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 2284..3112 | 21..850 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:31:53 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17510391..17510534 | 376..519 | 100 | -> | Minus |
| 3L | 17510599..17510775 | 199..375 | 100 | -> | Minus |
| 3L | 17510914..17511090 | 21..198 | 98 | | Minus |
| 3L | 17509664..17509809 | 705..850 | 99 | -> | Minus |
| 3L | 17510144..17510328 | 520..704 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 18:35:40 Download gff for
BS15617.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17502764..17502909 | 705..850 | 99 | -> | Minus |
| arm_3L | 17503491..17503634 | 376..519 | 100 | -> | Minus |
| arm_3L | 17503244..17503428 | 520..704 | 100 | -> | Minus |
| arm_3L | 17503699..17503875 | 199..375 | 100 | -> | Minus |
| arm_3L | 17504014..17504190 | 21..198 | 98 | | Minus |
BS15617.5prime Sequence
849 bp (844 high quality bases) assembled on 2006-12-21
> BS15617.5prime
GAAGTTATCCTTTGACATGACGAAGAGCAATGGCGATGTGGAGGCGGCAG
CCCAGGTGCAATCTCTGGGCGGAAAGCCCAGCAACGGACATGGCCAGCTG
AATGGGAATGGCTATCATCAGAACGGCGGACGCAGGGATTCCAGTCAAGC
CTTCACACCACTGCTGTCGCAGCACAATAATGGCACCACCAATGGCGAGG
TGACCACTCCGCCTCCGAGTACAGTGCTCTACGAGAGCACCCCGAGCAAT
AATAACGAGTGGAAGGCCCCGGAGGATCTGGGACACCTGAAGAATGGCCT
GGGCAACATACTGAGCAGTAATAATAATGGCACCGGCAATGGGCACAGTC
TGAGCGAAAAGTATGCCCATGAACAGGCTCCCCTGACCGGAGGTTACAAG
TTGCCACCTCGCTCCAGTGAGTCCGAGGAATCCGATTTCGATTCCGACCT
CAATGGCGGCTCCTCCGCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCT
GTCGGCCCAGGTGGGCCAGAAGATTCGCGTCCACGCACGTCTTCATGGTG
GTCTTCCTGCTGGCCTACATCCTGCAGGGCATGTACATGACCTACTTCGT
CTCTGTGATCACCACCATTGAGAAGCTATTCCAGATCAAGTCGAAGACCA
CGGGAATTCTGCTGAGCGCCAGTGAGATGGGTCAGATATGCACGGCCATG
TTGCTGACCTACTTCGCCGGCAGAGGACATCGTCCGAGATGGATTGCCTG
CGGCATGGTCCTGTTCTCAATCGCCGCCTTCTCCTGCGCCCTGCCGCATT
TCATCTTCGGCGAGCAGCTGATGCACTCCAGTGTAATTCTGCAGCAGAC
BS15617.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7571-PA | 2460 | Oatp74D-RA | 1..833 | 17..849 | 4165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:45:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..1838 | 17..849 | 4165 | 100 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..1433 | 17..849 | 4165 | 100 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..1490 | 17..849 | 4165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17508729 | 17..849 | 4165 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:45:07 has no hits.
BS15617.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:31:58 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7571-PA | 1..833 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:18 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7571-PA | 1..833 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:47:22 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 647..1479 | 17..849 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:29:57 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 658..1490 | 17..849 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:29:57 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17507897..17508729 | 17..849 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:47:22 Download gff for
BS15617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17500997..17501829 | 17..849 | 100 | | Plus |
BS15617.pep Sequence
Translation from 16 to 2475
> BS15617.pep
MTKSNGDVEAAAQVQSLGGKPSNGHGQLNGNGYHQNGGRRDSSQAFTPLL
SQHNNGTTNGEVTTPPPSTVLYESTPSNNNEWKAPEDLGHLKNGLGNILS
SNNNGTGNGHSLSEKYAHEQAPLTGGYKLPPRSSESEESDFDSDLNGGSS
AESSSSCGLFGCRPRWARRFASTHVFMVVFLLAYILQGMYMTYFVSVITT
IEKLFQIKSKTTGILLSASEMGQICTAMLLTYFAGRGHRPRWIACGMVLF
SIAAFSCALPHFIFGEQLMHSSVILQQTQVSPPNNSFSSHWLNASSEQVN
PNLCILGGNQTHSGSECNEERQLEQASHSKITVIVLCIFFGSLLSSGIGQ
TAVATLGIPYIDDNVGSKQSPMYMAVTIGMRILGPASGFIFGSFCTRWYV
NFSNPGFDATDPRWIGAWWLGPVAIGSLMLLASIAMFSFPKQLRGKQKPP
GQTATPAAPVEPEEKPKLKDFPKTVRRQLSNDILMFRTASCVFHLLPIAG
LYTFLPKYLETQFRLATYDANMIAAFCGILVMGIGIVISGLFILKRKPTA
RGVAAWIAFTALVYSAGMIILMFIGCSMNDFAGYKPSDGNSPALIEPTCS
AALNCTCDKENFAPICADGKMYISACHAGCSSSSLRPSDNRTLYSDCACI
PDAPEAVNGYCDNNCKNFIYFILIFAICVFMHSTSEVGSMLLVMRCTHPK
DKAMAMGVIQSAIGLFGNVPCPIIYGAVVDSACLIWKSVCGKHGACSLYD
ADTFRQYFLGITAGIMFLAFLMDLVVWRKAHRIDIAPEDPQEGGPASNGR
TLEVSESKQPITPAPDTTV*
BS15617.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-PE | 819 | CG7571-PE | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PD | 819 | CG7571-PD | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PC | 819 | CG7571-PC | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp74D-PA | 819 | CG7571-PA | 1..819 | 1..819 | 4349 | 100 | Plus |
| Oatp58Da-PA | 684 | CG30277-PA | 26..674 | 134..804 | 861 | 31.8 | Plus |
