Clone Sequence Records
BS15644.complete Sequence
2777 bp assembled on 2009-12-07
GenBank Submission: KX805036
> BS15644.complete
GAAGTTATCAGTCGACATGCAGAAGATCCGCCAACAGCACCAGCACTTGA
GTAGCAGCAACGGCCTTCTTGGCAATCAACCTCCTGGTCCGCCGCCACAG
GCCTTCAATCCATTGGCGGGCAATCCGGCAGCTCTCGCCTACAATCAGCT
TCCTCCGCATCCGCCGCACCACATGGCCGCCCATCTGGGCAGCTATGCCG
CTCCACCGCCTCACTATTACATGAGCCAGGCGAAGCCCGCGAAATATAAT
CACTATGGCAGCAATGCAAACAGCAACAGCGGCAGCAACAACAGCAACAG
CAACTATGCCCCCAAGGCCATACTGCAGAATACGTATAGGAATCAGAAGG
TGGTGGTTCCACCAGTGGTGCAGGAAGTAACCCCCGTGCCGGAACCGCCA
GTGACCACCAATAATGCCACCACCAACAGCACCAGCAACAGCACAGTCAT
AGCTAGCGAGCCTGTAACCCAAGAGGATACTTCTCAGAAGCCGGAGACTA
GACAGGAGCCAGCTTCAGCGGACGATCATGTCAGCACGGGGAATATCGAT
GCTACGGGAGCACTGTCCAACGAGGACACGAGCAGTTCAGGACGCGGGGG
CAAGGACAAGACCCCAATGTGCCTGGTCAATGAGTTGGCCAGGTACAACA
AGATCACGCATCAATATCGGTTGACTGAAGAACGAGGACCTGCCCACTGC
AAGACCTTCACGGTGACACTGATGCTGGGCGATGAGGAGTACTCGGCGGA
CGGTTTCAAGATTAAGAAAGCGCAACATTTGGCGGCTAGTAAGGCTATCG
AGGAAACCATGTACAAGCATCCGCCGCCGAAGATTCGCCGCAGCGAAGAA
GGCGGTCCCATGCGCACACACATTACGCCGACGGTGGAATTGAATGCCCT
GGCCATGAAGTTGGGACAGCGTACCTTCTACCTGCTGGATCCCACTCAGA
TTCCTCCCACGGATTCCATAGTGCCGCCGGAGTTTGCCGGCGGTCATTTA
CTAACTGCGCCAGGACCAGGGATGCCGCAACCACCTCCACCACCTGCTTA
CGCTCTCCGCCAGCGGCTTGGCAATGGATTCGTGCCCATTCCATCGCAGC
CGATGCATCCGCATTTCTTTCATGGACCAGGTCAGCGACCGTTTCCTCCG
AAGTTTCCATCACGCTTTGCGCTGCCACCGCCTCTCGGAGCTCATGTACA
TCATGGACCGAATGGCCCATTTCCATCCGTGCCTACGCCACCCAGCAAAA
TCACCCTGTTTGTGGGCAAGCAGAAGTTTGTGGGCATCGGACGCACACTG
CAGCAAGCGAAACATGACGCTGCGGCGAGAGCGCTGCAGGTTCTCAAGAC
ACAGGCCATATCTGCCTCTGAGGAGGCTCTCGAGGATTCGATGGATGAGG
GTGACAAGAAGTCGCCCATCTCGCAGGTTCACGAGATCGGAATTAAGCGC
AACATGACCGTTCATTTTAAGGTGTTGCGCGAGGAGGGGCCGGCGCACAT
GAAGAACTTTATAACAGCCTGCATTGTGGGATCTATTGTCACCGAAGGAG
AAGGAAATGGCAAAAAAGTGTCCAAGAAGCGTGCCGCGGAAAAGATGCTC
GTCGAGTTGCAAAAGCTGCCGCCCCTTACGCCCACCAAGCAAACGCCATT
GAAGCGGATTAAGGTTAAGACACCCGGCAAAAGTGGGGCAGCTGCCCGAG
AAGGTTCGGTTGTGTCGGGCACTGATGGTCCTACGCAAACGGGCAAGCCG
GAGAGACGTAAACGCCTCAATCCGCCGAAGGACAAGCTGATAGACATGGA
CGATGCGGATAATCCCATTACAAAGCTAATTCAACTGCAGCAGACGCGTA
AGGAAAAGGAACCCATTTTCGAGCTGATAGCCAAAAACGGCAATGAAACC
GCTCGACGACGGGAATTCGTTATGGAGGTCTCCGCCAGCGGGAGCACAGC
CCGTGGAACAGGCAACAGCAAGAAGTTGGCAAAGCGAAATGCTGCACAGG
CTCTGTTTGAACTGCTGGAAGCTGTTCAAGTCACACCAACCAACGAAACA
CAGTCATCGGAGGAATGCAGCACTTCGGCAACAATGTCCGCCGTTACAGC
GCCCGCAGTGGAGGCAACTGCGGAAGGCAAAGTGCCCATGGTAGCAACGC
CAGTGGGTCCCATGCCAGGCATTTTAATACTGCGCCAGAACAAGAAACCA
GCAAAGAAGAGGGATCAAATTGTAATTGTCAAGTCTAACGTGGAATCCAA
AGAGGAGGAGGCCAATAAGGAGGTGGCAGTTGCAGCTGAGGAGAATAGCA
ACAACAGTGCAAACTCTGGCGACAGCAGCAACAGCAGCAGCGGCGATTCG
CAAGCCACAGAGGCGGCTAGTGAGAGTGCACTGAATACCTCAACCGGCAG
CAATACGAGTGGTGTGAGTAGCAACAGCAGCAATGTTGGAGCCAACACGG
ATGGTAACAACCATGCCGAGAGTAAAAACAACACGGAGAGTAGCAGCAAC
AGTACGAGTAACACACAAAGCGCTGGTGTGCACATGAAGGAGCAGCTCTT
GTACCTTAGTAAACTGCTGGACTTTGAGGTCAACTTCTCGGACTATCCGA
AAGGCAATCATAACGAGTTCCTGACCATCGTGACATTGTCCACACATCCG
CCGCAGATCTGCCATGGCGTTGGCAAGAGCTCCGAGGAGTCGCAGAATGA
TGCTGCAAGCAATGCCTTGAAAATCCTCAGCAAGCTGGGGCTCAACAATG
CCATGAAATAAAAGCTTTCTAGACCAT
BS15644.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:50:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
stau-RB | 2745 | CG5753-PB | 1..2745 | 17..2761 | 13725 | 100 | Plus |
stau-RA | 3081 | CG5753-PA | 337..3081 | 17..2761 | 13725 | 100 | Plus |
stau-RC | 3078 | CG5753-PC | 337..3078 | 17..2761 | 13645 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
stau-RB | 4910 | CG5753-RB | 281..3025 | 17..2761 | 13725 | 100 | Plus |
stau-RA | 5240 | CG5753-RA | 611..3355 | 17..2761 | 13725 | 100 | Plus |
stau-RC | 3509 | CG5753-RC | 611..3352 | 17..2761 | 13645 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18120728..18122711 | 2000..17 | 9920 | 100 | Minus |
2R | 25286936 | 2R | 18120022..18120403 | 2580..2199 | 1910 | 100 | Minus |
2R | 25286936 | 2R | 18120467..18120665 | 2198..2000 | 995 | 100 | Minus |
2R | 25286936 | 2R | 18119781..18119965 | 2761..2577 | 925 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 01:50:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6857 | 2417..2546 | 150 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6888 | 2276..2432 | 137 | 60.5 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 115..204 | 2284..2371 | 137 | 67 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9145..9234 | 2284..2371 | 137 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1537..1587 | 2291..2341 | 129 | 72.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6786..6825 | 404..443 | 119 | 77.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6934 | 2297..2514 | 116 | 57.5 | Plus |
BS15644.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:41:58 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RB | 269..3011 | 17..2759 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:59:06 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 611..3353 | 17..2759 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:15:46 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RB | 269..3011 | 17..2759 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:53 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 611..3353 | 17..2759 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:53 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18119783..18119963 | 2579..2759 | 100 | <- | Minus |
2R | 18120024..18120403 | 2199..2578 | 100 | <- | Minus |
2R | 18120467..18120664 | 2001..2198 | 100 | <- | Minus |
2R | 18120728..18122711 | 17..2000 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:59:06 Download gff for
BS15644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14007288..14007468 | 2579..2759 | 100 | <- | Minus |
arm_2R | 14007529..14007908 | 2199..2578 | 100 | <- | Minus |
arm_2R | 14007972..14008169 | 2001..2198 | 100 | <- | Minus |
arm_2R | 14008233..14010216 | 17..2000 | 100 | | Minus |
BS15644.3prime Sequence
931 bp (843 high quality bases) assembled on 2006-12-21
> BS15644.3prime
ATGGTCTAGAAAGCTTTTATCTCTTGGCATTGTTGAGCCCCAGCTTGCTG
AGGATTTTCAAGGCATTGCTTGCAGCATCATTCTGCGACTCCTCGGAGCT
CTTGCCAACGCCATGGCAGATCTGCGGCGGATGTGTGGACAATGTCACGA
TGGTCAGGAACTCGTTATGATTGCCTTTCGGATAGTCCGAGAAGTTGACC
TCAAAGTCCAGCAGTTTACTAAGGTACAAGAGCTGCTCCTTCATGTGCAC
ACCAGCGCTTTGTGTGTTACTCGTACTGTTGCTGCTACTCTCCGTGTTGT
TTTTACTCTCGGCATGGTTGTTACCATCCGTGTTGGCTCCAACATTGCTG
CTGTTGCTACTCACACCACTCGTATTGCTGCCGGTTGAGGTATTCAGTGC
ACTCTCACTAGCCGCCTCTGTGGCTTGCGAATCGCCGCTGCTGCTGTTGC
TGCTGTCGCCAGAGTTTGCACTGTTGTTGCTATTCTCCTCAGCTGCAACT
GCCACCTCCTTATTGGCCTCCTCCTCTTTGGATTCCACGTTAGACTTGAC
AATTACAATTTGATCCCTCTTCTTTGCTGGTTTCTTGTTCTGGCGCAGTA
TTAAAATGCCTGGCATGGGACCCACTGGCGTTGCTACCATGGGCACTTTG
CCTTCCGCAGTTGCCTCCACTGCGGGCGCTGTAACGGCGGACATTGTTGC
CGAAGTGCTGCATTCCTCCGATGACTGTGTTTCGTTGGTTGGTGTGACTT
GAACAGCTTCCAGCAGTTCAAACAGAGCCTGTGCAGCATTTCGCTTTGCC
AACTTCTTGCTGTTGCCTGTTCCACGGGCTGTGCTCCCGCTGGCGGAGAC
CTCCATAACGAATTCCCGTCGTCGAGCGGTTTCATTGCCGTTTTTGGCTA
TCAGCTCGAAAATGGGTTTCCTTTTCCTTAC
BS15644.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5753-PA | 3081 | stau-RA | 2180..3073 | 918..25 | 4470 | 100 | Minus |
CG5753-PB | 2745 | stau-RB | 1844..2737 | 918..25 | 4470 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:06:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
stau-RB | 4910 | CG5753-RB | 2112..3025 | 931..17 | 4520 | 99.7 | Minus |
stau-RA | 5240 | CG5753-RA | 2442..3355 | 931..17 | 4520 | 99.7 | Minus |
stau-RC | 3509 | CG5753-RC | 2442..3352 | 931..17 | 4465 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18120022..18120403 | 198..579 | 1910 | 100 | Plus |
2R | 25286936 | 2R | 18120467..18120665 | 580..778 | 995 | 100 | Plus |
2R | 25286936 | 2R | 18119781..18119965 | 17..201 | 895 | 98.9 | Plus |
2R | 25286936 | 2R | 18120728..18120880 | 778..931 | 720 | 99.4 | Plus |
Blast to na_te.dros performed 2015-02-02 14:06:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6918 | 483..277 | 173 | 58.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6857 | 361..232 | 150 | 59.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6894 | 455..265 | 139 | 58.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6888 | 502..346 | 137 | 60.5 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1069..1145 | 508..437 | 137 | 71.4 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 115..204 | 494..407 | 137 | 67 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9145..9234 | 494..407 | 137 | 67 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2755..3002 | 512..256 | 130 | 53.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1537..1587 | 487..437 | 129 | 72.5 | Minus |
invader2 | 5124 | invader2 INVADER2 5124bp | 660..702 | 478..433 | 124 | 78.3 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6807..6944 | 484..350 | 114 | 57.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6661..6843 | 450..265 | 112 | 54.3 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1066..1133 | 502..437 | 109 | 66.2 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1083..1174 | 385..294 | 109 | 57.6 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 159..196 | 481..444 | 109 | 76.3 | Minus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9189..9226 | 481..444 | 109 | 76.3 | Minus |
BS15644.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:50 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-PB | 1832..2745 | 17..931 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:11:24 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5753-PB | 1832..2745 | 17..931 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:14:22 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 2442..3357 | 13..931 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:51:22 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 2442..3357 | 13..931 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:51:22 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18119779..18119963 | 13..199 | 97 | <- | Plus |
2R | 18120024..18120403 | 200..579 | 100 | <- | Plus |
2R | 18120467..18120664 | 580..777 | 100 | <- | Plus |
2R | 18120728..18120880 | 778..931 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:14:22 Download gff for
BS15644.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14007284..14007468 | 13..199 | 97 | <- | Plus |
arm_2R | 14007529..14007908 | 200..579 | 100 | <- | Plus |
arm_2R | 14007972..14008169 | 580..777 | 100 | <- | Plus |
arm_2R | 14008233..14008385 | 778..931 | 99 | | Plus |
BS15644.5prime Sequence
847 bp (763 high quality bases) assembled on 2006-12-21
> BS15644.5prime
GAAGTTATCCTTCGACATGCAGAAGATCCGCCAACAGCACCAGCACTTGA
GTAGCAGCAACGGCCTTCTTGGCAATCAACCTCCTGGTCCGCCGCCACAG
GCCTTCAATCCATTGGCGGGCAATCCGGCAGCTCTCGCCTACAATCAGCT
TCCTCCGCATCCGCCGCACCACATGGCCGCCCATCTGGGCAGCTATGCCG
CTCCACCGCCTCACTATTACATGAGCCAGGCGAAGCCCGCGAAATATAAT
CACTATGGCAGCAATGCAAACAGCAACAGCGGCAGCAACAACAGCAACAG
CAACTATGCCCCCAAGGCCATACTGCAGAATACGTATAGGAATCAGAAGG
TGGTGGTTCCACCAGTGGTGCAGGAAGTAACCCCCGTGCCGGAACCGCCA
GTGACCACCAATAATGCCACCACCAACAGCACCAGCAACAGCACAGTCAT
AGCTAGCGAGCCTGTAACCCAAGAGGATACTTCTCAGAAGCCGGAGACTA
GACAGGAGCCAGCTTCAGCGGACGATCATGTCAGCACGGGGAATATCGAT
GCTACGGGAGCACTGTCCAACGAGGACACGAGCAGTTCAGGACGCGGGGG
CAAGGACAAGACCCCAATGTGCCTGGTCAATGAGTTGGCCAGGTACAACA
AGATCACGCATCAATATCGGTTGACTGAAGAACGAGGACCTGCCCACTGC
AAGACCTTCACGGTGACACTGATGCTGGGCGATGAGGAGTACTCGGCGGA
CGGTTTCAAGATTAAGAAAGCGCAACATTTGGCGGCTAGTAAGGCTATCG
AGGAAACCATGTACAAGCATCCGCCGCCGAAGATTCGCCGCAGCGAA
BS15644.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:24:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5753-PA | 3081 | stau-RA | 337..1167 | 17..847 | 4155 | 100 | Plus |
CG5753-PB | 2745 | stau-RB | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:30:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
stau-RC | 3509 | CG5753-RC | 611..1441 | 17..847 | 4155 | 100 | Plus |
stau-RB | 4910 | CG5753-RB | 281..1111 | 17..847 | 4155 | 100 | Plus |
stau-RA | 5240 | CG5753-RA | 611..1441 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:29:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18121881..18122711 | 847..17 | 4155 | 100 | Minus |
Blast to na_te.dros performed 2015-02-10 18:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6888 | 276..443 | 127 | 54.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 936..1186 | 242..487 | 126 | 54.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6786..6825 | 404..443 | 119 | 77.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6562..6792 | 219..443 | 114 | 56.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2282..2338 | 384..443 | 113 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2377 | 404..449 | 113 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6760..6826 | 388..455 | 112 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1530..1589 | 390..449 | 110 | 68.9 | Plus |
BS15644.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:32:51 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-PB | 1..829 | 17..845 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:11:25 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5753-PB | 1..829 | 17..845 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:02:31 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 611..1441 | 17..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:00:48 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
stau-RA | 611..1441 | 17..847 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:00:48 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18121881..18122711 | 17..847 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:02:31 Download gff for
BS15644.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14009386..14010216 | 17..847 | 100 | | Minus |
BS15644.pep Sequence
Translation from 16 to 2760
> BS15644.pep
MQKIRQQHQHLSSSNGLLGNQPPGPPPQAFNPLAGNPAALAYNQLPPHPP
HHMAAHLGSYAAPPPHYYMSQAKPAKYNHYGSNANSNSGSNNSNSNYAPK
AILQNTYRNQKVVVPPVVQEVTPVPEPPVTTNNATTNSTSNSTVIASEPV
TQEDTSQKPETRQEPASADDHVSTGNIDATGALSNEDTSSSGRGGKDKTP
MCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIK
KAQHLAASKAIEETMYKHPPPKIRRSEEGGPMRTHITPTVELNALAMKLG
QRTFYLLDPTQIPPTDSIVPPEFAGGHLLTAPGPGMPQPPPPPAYALRQR
LGNGFVPIPSQPMHPHFFHGPGQRPFPPKFPSRFALPPPLGAHVHHGPNG
PFPSVPTPPSKITLFVGKQKFVGIGRTLQQAKHDAAARALQVLKTQAISA
SEEALEDSMDEGDKKSPISQVHEIGIKRNMTVHFKVLREEGPAHMKNFIT
ACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQTPLKRIKV
KTPGKSGAAAREGSVVSGTDGPTQTGKPERRKRLNPPKDKLIDMDDADNP
ITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGN
SKKLAKRNAAQALFELLEAVQVTPTNETQSSEECSTSATMSAVTAPAVEA
TAEGKVPMVATPVGPMPGILILRQNKKPAKKRDQIVIVKSNVESKEEEAN
KEVAVAAEENSNNSANSGDSSNSSSGDSQATEAASESALNTSTGSNTSGV
SSNSSNVGANTDGNNHAESKNNTESSSNSTSNTQSAGVHMKEQLLYLSKL
LDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICHGVGKSSEESQNDAASNA
LKILSKLGLNNAMK*
BS15644.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
stau-PB | 914 | CG5753-PB | 1..914 | 1..914 | 4745 | 100 | Plus |
stau-PA | 1026 | CG5753-PA | 113..1026 | 1..914 | 4745 | 100 | Plus |
stau-PC | 1025 | CG5753-PC | 113..1025 | 1..914 | 4729 | 99.9 | Plus |