Clone Sequence Records
BS15655.complete Sequence
191 bp assembled on 2010-02-09
GenBank Submission: KX804296
> BS15655.complete
GAAGTTATCAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATTAAAAGCTTTCTAGACCAT
BS15655.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:51:09 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:51:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 112..55 | 230 | 93.1 | Minus |
Rrp47-RB | 1285 | CG8928-RB | 1044..1093 | 160..111 | 205 | 94 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:51:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836295..15836457 | 17..179 | 815 | 100 | Plus |
X | 23542271 | X | 15946096..15946153 | 112..55 | 230 | 93.1 | Minus |
X | 23542271 | X | 15946008..15946057 | 160..111 | 205 | 94 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:51:09 has no hits.
BS15655.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:24 Download gff for
BS15655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..286 | 17..173 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:22:06 Download gff for
BS15655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..286 | 17..173 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:19 Download gff for
BS15655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..286 | 17..173 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 11:32:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:32:28 Download gff for
BS15655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836295..15836451 | 17..173 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:22:06 Download gff for
BS15655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730328..15730484 | 17..173 | 100 | | Plus |
BS15655.3prime Sequence
213 bp (213 high quality bases) assembled on 2006-12-21
> BS15655.3prime
TACAATAAGAGGGNGNGNNAAANGAANGGNNNAGAAAGNTTAAACCTTAG
AGGTGNNAAATTNNNGNGNNNGAAGGAAAAAAAGGANNANGNGAAANNTT
TAGAAAAGTTGGTGAGGTGCTCGAGAGTTGGAAAGTTAGAAGAATAGGGG
AAATGTGGGAGGGGGAAGNGGGNAATATTNGTNTAGGTNTTTGGGNGATG
TGGATTGATAANT
BS15655.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 19:25:06 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 11:55:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2015-02-12 11:55:32 has no hits.
Blast to na_te.dros performed on 2015-02-12 11:55:36 has no hits.
BS15655.3prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-12 13:58:56 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-12 13:58:56 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-29 23:21:48 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-29 23:21:48 has no hits.
BS15655.5prime Sequence
189 bp (189 high quality bases) assembled on 2006-12-21
> BS15655.5prime
GAAGTTATCCCTTTACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATTAAAAGCTTTCTAGACC
BS15655.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32582-PA | 159 | CG32582-RA | 1..159 | 17..175 | 795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 03:21:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rrp47-RB | 1285 | CG8928-RB | 1132..1189 | 112..55 | 230 | 93.1 | Minus |
Rrp47-RB | 1285 | CG8928-RB | 1044..1093 | 160..111 | 205 | 94 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 03:21:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15836295..15836457 | 17..179 | 815 | 100 | Plus |
X | 23542271 | X | 15946096..15946153 | 112..55 | 230 | 93.1 | Minus |
X | 23542271 | X | 15946008..15946057 | 160..111 | 205 | 94 | Minus |
Blast to na_te.dros performed on 2015-01-31 03:21:08 has no hits.
BS15655.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:10 Download gff for
BS15655.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 17..175 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:11:50 Download gff for
BS15655.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-PA | 1..159 | 17..175 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:46:57 Download gff for
BS15655.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32582-RA | 130..292 | 17..179 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-01-31 05:20:04 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:20:04 Download gff for
BS15655.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15836295..15836457 | 17..179 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:46:57 Download gff for
BS15655.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15730328..15730490 | 17..179 | 100 | | Plus |
BS15655.pep Sequence
Translation from 16 to 174
> BS15655.pep
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKGTHNHFCPAGTKIWKF
FY*
Sequence BS15655.pep has no blast hits.