Clone BS15632 Report

Search the DGRC for BS15632

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG3530-RA
Protein status:BS15632.pep: full length peptide match
Sequenced Size:2318

Clone Sequence Records

BS15632.complete Sequence

2318 bp assembled on 2009-12-07

GenBank Submission: KX801761

> BS15632.complete
GAAGTTATCAGTCGACATGGACATCACCCGATTCATGAACAAGTTCAACG
AGATCGAGCGCCAATTGTCCCCGACCTCCGCGCTGCGGCTGAGCTTCGAC
AACATCTCGCCGGAGACGGAGGAGCCGCCGGACGGCAATAAGAGGCTGTG
GGGCGTGCCAGTGCCGCCCTTCGTCTCCGAAAAGGTGGTCTCCTGGATCG
AGGAGGAGTTCAACGAGGCTCCGGTCTTCTACAACGGCAACAGTGTGCTC
AAGAAGGTGGAAAATGTGCGGATGATAGATCGCTACAATACCAAAAATCC
CACGGTTGGCACACTCTATCTAACGGCCACCCATCTGATATTCGTGGAGC
CCGACAGCAACAAGGAGACCTGGATCCTGCACATGCACGTGGCCAGCATT
GAGAAGCTTCCCTTGAGCACGACAGGATCTCCGCTACTCATCCGCTGCAA
GACCTTCCTCTCCGTAACTTTCGTCATTCCCAAGGACTCCGAGTGCCACG
ATGTCTACACTTCGCTGCTGAAACTCTTCCAGCCGGTGTCCATCAACAAA
TTGTACTGCTTCAACTACCAGCCGAACAAGGATGATTTCCCCAAGAACGC
TGGCTGGGATTACTTTAAACTGGAGGCGGAGTTCAAGCACATGCTGGTGC
CCAACGAGGCCTGGACGCTGTGCTCCATGAACGAGAAGTACGAGCTGTGC
GACACCTATCCGCGTCAGATTTACGTGCCCAAGGAGGCCACCACGCTGAT
GCTCATCAGCAGCTCGCGATTCCGCTCCAAGGGGCGGCTGCCAGTGCTCA
CCTATCTGCACAACAACAAGGCTTCCATCTGCCGCTGCAGTCAGCCCCTG
TCCGGATTCAGTGCCCGCTGTCTGGAGGATGAGCAGATGCTGGAGGCCAT
ACGCAAGACGAATTCCAACACGGACTACATGTATGTGGTGGACACGCGAC
CGCGGATTAATGCCATGGCAAACAGAGCCGCCGGCAAGGGATACGAGAAC
GAGGCCTTCTACGAGAACATCAAATTCCACTTCCTCGGCATTGAGAACAT
CCACGTCCAGCGTGCCAGTCTGCAAAAGGTGCTTGAGGCCTGCGAACAGA
AGTCGCCCACGATGAGCGCCTTCATAAATGCCCTGGAGTCATCCGGCTGG
CTGAAGCACATTCGCTCCATATTGGACACGTCGAGCTTCATCGCCAACGC
CGTGGACAAGGGCGTCTCGGTGGTGGTCCACTGCTCCGACGGCTGGGACC
GCACGGCCCAGGTCTGTTCACTGGCGCAGCTGATGCTGAACCCCTACTAC
CGAACCATCAAGGGCTTCCAGGCGCTAATCGAGAAGGACTGGCTGGCATT
CGGGCACAAGTTCAGCGAGCGCTGCGGTCACATCCAGACGGATGCCCGCG
AGGTGTCGCCGATCTTCACACAGTTCCTGGACTGTACCTGGCAGCTAATG
TCGCAGCGCAGCGAGGCCTTCGAGTTCAACGAGCGGTTCCTGCTCATCCT
GCACGACCATGTGCACTCATGTCAATTCGGCACCTTCGTGGGCAACTGCG
AGAAGGATCGCTTGGACCTAAAGCTGGCCGAGCGCACCTTCTCGCTGTGG
GGCTATATGGCCAATCACCTGAACGAGTATATCAACCCGCTGTACAAACC
AAATGTAGACGAGGCCATTAAGGCCAACCTGGCACCGCAGTGCATCAAGT
TCTGGCGCGGCATGTACAGTCGCTTCGAGAGCGGCATTCATCCGCGGGAG
CCACTGGGCGACGTGCTGCTCGATAGCAAGGAGCACTGCAACTCGCTGGA
GGACCACGTGCAGCATCTGACCAAGCGCATAGCCAGCTTCAAGAACTACA
TTTCCAAGTCGGCCAAGAAACTGCAAGACGCCACCAGCGCCCCTGGCAAA
GTGAACAAGGAGCTCTCCAGCAACGAGATCAATGACAACAAATACAACTA
CGATAAGAAGCTTAGCGAACTGTCTGCCGCCGACGACGATCATCCGCTGA
AGGCCAGCAACATGTCCTTCGCCAGTCTGTCGCTGAGCGCGGAACAATCC
AGTCCGCCGCAGGCGCTGCCCGAGGAGATCAACTCCGTGGCCGTAGACTG
GAAGCCCATGCGCAACGTAACCACCTGCTCCTGCTCCACGCCCTTCGATC
AGTTCAGCAAAAAGACTCACTGCTGGCGCTGCGGGGACATCTTCTGCGAG
CGCTGCATAGACAAGAACGTGGCTCTGCCAGGACACGACAGTGGAAAGCC
GGTGCCGGTGTGCCGGGGCTGCTTCCGGCAAATGCAAAAGCAAAGCCCGT
AGAAGCTTTCTAGACCAT

BS15632.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-RA 2286 CG3530-PA 1..2286 17..2302 11430 100 Plus
CG3530-RB 2070 CG3530-PB 22..2070 254..2302 10245 100 Plus
CG3530-RC 1920 CG3530-PC 1..1920 383..2302 9600 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-RA 3063 CG3530-RA 266..2552 17..2303 11435 100 Plus
CG3530-RB 2810 CG3530-RB 250..2299 254..2303 10250 100 Plus
CG3530-RC 3193 CG3530-RC 752..2682 373..2303 9655 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23390303..23390819 1700..1184 2585 100 Minus
2R 25286936 2R 23391389..23391674 821..536 1430 100 Minus
2R 25286936 2R 23390006..23390248 1941..1699 1215 100 Minus
2R 25286936 2R 23394915..23395156 258..17 1210 100 Minus
2R 25286936 2R 23390895..23391125 1185..955 1155 100 Minus
2R 25286936 2R 23389719..23389941 2164..1942 1115 100 Minus
2R 25286936 2R 23391741..23391904 536..373 820 100 Minus
2R 25286936 2R 23389520..23389660 2303..2163 705 100 Minus
2R 25286936 2R 23391192..23391328 955..819 685 100 Minus
2R 25286936 2R 23393364..23393482 373..255 595 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:51:56 has no hits.

BS15632.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:23 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 248..2533 17..2302 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:54 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 266..2551 17..2302 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:12:40 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 248..2533 17..2302 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:39 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 266..2551 17..2302 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:39 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23390006..23390248 1699..1941 100 <- Minus
2R 23389521..23389658 2165..2302 100 <- Minus
2R 23389719..23389941 1942..2164 100 <- Minus
2R 23390305..23390817 1186..1698 100 <- Minus
2R 23390895..23391124 956..1185 100 <- Minus
2R 23391192..23391326 821..955 100 <- Minus
2R 23391390..23391673 537..820 100 <- Minus
2R 23391741..23391903 374..536 100 <- Minus
2R 23393364..23393480 257..373 100 <- Minus
2R 23394917..23395156 17..256 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:54 Download gff for BS15632.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19277529..19277771 1699..1941 100 <- Minus
arm_2R 19277044..19277181 2165..2302 100 <- Minus
arm_2R 19277242..19277464 1942..2164 100 <- Minus
arm_2R 19277828..19278340 1186..1698 100 <- Minus
arm_2R 19278418..19278647 956..1185 100 <- Minus
arm_2R 19278715..19278849 821..955 100 <- Minus
arm_2R 19278913..19279196 537..820 100 <- Minus
arm_2R 19279264..19279426 374..536 100 <- Minus
arm_2R 19280887..19281003 257..373 100 <- Minus
arm_2R 19282440..19282679 17..256 100   Minus

BS15632.3prime Sequence

951 bp (780 high quality bases) assembled on 2006-12-21

> BS15632.3prime
ATGGTCTAGAAAGCTTCTACCGTTTTTGCTTTTGCATTTGCCGGAAGCAG
CCCCGGCACACCGGCACCGGCTTTCCACTGTCGTGTCCTGGCAGACCCAC
GTTCTTGTCTATGCAGCGCTCGCAGAAGATGTCCCCGCAGCGCCAGCAGT
GAGTCTTTTTGCTGAACTGATCGAAGGGCGTGGAGCAGGAGCAGGTGGTT
ACGTTGCGCATGGGCTTCCAGTCTACGGCCACGGAGTTGATCTCCTCGGG
CAGCGCCTGCGGCGGACTGGATTGTTCCGCGCTCAGCGACAGACTGGCGA
AGGACATGTTGCTGGCCTTCAGCGGATGATCGTCGTCGGCGGCAGACAGT
TCGCTAAGCTTCTTATCGTAGTTGTATTTGTTGTCATTGATCTCGTTGCT
GGAGAGCTCCTTGTTCACTTTGCCAGGGGCGCTGGTGGCGTCTTGCAGTT
TCTTGGCCGACTTGGAAATGTAGTTCTTGAAGCTGGCTATGCGCTTGGTC
AGATGCTGCACGTGGTCCTCCAGCGAGTTGCAGTGCTCCTTGCTATCGAG
CAGCACGTCGCCCAGTGGCTCCCGCGGATGAATGCCGCTCTCGAAGCGAC
TGTACATGCCGCGCCAGAACTTGATGCACTGCGGTGCCAGGTTGGCCTTA
ATGGCCTCGTCTACATTTGGTTTGTACAGCGGGTTGATATACTCGTTCAG
GTGATTGGCCATATAGCCCCACAGCGAGAAGGTGCGCTCGGCCAGCTTTA
GGTCCAAGCGATCCTTCTCGCAGTTGCCCACGAAGGTGCCGAATTGACAT
GAGTGCACATGGTCGTGCAGGATGAGCAGGAACCGCTCGTTGAACTCGAA
GGCCTCGCTGCGCTGCGACATTAGCTGCCAGGTACAGTCCAGGAACTGTG
TGAAGATCGGCGACACCTCGCGGGCATCCGTCTGGATGTGACCGCAGCGC
T

BS15632.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-PB 2070 CG3530-RB 1136..2062 951..25 4610 99.8 Minus
CG3530-PA 2286 CG3530-RA 1352..2278 951..25 4610 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:03:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-RC 3193 CG3530-RC 1747..2673 951..25 4620 99.9 Minus
CG3530-RA 3063 CG3530-RA 1617..2543 951..25 4620 99.9 Minus
CG3530-RB 2810 CG3530-RB 1364..2290 951..25 4620 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 00:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23390303..23390635 619..951 1665 100 Plus
2R 25286936 2R 23390006..23390248 378..620 1215 100 Plus
2R 25286936 2R 23389719..23389941 155..377 1115 100 Plus
2R 25286936 2R 23389529..23389660 25..156 645 99.2 Plus
Blast to na_te.dros performed on 2015-02-06 00:03:06 has no hits.

BS15632.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:27 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-PA 1352..2286 17..951 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:56 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-PA 1352..2286 17..951 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:34:22 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-RB 1364..2302 13..951 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:34:47 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-RB 1364..2302 13..951 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:34:47 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 23389517..23389658 13..154 96 <- Plus
2R 23389719..23389941 155..377 100 <- Plus
2R 23390006..23390248 378..620 100 <- Plus
2R 23390305..23390635 621..951 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:34:22 Download gff for BS15632.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19277040..19277181 13..154 96 <- Plus
arm_2R 19277242..19277464 155..377 100 <- Plus
arm_2R 19277529..19277771 378..620 100 <- Plus
arm_2R 19277828..19278158 621..951 100   Plus

BS15632.5prime Sequence

808 bp (779 high quality bases) assembled on 2006-12-21

> BS15632.5prime
GAAGTTATCCTTCGACATGGACATCACCCGATTCATGAACAAGTTCAACG
AGATCGAGCGCCAATTGTCCCCGACCTCCGCGCTGCGGCTGAGCTTCGAC
AACATCTCGCCGGAGACGGAGGAGCCGCCGGACGGCAATAAGAGGCTGTG
GGGCGTGCCAGTGCCGCCCTTCGTCTCCGAAAAGGTGGTCTCCTGGATCG
AGGAGGAGTTCAACGAGGCTCCGGTCTTCTACAACGGCAACAGTGTGCTC
AAGAAGGTGGAAAATGTGCGGATGATAGATCGCTACAATACCAAAAATCC
CACGGTTGGCACACTCTATCTAACGGCCACCCATCTGATATTCGTGGAGC
CCGACAGCAACAAGGAGACCTGGATCCTGCACATGCACGTGGCCAGCATT
GAGAAGCTTCCCTTGAGCACGACAGGATCTCCGCTACTCATCCGCTGCAA
GACCTTCCTCTCCGTAACTTTCGTCATTCCCAAGGACTCCGAGTGCCACG
ATGTCTACACTTCGCTGCTGAAACTCTTCCAGCCGGTGTCCATCAACAAA
TTGTACTGCTTCAACTACCAGCCGAACAAGGATGATTTCCCCAAGAACGC
TGGCTGGGATTACTTTAAACTGGAGGCGGAGTTCAAGCACATGCTGGTGC
CCAACGAGGCCTGGACGCTGTGCTCCATGAACGAGAAGTACGAGCTGTGC
GACACCTATCCGCGTCAGATTTACGTGCCCAAGGAGGCCACCACGCTGAT
GCTCATCAGCAGCTCGCGATTCCGCTCCAAGGGGCGGCTGCCAGTGCTCA
CCTATCTG

BS15632.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-PA 2286 CG3530-RA 1..792 17..808 3960 100 Plus
CG3530-PB 2070 CG3530-RB 22..576 254..808 2775 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-RA 3063 CG3530-RA 266..1057 17..808 3960 100 Plus
CG3530-RB 2810 CG3530-RB 250..804 254..808 2775 100 Plus
CG3530-RC 3193 CG3530-RC 752..1187 373..808 2180 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23391402..23391674 808..536 1365 100 Minus
2R 25286936 2R 23394915..23395156 258..17 1210 100 Minus
2R 25286936 2R 23391741..23391904 536..373 820 100 Minus
2R 25286936 2R 23393364..23393482 373..255 595 100 Minus
Blast to na_te.dros performed on 2015-02-02 13:59:40 has no hits.

BS15632.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:28 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-PA 1..792 17..808 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:10:57 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-PA 1..792 17..808 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:13:08 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 259..1057 8..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:50:31 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3530-RA 259..1057 8..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:50:31 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 23391402..23391673 537..808 100 <- Minus
2R 23391741..23391903 374..536 100 <- Minus
2R 23393364..23393480 257..373 100 <- Minus
2R 23394917..23395163 8..256 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:13:08 Download gff for BS15632.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19278925..19279196 537..808 100 <- Minus
arm_2R 19279264..19279426 374..536 100 <- Minus
arm_2R 19280887..19281003 257..373 100 <- Minus
arm_2R 19282440..19282686 8..256 98   Minus

BS15632.pep Sequence

Translation from 16 to 2301

> BS15632.pep
MDITRFMNKFNEIERQLSPTSALRLSFDNISPETEEPPDGNKRLWGVPVP
PFVSEKVVSWIEEEFNEAPVFYNGNSVLKKVENVRMIDRYNTKNPTVGTL
YLTATHLIFVEPDSNKETWILHMHVASIEKLPLSTTGSPLLIRCKTFLSV
TFVIPKDSECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAGWDYF
KLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSS
RFRSKGRLPVLTYLHNNKASICRCSQPLSGFSARCLEDEQMLEAIRKTNS
NTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGIENIHVQRA
SLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAVDKGV
SVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFS
ERCGHIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVH
SCQFGTFVGNCEKDRLDLKLAERTFSLWGYMANHLNEYINPLYKPNVDEA
IKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQH
LTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNEINDNKYNYDKKLS
ELSAADDDHPLKASNMSFASLSLSAEQSSPPQALPEEINSVAVDWKPMRN
VTTCSCSTPFDQFSKKTHCWRCGDIFCERCIDKNVALPGHDSGKPVPVCR
GCFRQMQKQSP*

BS15632.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG3530-PA 761 CG3530-PA 1..761 1..761 4077 100 Plus
CG3530-PB 689 CG3530-PB 6..689 78..761 3661 99.9 Plus
CG3530-PC 639 CG3530-PC 1..639 123..761 3428 100 Plus
mtm-PB 619 CG9115-PB 106..570 125..574 857 40.3 Plus
mtm-PA 619 CG9115-PA 106..570 125..574 857 40.3 Plus