Clone Sequence Records
BS15627.complete Sequence
4325 bp assembled on 2009-12-07
GenBank Submission: KX802525
> BS15627.complete
GAAGTTATCAGTCCACATGCGGCTGACCAACGAGAAAGCAACAATGCAGC
CCCAGCTGAGTGATTTGGCCCTGGTCCTGGGCCTGTTGATCTGCTGTCTT
CCAACTTTGACGTGGGCTGCGACTCTCTCCGACAAGCGACTGTGCGCCGA
CCCGAAATGTGAACAAATCATTTCGATGGGCATTGCCAAAATCACCTACG
CCATTGGTGGTGAGGGGCTGATATCCTTCAAAATCAACTCCCCCATCCGC
GTCCTGTCCAAGAGCGCCGGTTCCAATATGCAACTGTGGGGTGTGGACAT
CAATGGGCGGCGCGGCTATGCCAATAAGGACTTTATCATGGAAAAGAAGA
TCCTCGTCCGGGATAAGGATCTATTGTACGAGGTGCCAGTGGTGGGACCT
GGTAGTCCAGTGCAGTCAGTGGAGACACCAGTTCAGAGCGTCGAGACGAC
AGTGCAGCCTGTTCTTAACGCCTCTGAGTCAACCGATGATCTGGCAACGA
CTACAACGTCACCACTTGAGATAGCCGTTGATTCAATAGTGGTTGAGCAC
GACAAGCTGCAGGATCAGCAGGTTCCTGATCCTACTGCGGCTTCCAAGGC
CCAAGTGCAGGTTATAGAAGGAACTGAGCTTCCCCTGGAGGCCATTGCAG
CTACAACGGAAGGTAGCATTGTTCCAGAGACGGCAGCAGACCCCCAAGAA
GCAACAAATCTCGACTCGACAGTTGTTGATACGAAAGAGCCACAGGCATT
AAATTCGGAGGCCATTAAATTGCAGGAAGAGCCAAAAGCACAGCAACCTG
CCACAGAAGCTGAGAAACCTCCCCCACTGCCCCAGGCTATCAACGCTGAA
CTGGAAGACGCTGACGATTTCGATTACGGGGATGACGAGACAGATGACGA
CTCCCAACAAGGTAGTCAAGATAACGAATCGATCGTAGAGATAGCAAACG
ATAACAAATCAATTAACGAATCGATTGAACTGAAACCACTTTCGGTCGCG
CAACTGAAGAAAACAGATAAAGTGGAGGATTCAAAGGATGAGACTAAAGA
AAAGCATGCAGAAATGGAAGTCTCCAAGCAGGAAGATTCTTCCTTACCCA
CTGAGACCTTAAATGTGACGGCACTCGAAGAGCAAATTGATCAGAAGGAA
TTTCCGAAGCAGGTACTGGATGCAGCCGTGGAATTAAAGTCGTCAGATCC
TCTGCCAGTTGAGGAGGTCACCGAAACTGTGGCTGAGCCACCACGAACGA
TTGTCGAAGATAAAATTAATGAAGAAATAGTTCCGGTTTCAGCTAAAATC
CAAGCAAAGCCTGCAACAGTTAACCCTACCGAACCTATTGTTGCTCAATC
TGATGCGGAAATAAAAGCGCCATCTGAGTCAGTAATCAGTTCAACCACTC
CCGCTCCTGTCGTTGAAGAGGCACCACAGAAAGCAGATCCTGTTGGTCTG
CCGCCCCTCTTTGAAAAGAAGAACTTTGAGAATCCCAATAATTATTACAA
GCAATTGCAGGAGGAACAGGAAAAACAGAGACTAGTTGCAGAGGCGGAGG
AGCAAAAGCGTTTACAAGAGGAAGCGGATCAGCAGAAGAGGTTGCAAGAG
GAAGCTGCGCTGAATAAAAGGTTACTCGAAGAAGCCGAGCAACAGAAAAG
GTTACAAGAGGAAGCGGAGCAGCAGAAGAGATTGCAAGAGGAAGCTGAGC
TGAATAAAAGGTTACTCGAAGAAGCCGAGAAACAGAAAAGGTTACACGAA
GAATCAGAGCAGCTGCAGCGCTCAAGTGAGGAAGCGGAGCCACAACTGAG
CGTTCAGGAAGCCAACATGCAGCAGCTTAATGACTCTGTGGATTCGCAGT
CCAACGAAATCGTTGATAACAACAATAGGCAGCAGCCAGAGCAATATCAG
CAGCACCATCATCATACAGAAAGTGCCTTTAATCATCCATCGACTGCATC
ACATACAACTCCAACGCCTGACGCCGAATCACCGTACGCAGCAGTCCAGG
AGGAGACCACAGAAGCATCCCAAACGGATAACCATCGTGAGGGAGTTGGT
TACGTGGAGCCTGTAGCTCTGCCAGCGACGGCTAGCCCCGTGTCGGAAGT
ACCTATCAAGGAGGACGCCGCAGGCTTTGGTCTCTTTGCCACAATTGTCG
ACACCGTAAACAATTTTATCGGAAAGGATCCTCAGAGTGATCCAGCAGAT
AGCAGCGATGAATTGCATAGAATCCTCTATCCAGGAAGGCCTGAAGTGCC
ACCTTCTCAAAGGAAGGCGGAAGACTTTGCTCCTGCCGATGTGGATGGAT
ATTGTGCCCGGTTTCAAGCCAAAGATGAGCACTGTCATCGCTCTATATCT
CTTGATAATTTTGTTGAAGTAATGGCCGACAAGCTGGTTGACCACAGCCA
ACTTTTACTTTGCGTGGTTATCGCCGCGATTTCTTCCTTGTTCTTCATGT
TTGCATACTACTGCTTCTGCAATAGTAGTCAGGAGGGAGCGCTTCTTTCG
AAGCTGAACCATTTGGAGCGCAGTCTGTTGGCCTCCCACAAGGAGAACCT
GATCATCAAACACGACCTGATGACTACGCGAACAAAGTTGGCCAGCATTG
AGGACAATTCCTTCGGCTCAAACGACATGGTGGCCGATCTCAAGAAGCAA
CTTGAATCTGAGCTGTACGAGAAGGCTAAGCTGCAGGAACAGGTTGGCTC
ATTAGAAAGGGATCTGGATAACGCGGCTGAGGCTGGCCTGGAGCTCAACA
AGATGCTGTCCGAAGTCCTTAACGGTCAGAATGGCGATGAGGCTTTCATG
AGCACCGTCGACGAACTGCAGCGACAGCTTAATGACCAAGAAAAGATCAT
CATCGAAATCAACAACAGTCTGGCCGAGAAAAGTAGGGAGAACAGCGAAC
TGCAGTATACGTTTACGGAGGCCACGACTCGGCTCAACAGCGAGCTGAAG
ACGCTACAAGAGGACAACTACGAGTTGGAGATGGAGAAGTCTAAGCTGCA
AACTCGTCTTCAGGAAATTCAGGCTGAAACGGAATCGGAATTGGCCAAGG
CACTGGAAGCCAGAAATTACGAAATGCAAAAGCTGCAGAATCAGATTGTT
GAGCTGACTGTCAAGTGGGAGCGCGAACATGGCGATCTGCAGACCAGTCT
AGCAAAGATCGAAGCTCTCGAAGATTGCCTGAAGGCAGTCGGAAAGGATG
CGATCCACAATGTCCAAGAGCTGATTACCTCGGCCAAGACACGCGGTGAA
CTCAACGCGGTCCATAAGAAGCTGGTCGAGTTGCAGTCGAAGGTGGAGCA
AGAAGAGGCCCACAAGCAACGTCTGGAGAGTCAGCTGCAGCAGTCAAGTC
AAGATGTGGAGCAGCTGAAGCAGGACTTCAACCAATCAGAGCGCGATAAG
CTAGAAGCCCAGACGCGTCTTGAAGTCTTATCCGGCTACTTCAGGGAGAA
GGAGAACGATCTTAAGAAAGAACTTAGTCTGCAGGAGACCAAGTGGCTGC
AGCACCAGGGAGAGAATGCCAGCACAGTTGAGACCCAGACGCTGATGAAG
AACGAAATCCAAACTCTGAAATCTCAGAATGACGAGCTGCGTGCCGAGAT
CGAGGCCCAGATAGCCTCGCACAAAGCTCAGATGGGCACGCTGGAGAACC
GAGCTCATGAGTCCTGGCTGGCAGCGCGCCAGTCGGAGCGCCGTTGCGAA
GAAGCGTTGGCCGAAGCTGCCAGCCTGAGGCGTAAGCTGACCACAATGGC
CAGCGGCGGAGGAGGAGTAGGCGGAGATCCAGGCGTAATGGAGGCCATCG
CCGCCAACGGAACTTCCGTGCTGGGGGCGGAACTGAAAACGGCTCCATCG
CCGCTTCCCTTGCCGGGTTCACCACTGCTGAACATGCCAAATCCACTGCC
ATTCCTGGCGGCACCCTTCTCACCGTTCATGGGTCTGCCGCCGCCATTCC
TGCCTCCAACTGGAGCGGGAGGGGCACGTCCTCCGCCCCTGGGACGCATG
CGCTCTCCGCCGCCCTCGAGTCGCGGCGATCGGGATCGAGAGCGTTACTC
AGACTACAGCGACTACGATGACTACGACGACGATGAGGAGGACGACCGGG
GCATGGACCGTCGTCGACGGCACAGCGGCAGCTGGGGTCGCCGGCATCGC
GGCTCCTACAGCCACTCGCCGCGCACATATCGCTCGCTATCACCGTCGGA
CAGTCGGTACAACTACAATGACACGGAGACTGACTTCAGTCCGCCCCCAA
GTCCGCCGCCCGTTCCGTCGGGACGCAGCGCGACATCGCGACCCTACAGC
GAGGTATGAAAGCTTTCTAGACCAT
BS15627.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango1-RC | 4293 | CG11098-PC | 1..4293 | 17..4309 | 21465 | 100 | Plus |
| Tango1-RA | 4293 | CG11098-PA | 1..4293 | 17..4309 | 21465 | 100 | Plus |
| Tango1-RD | 4275 | CG11098-PD | 1..4275 | 17..4309 | 21160 | 99.6 | Plus |
| Tango1-RC | 4293 | CG11098-PC | 1546..1657 | 1652..1763 | 440 | 92.9 | Plus |
| Tango1-RC | 4293 | CG11098-PC | 1636..1747 | 1562..1673 | 440 | 92.9 | Plus |
| Tango1-RA | 4293 | CG11098-PA | 1546..1657 | 1652..1763 | 440 | 92.9 | Plus |
| Tango1-RA | 4293 | CG11098-PA | 1636..1747 | 1562..1673 | 440 | 92.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango1-RC | 4521 | CG11098-RC | 146..4438 | 17..4309 | 21465 | 100 | Plus |
| Tango1-RA | 4679 | CG11098-RA | 146..4438 | 17..4309 | 21465 | 100 | Plus |
| Tango1-RD | 4661 | CG11098-RD | 146..4420 | 17..4309 | 21160 | 99.6 | Plus |
| Tango1-RC | 4521 | CG11098-RC | 1691..1802 | 1652..1763 | 440 | 92.9 | Plus |
| Tango1-RC | 4521 | CG11098-RC | 1781..1892 | 1562..1673 | 440 | 92.9 | Plus |
| Tango1-RA | 4679 | CG11098-RA | 1691..1802 | 1652..1763 | 440 | 92.9 | Plus |
| Tango1-RA | 4679 | CG11098-RA | 1781..1892 | 1562..1673 | 440 | 92.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6649787..6651895 | 165..2273 | 10545 | 100 | Plus |
| 2L | 23513712 | 2L | 6653595..6654333 | 3571..4309 | 3695 | 100 | Plus |
| 2L | 23513712 | 2L | 6652753..6653377 | 2844..3468 | 3125 | 100 | Plus |
| 2L | 23513712 | 2L | 6652006..6652445 | 2272..2711 | 2200 | 100 | Plus |
| 2L | 23513712 | 2L | 6649533..6649680 | 17..164 | 740 | 100 | Plus |
| 2L | 23513712 | 2L | 6652496..6652629 | 2710..2843 | 670 | 100 | Plus |
| 2L | 23513712 | 2L | 6653435..6653536 | 3469..3570 | 510 | 100 | Plus |
| 2L | 23513712 | 2L | 6651184..6651295 | 1652..1763 | 440 | 92.9 | Plus |
| 2L | 23513712 | 2L | 6651274..6651385 | 1562..1673 | 440 | 92.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:07:03 has no hits.
BS15627.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:45:48 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 104..4395 | 17..4308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:06:20 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 146..4437 | 17..4308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 10:57:43 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 104..4395 | 17..4308 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:21 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 146..4437 | 17..4308 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:21 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6653435..6653536 | 3469..3570 | 100 | -> | Plus |
| 2L | 6649533..6649680 | 17..164 | 100 | -> | Plus |
| 2L | 6649787..6651895 | 165..2273 | 100 | -> | Plus |
| 2L | 6652008..6652444 | 2274..2710 | 100 | -> | Plus |
| 2L | 6652497..6652629 | 2711..2843 | 100 | -> | Plus |
| 2L | 6652753..6653377 | 2844..3468 | 100 | -> | Plus |
| 2L | 6653595..6654332 | 3571..4308 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:06:20 Download gff for
BS15627.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6653435..6653536 | 3469..3570 | 100 | -> | Plus |
| arm_2L | 6649533..6649680 | 17..164 | 100 | -> | Plus |
| arm_2L | 6649787..6651895 | 165..2273 | 100 | -> | Plus |
| arm_2L | 6652008..6652444 | 2274..2710 | 100 | -> | Plus |
| arm_2L | 6652497..6652629 | 2711..2843 | 100 | -> | Plus |
| arm_2L | 6652753..6653377 | 2844..3468 | 100 | -> | Plus |
| arm_2L | 6653595..6654332 | 3571..4308 | 100 | | Plus |
BS15627.3prime Sequence
917 bp (850 high quality bases) assembled on 2006-12-21
> BS15627.3prime
ATGGTCTAGAAAGCTTTCATCCTTCGCTGTAGGGTCGCGATGTCGCGCTG
CGTCCCGACGGAACGGGCGGCGGACTTGGGGGCGGACTGAAGTCAGTCTC
CGTGTCATTGTAGTTGTACCGACTGTCCGACGGTGATAGCGAGCGATATG
TGCGCGGCGAGTGGCTGTAGGAGCCGCGATGCCGGCGACCCCAGCTGCCG
CTGTGCCGTCGACGACGGTCCATGCCCCGGTCGTCCTCCTCATCGTCGTC
GTAGTCATCGTAGTCGCTGTAGTCTGAGTAACGCTCTCGATCCCGATCGC
CGCGACTCGAGGGCGGCGGAGAGCGCATGCGTCCCAGGGGCGGAGGACGT
GCCCCTCCCGCTCCAGTTGGAGGCAGGAATGGCGGCGGCAGACCCATGAA
CGGTGAGAAGGGTGCCGCCAGGAATGGCAGTGGATTTGGCATGTTCAGCA
GTGGTGAACCCGGCAAGGGAAGCGGCGATGGAGCCGTTTTCAGTTCCGCC
CCCAGCACGGAAGTTCCGTTGGCGGCGATGGCCTCCATTACGCCTGGATC
TCCGCCTACTCCTCCTCCGCCGCTGGCCATTGTGGTCAGCTTACGCCTCA
GGCTGGCAGCTTCGGCCAACGCTTCTTCGCAACGGCGCTCCGACTGGCGC
GCTGCCAGCCAGGACTCATGAGCTCGGTTCTCCAGCGTGCCCATCTGAGC
TTTGTGCGAGGCTATCTGGGCCTCGATCTCGGCACGCAGCTCGTCATTCT
GAGATTTCAGAGTTTGGATTTCGTTCTTCATCAGCGTCTGGGTCTCAACT
GTGCTGGCATTCTCTCCCTGGTGCTGCAGCCACTTGGTCTCCTGCAGACT
AAGTTCTTTCTTAAGATCGTTCTCCTTTCTCCTGAAGTACCCGGATAAGA
CTTCAAGACGCGTCTGG
BS15627.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11098-PA | 4293 | CG11098-RA | 3433..4286 | 877..24 | 4270 | 100 | Minus |
| CG11098-PB | 3774 | CG11098-RB | 2914..3767 | 877..24 | 4270 | 100 | Minus |
| CG11098-PA | 4293 | CG11098-RA | 3393..3429 | 917..881 | 160 | 97.2 | Minus |
| CG11098-PB | 3774 | CG11098-RB | 2874..2910 | 917..881 | 160 | 97.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:37:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango1-RC | 4521 | CG11098-RC | 3538..4438 | 917..17 | 4415 | 99.4 | Minus |
| Tango1-RD | 4661 | CG11098-RD | 3520..4420 | 917..17 | 4415 | 99.4 | Minus |
| Tango1-RA | 4679 | CG11098-RA | 3538..4438 | 917..17 | 4415 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:37:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6653595..6654333 | 755..17 | 3665 | 99.7 | Minus |
| 2L | 23513712 | 2L | 6653435..6653536 | 857..756 | 510 | 100 | Minus |
| 2L | 23513712 | 2L | 6653318..6653377 | 917..858 | 240 | 93.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:37:20 has no hits.
BS15627.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:17 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11098-PA | 3393..4293 | 17..917 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:40 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11098-PB | 2874..3774 | 17..917 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-19 18:36:19 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 3538..4443 | 13..917 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:34:16 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 3538..4443 | 13..917 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:34:16 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6653435..6653536 | 756..857 | 100 | -> | Minus |
| 2L | 6653318..6653377 | 858..917 | 95 | -> | Minus |
| 2L | 6653595..6654327 | 21..755 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-19 18:36:19 Download gff for
BS15627.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6653318..6653377 | 858..917 | 95 | -> | Minus |
| arm_2L | 6653435..6653536 | 756..857 | 100 | -> | Minus |
| arm_2L | 6653595..6654327 | 21..755 | 99 | -> | Minus |
BS15627.5prime Sequence
828 bp (747 high quality bases) assembled on 2006-12-21
> BS15627.5prime
GAAGTTATCCTTCGACATGCGGCTGACCAACGAGAAAGCAACAATGCAGC
CCCAGCTGAGTGATTTGGCCCTGGTCCTGGGCCTGTTGATCTGCTGTCTT
CCAACTTTGACGTGGGCTGCGACTCTCTCCGACAAGCGACTGTGCGCCGA
CCCGAAATGTGAACAAATCATTTCGATGGGCATTGCCAAAATCACCTACG
CCATTGGTGGTGAGGGGCTGATATCCTTCAAAATCAACTCCCCCATCCGC
GTCCTGTCCAAGAGCGCCGGTTCCAATATGCAACTGTGGGGTGTGGACAT
CAATGGGCGGCGCGGCTATGCCAATAAGGACTTTATCATGGAAAAGAAGA
TCCTCGTCCGGGATAAGGATCTATTGTACGAGGTGCCAGTGGTGGGACCT
GGTAGTCCAGTGCAGTCAGTGGAGACACCAGTTCAGAGCGTCGAGACGAC
AGTGCAGCCTGTTCTTAACGCCTCTGAGTCAACCGATGATCTGGCAACGA
CTACAACGTCACCACTTGAGATAGCCGTTGATTCAATAGTGGTTGAGCAC
GACAAGCTGCAGGATCAGCAGGTTCCTGATCCTACTGCGGCTTCCAAGGC
CCAAGTGCAGGTTATAGAAGGAACTGAGCTTCCCCTGGAGGCCATTGCAG
CTACAACGGAAGGTAGCATTGTTCCAGAGACGGCAGCAGACCCCCAAGAA
GCAACAAATCTCGACTCGACAGTTGTTGATACGAAAGAGCCACAGGCATT
AAATTCGGAGGCCATTAAATTGCAGGAAGAGCCAAAGCACAGCAACCTGC
CACAGAAGCTGAGAAACCTCCCCCACTG
BS15627.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11098-PA | 4293 | CG11098-RA | 1..770 | 17..786 | 3850 | 100 | Plus |
| CG11098-PB | 3774 | CG11098-RB | 1..770 | 17..786 | 3850 | 100 | Plus |
| CG11098-PA | 4293 | CG11098-RA | 769..813 | 784..828 | 225 | 100 | Plus |
| CG11098-PB | 3774 | CG11098-RB | 769..813 | 784..828 | 225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:45:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango1-RC | 4521 | CG11098-RC | 146..958 | 17..828 | 4040 | 99.9 | Plus |
| Tango1-RD | 4661 | CG11098-RD | 146..958 | 17..828 | 4040 | 99.9 | Plus |
| Tango1-RA | 4679 | CG11098-RA | 146..958 | 17..828 | 4040 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:45:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6649787..6650451 | 165..828 | 3275 | 99.8 | Plus |
| 2L | 23513712 | 2L | 6649533..6649680 | 17..164 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:45:49 has no hits.
BS15627.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:18 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11098-PA | 1..813 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:41 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11098-PB | 1..813 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:47:37 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 146..958 | 17..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:09 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango1-RA | 146..958 | 17..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:09 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6649533..6649680 | 17..164 | 100 | -> | Plus |
| 2L | 6649787..6650451 | 165..828 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:47:37 Download gff for
BS15627.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6649533..6649680 | 17..164 | 100 | -> | Plus |
| arm_2L | 6649787..6650451 | 165..828 | 99 | | Plus |
BS15627.pep Sequence
Translation from 16 to 4308
> BS15627.pep
MRLTNEKATMQPQLSDLALVLGLLICCLPTLTWAATLSDKRLCADPKCEQ
IISMGIAKITYAIGGEGLISFKINSPIRVLSKSAGSNMQLWGVDINGRRG
YANKDFIMEKKILVRDKDLLYEVPVVGPGSPVQSVETPVQSVETTVQPVL
NASESTDDLATTTTSPLEIAVDSIVVEHDKLQDQQVPDPTAASKAQVQVI
EGTELPLEAIAATTEGSIVPETAADPQEATNLDSTVVDTKEPQALNSEAI
KLQEEPKAQQPATEAEKPPPLPQAINAELEDADDFDYGDDETDDDSQQGS
QDNESIVEIANDNKSINESIELKPLSVAQLKKTDKVEDSKDETKEKHAEM
EVSKQEDSSLPTETLNVTALEEQIDQKEFPKQVLDAAVELKSSDPLPVEE
VTETVAEPPRTIVEDKINEEIVPVSAKIQAKPATVNPTEPIVAQSDAEIK
APSESVISSTTPAPVVEEAPQKADPVGLPPLFEKKNFENPNNYYKQLQEE
QEKQRLVAEAEEQKRLQEEADQQKRLQEEAALNKRLLEEAEQQKRLQEEA
EQQKRLQEEAELNKRLLEEAEKQKRLHEESEQLQRSSEEAEPQLSVQEAN
MQQLNDSVDSQSNEIVDNNNRQQPEQYQQHHHHTESAFNHPSTASHTTPT
PDAESPYAAVQEETTEASQTDNHREGVGYVEPVALPATASPVSEVPIKED
AAGFGLFATIVDTVNNFIGKDPQSDPADSSDELHRILYPGRPEVPPSQRK
AEDFAPADVDGYCARFQAKDEHCHRSISLDNFVEVMADKLVDHSQLLLCV
VIAAISSLFFMFAYYCFCNSSQEGALLSKLNHLERSLLASHKENLIIKHD
LMTTRTKLASIEDNSFGSNDMVADLKKQLESELYEKAKLQEQVGSLERDL
DNAAEAGLELNKMLSEVLNGQNGDEAFMSTVDELQRQLNDQEKIIIEINN
SLAEKSRENSELQYTFTEATTRLNSELKTLQEDNYELEMEKSKLQTRLQE
IQAETESELAKALEARNYEMQKLQNQIVELTVKWEREHGDLQTSLAKIEA
LEDCLKAVGKDAIHNVQELITSAKTRGELNAVHKKLVELQSKVEQEEAHK
QRLESQLQQSSQDVEQLKQDFNQSERDKLEAQTRLEVLSGYFREKENDLK
KELSLQETKWLQHQGENASTVETQTLMKNEIQTLKSQNDELRAEIEAQIA
SHKAQMGTLENRAHESWLAARQSERRCEEALAEAASLRRKLTTMASGGGG
VGGDPGVMEAIAANGTSVLGAELKTAPSPLPLPGSPLLNMPNPLPFLAAP
FSPFMGLPPPFLPPTGAGGARPPPLGRMRSPPPSSRGDRDRERYSDYSDY
DDYDDDEEDDRGMDRRRRHSGSWGRRHRGSYSHSPRTYRSLSPSDSRYNY
NDTETDFSPPPSPPPVPSGRSATSRPYSEV*
BS15627.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:36:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango1-PC | 1430 | CG11098-PC | 1..1430 | 1..1430 | 7269 | 100 | Plus |
| Tango1-PA | 1430 | CG11098-PA | 1..1430 | 1..1430 | 7269 | 100 | Plus |
| Tango1-PD | 1424 | CG11098-PD | 1..1424 | 1..1430 | 7224 | 99.6 | Plus |
| CLIP-190-PS | 1653 | CG5020-PS | 354..1403 | 130..1235 | 310 | 19.8 | Plus |
| CLIP-190-PN | 1598 | CG5020-PN | 393..1348 | 244..1235 | 307 | 20.3 | Plus |
| CLIP-190-PS | 1653 | CG5020-PS | 473..1216 | 495..1237 | 222 | 20.6 | Plus |
