Clone BS15655 Report

Search the DGRC for BS15655

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG32582-RA
Protein status:BS15655.pep: full length peptide match
Sequenced Size:191

Clone Sequence Records

BS15655.complete Sequence

191 bp assembled on 2010-02-09

GenBank Submission: KX804296

> BS15655.complete
GAAGTTATCAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATTAAAAGCTTTCTAGACCAT

BS15655.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:51:09 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
Rrp47-RB 1285 CG8928-RB 1132..1189 112..55 230 93.1 Minus
Rrp47-RB 1285 CG8928-RB 1044..1093 160..111 205 94 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15836295..15836457 17..179 815 100 Plus
X 23542271 X 15946096..15946153 112..55 230 93.1 Minus
X 23542271 X 15946008..15946057 160..111 205 94 Minus
Blast to na_te.dros performed on 2014-11-27 10:51:09 has no hits.

BS15655.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:24 Download gff for BS15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 130..286 17..173 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:22:06 Download gff for BS15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 130..286 17..173 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:06:19 Download gff for BS15655.complete
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 130..286 17..173 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 11:32:28 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:32:28 Download gff for BS15655.complete
Subject Subject Range Query Range Percent Splice Strand
X 15836295..15836451 17..173 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:22:06 Download gff for BS15655.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 15730328..15730484 17..173 100   Plus

BS15655.3prime Sequence

213 bp (213 high quality bases) assembled on 2006-12-21

> BS15655.3prime
TACAATAAGAGGGNGNGNNAAANGAANGGNNNAGAAAGNTTAAACCTTAG
AGGTGNNAAATTNNNGNGNNNGAAGGAAAAAAAGGANNANGNGAAANNTT
TAGAAAAGTTGGTGAGGTGCTCGAGAGTTGGAAAGTTAGAAGAATAGGGG
AAATGTGGGAGGGGGAAGNGGGNAATATTNGTNTAGGTNTTTGGGNGATG
TGGATTGATAANT

BS15655.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-06 19:25:06 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-12 11:55:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2015-02-12 11:55:32 has no hits.
Blast to na_te.dros performed on 2015-02-12 11:55:36 has no hits.

BS15655.3prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-12 13:58:56 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-12 13:58:56 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-29 23:21:48 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-29 23:21:48 has no hits.

BS15655.5prime Sequence

189 bp (189 high quality bases) assembled on 2006-12-21

> BS15655.5prime
GAAGTTATCCCTTTACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGT
CCCGCTCGCAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACC
TCAGCAAGTTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCAC
AAAAATTTGGAAATTCTTTTATTAAAAGCTTTCTAGACC

BS15655.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32582-PA 159 CG32582-RA 1..159 17..175 795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 03:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
Rrp47-RB 1285 CG8928-RB 1132..1189 112..55 230 93.1 Minus
Rrp47-RB 1285 CG8928-RB 1044..1093 160..111 205 94 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 03:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15836295..15836457 17..179 815 100 Plus
X 23542271 X 15946096..15946153 112..55 230 93.1 Minus
X 23542271 X 15946008..15946057 160..111 205 94 Minus
Blast to na_te.dros performed on 2015-01-31 03:21:08 has no hits.

BS15655.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:10 Download gff for BS15655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32582-PA 1..159 17..175 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:11:50 Download gff for BS15655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32582-PA 1..159 17..175 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:46:57 Download gff for BS15655.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 130..292 17..179 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-01-31 05:20:04 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:20:04 Download gff for BS15655.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15836295..15836457 17..179 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:46:57 Download gff for BS15655.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15730328..15730490 17..179 100   Plus

BS15655.pep Sequence

Translation from 16 to 174

> BS15655.pep
MGQGARRILRASRSQICGSLRTGEGSSTSASCRKGTHNHFCPAGTKIWKF
FY*
Sequence BS15655.pep has no blast hits.