Clone Sequence Records
BS15664.3prime Sequence
252 bp (252 high quality bases) assembled on 2006-12-21
> BS15664.3prime
ATGGTCTAGAAAGCTTTTCCCTTTAATGCATCCCATTGAATTGCTGGCGA
TCGGTTTTCACCATGTTGTTGTACTTCCACTTGTCAGCACTCGATGCTTG
ACTGCTCCAAGATCCCGATCCTGATCCCGAACCCGATCCAGAGCCGCTGC
TCGACTTGGAGTGGTTCTGACCCTTCGTGGACTGGTTGTCCTTTGTGGTG
CTGCTCAGGCACTTGTCGGTACGTTCGGTGTAGACCATGTCGACTGATAA
CT
BS15664.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10570-PA | 222 | CG10570-RA | 1..214 | 238..25 | 1070 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:33:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42502-RB | 1083 | CG42502-RB | 637..850 | 238..25 | 1070 | 100 | Minus |
CG42502-RA | 817 | CG42502-RA | 371..584 | 238..25 | 1070 | 100 | Minus |
CG42502-RC | 2159 | CG42502-RC | 371..584 | 238..25 | 1070 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:33:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18810269..18810482 | 25..238 | 1070 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 12:33:54 has no hits.
BS15664.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:26 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-PA | 1..214 | 25..238 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:13 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-PA | 1..214 | 25..238 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:38:50 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-RB | 627..850 | 25..249 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:03:02 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42502-RC | 361..584 | 25..249 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 14:03:02 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18810269..18810492 | 25..249 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:38:50 Download gff for
BS15664.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18810269..18810492 | 25..249 | 97 | | Plus |
BS15664.5prime Sequence
252 bp (252 high quality bases) assembled on 2006-12-21
> BS15664.5prime
GAAGTTATCCTTCGACATGGTCTACACCGAACGTACCGACAAGTGCCTGA
GCAGCACCACAAAGGACAACCAGTCCACGAAGGGTCAGAACCACTCCAAG
TCGAGCAGCGGCTCTGGATCGGGTTCGGGATCAGGATCGGGATCTTGGAG
CAGTCAAGCATCGAGTGCTGACAAGTGGAAGTACAACAACATGGTGAAAA
CCGATCGCCAGCAATTCAATGGGATGCATTTCTCCTAAAAGCTTTCTAGA
CC
BS15664.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10570-PA | 222 | CG10570-RA | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:14:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42502-RB | 1083 | CG42502-RB | 637..865 | 17..245 | 1130 | 99.6 | Plus |
CG42502-RA | 817 | CG42502-RA | 371..599 | 17..245 | 1130 | 99.6 | Plus |
CG42502-RC | 2159 | CG42502-RC | 371..599 | 17..245 | 1130 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 00:14:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18810254..18810482 | 245..17 | 1130 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-02-06 00:14:29 has no hits.
BS15664.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:27 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-PA | 1..222 | 17..238 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:14 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-PA | 1..222 | 17..238 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:35:51 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-RB | 637..873 | 17..252 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:36:09 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42502-RC | 371..607 | 17..252 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:36:09 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18810245..18810482 | 17..252 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:35:51 Download gff for
BS15664.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18810245..18810482 | 17..252 | 98 | | Minus |
BS15664.complete Sequence
254 bp assembled on 2009-08-24
GenBank Submission: KX804162
> BS15664.complete
GAAGTTATCAGTCGACATGGTCTACACCGAACGTACCGACAAGTGCCTGA
GCAGCACCACAAAGGACAACCAGTCCACGAAGGGTCAGAACCACTCCAAG
TCGAGCAGCGGCTCTGGATCGGGTTCGGGATCAGGATCGGGATCTTGGAG
CAGTCAAGCATCGAGTGCTGACAAGTGGAAGTACAACAACATGGTGAAAA
CCGATCGCCAGCAATTCAATGGGATGCATTTCTCCTAAAAGCTTTCTAGA
CCAT
BS15664.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:32:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10570-RB | 222 | CG10570-PB | 1..222 | 17..238 | 1110 | 100 | Plus |
CG10570-RC | 222 | CG10570-PC | 1..222 | 17..238 | 1110 | 100 | Plus |
CG10570-RA | 222 | CG10570-PA | 1..222 | 17..238 | 1110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42502-RB | 1083 | CG42502-RB | 637..865 | 17..245 | 1130 | 99.6 | Plus |
CG42502-RA | 817 | CG42502-RA | 371..599 | 17..245 | 1130 | 99.6 | Plus |
CG42502-RC | 2159 | CG42502-RC | 371..599 | 17..245 | 1130 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18810254..18810482 | 245..17 | 1130 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:32:22 has no hits.
BS15664.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:46 Download gff for
BS15664.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-RA | 371..590 | 17..236 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:50:30 Download gff for
BS15664.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10570-RB | 637..856 | 17..236 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:59 Download gff for
BS15664.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42502-RC | 371..590 | 17..236 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:59 Download gff for
BS15664.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18810263..18810482 | 17..236 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:30 Download gff for
BS15664.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18810263..18810482 | 17..236 | 100 | | Minus |
BS15664.pep Sequence
Translation from 16 to 237
> BS15664.pep
MVYTERTDKCLSSTTKDNQSTKGQNHSKSSSGSGSGSGSGSGSWSSQASS
ADKWKYNNMVKTDRQQFNGMHFS*
BS15664.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:45:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10570-PB | 73 | CG10570-PB | 1..73 | 1..73 | 387 | 100 | Plus |
CG10570-PC | 73 | CG10570-PC | 1..73 | 1..73 | 387 | 100 | Plus |
CG10570-PA | 73 | CG10570-PA | 1..73 | 1..73 | 387 | 100 | Plus |