Clone BS15667 Report

Search the DGRC for BS15667

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG16926-RA
Protein status:BS15667.pep: full length peptide match
Sequenced Size:416

Clone Sequence Records

BS15667.complete Sequence

416 bp assembled on 2010-02-09

GenBank Submission: KX805569

> BS15667.complete
GAAGTTATCAGTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGCAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGTGA
AAGCTTTCTAGACCAT

BS15667.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 384 CG16926-PB 1..384 17..400 1920 100 Plus
CG16926-RA 384 CG16926-PA 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..750 17..400 1920 100 Plus
CG16926-RA 884 CG16926-RA 272..655 17..400 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 284..140 725 100 Minus
2R 25286936 2R 19500929..19501052 140..17 620 100 Minus
2R 25286936 2R 19500524..19500639 400..285 580 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:45:15 has no hits.

BS15667.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:28 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 1..384 17..400 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:11 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 245..627 17..399 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:56 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 272..654 17..399 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:32:20 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 245..627 17..399 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:29:57 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 272..654 17..399 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:29:57 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19500716..19500859 141..284 100 <- Minus
2R 19500929..19501052 17..140 100   Minus
2R 19500525..19500639 285..399 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:56 Download gff for BS15667.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388221..15388364 141..284 100 <- Minus
arm_2R 15388434..15388557 17..140 100   Minus
arm_2R 15388030..15388144 285..399 100 <- Minus

BS15667.3prime Sequence

438 bp (438 high quality bases) assembled on 2006-12-21

> BS15667.3prime
TCCCTTTAAGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTCACCTTGTG
GGGGCGTACTCGTTCTTCTTCACATTGTGGGGGGAATAGCGATTGTACAA
TCCCCAGATGGAGTTCATCATCTTGTCGTTGTACTTGTTGGGCGAGTACT
CGCGTTGGGTTAGGGCGTTCCCGTTGTCAACGGAACCCTTATCTGCGGCA
GCGGACCTCAGACGGGCGATGATCAGCTCACGTTCGTTGAATTGCTCGCG
AATCTTGCAGGCTGCGAATGCACCTTGTGGAATGGCGGCCATCTTAACAA
CACTTAGGGAAATAACGCTCAGAAGGGAGATGATGAAGTCAAAGTTTCGC
AATGGGCTTGTATTCCAGCACTCGGTGAAATGCTGATCGAGATTGATGAT
TTTTCCGCACTGCTGCAGCAGCATGTCGACTGATAACT

BS15667.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PA 384 CG16926-RA 1..377 424..48 1860 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..750 424..41 1875 99.2 Minus
CG16926-RA 884 CG16926-RA 272..655 424..41 1875 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 157..301 725 100 Plus
2R 25286936 2R 19500929..19501052 301..424 620 100 Plus
2R 25286936 2R 19500524..19500639 41..156 535 97.4 Plus
Blast to na_te.dros performed on 2015-01-30 12:32:30 has no hits.

BS15667.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:32 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 41..424 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:21 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 41..424 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:38:22 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..655 41..427 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:02:41 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 270..655 41..427 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 14:02:41 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 19500528..19500639 46..156 98 <- Plus
2R 19500716..19500859 157..300 100 <- Plus
2R 19500929..19501054 301..427 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:38:22 Download gff for BS15667.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388033..15388144 46..156 98 <- Plus
arm_2R 15388221..15388364 157..300 100 <- Plus
arm_2R 15388434..15388559 301..427 99   Plus

BS15667.5prime Sequence

414 bp (414 high quality bases) assembled on 2006-12-21

> BS15667.5prime
GAAGTTATCCTTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGCAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGTGA
AAGCTTTCTAGACC

BS15667.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PA 384 CG16926-RA 1..384 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-RB 979 CG16926-RB 367..750 17..400 1920 100 Plus
CG16926-RA 884 CG16926-RA 272..655 17..400 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19500716..19500860 284..140 725 100 Minus
2R 25286936 2R 19500929..19501052 140..17 620 100 Minus
2R 25286936 2R 19500524..19500639 400..285 580 100 Minus
Blast to na_te.dros performed on 2015-02-11 09:29:15 has no hits.

BS15667.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:33 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 17..400 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:22 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-PA 1..384 17..400 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 13:16:55 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 261..655 5..400 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:55:05 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16926-RA 261..655 5..400 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:55:05 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 19500524..19500639 285..400 100 <- Minus
2R 19500716..19500859 141..284 100 <- Minus
2R 19500929..19501063 5..140 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 13:16:55 Download gff for BS15667.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15388029..15388144 285..400 100 <- Minus
arm_2R 15388221..15388364 141..284 100 <- Minus
arm_2R 15388434..15388568 5..140 97   Minus

BS15667.pep Sequence

Translation from 16 to 399

> BS15667.pep
MLLQQCGKIINLDQHFTECWNTSPLRNFDFIISLLSVISLSVVKMAAIPQ
GAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYND
KLMNSIWGLYNRYSPHNVKKNEYAPTK*

BS15667.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16926-PB 127 CG16926-PB 1..127 1..127 664 100 Plus
CG16926-PA 127 CG16926-PA 1..127 1..127 664 100 Plus