Clone Sequence Records
BS15667.complete Sequence
416 bp assembled on 2010-02-09
GenBank Submission: KX805569
> BS15667.complete
GAAGTTATCAGTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGCAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGTGA
AAGCTTTCTAGACCAT
BS15667.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-RB | 384 | CG16926-PB | 1..384 | 17..400 | 1920 | 100 | Plus |
CG16926-RA | 384 | CG16926-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:45:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-RB | 979 | CG16926-RB | 367..750 | 17..400 | 1920 | 100 | Plus |
CG16926-RA | 884 | CG16926-RA | 272..655 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:45:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19500716..19500860 | 284..140 | 725 | 100 | Minus |
2R | 25286936 | 2R | 19500929..19501052 | 140..17 | 620 | 100 | Minus |
2R | 25286936 | 2R | 19500524..19500639 | 400..285 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:45:15 has no hits.
BS15667.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:28 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:11 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 245..627 | 17..399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:56 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 272..654 | 17..399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:32:20 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 245..627 | 17..399 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:29:57 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 272..654 | 17..399 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:29:57 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19500716..19500859 | 141..284 | 100 | <- | Minus |
2R | 19500929..19501052 | 17..140 | 100 | | Minus |
2R | 19500525..19500639 | 285..399 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:56 Download gff for
BS15667.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15388221..15388364 | 141..284 | 100 | <- | Minus |
arm_2R | 15388434..15388557 | 17..140 | 100 | | Minus |
arm_2R | 15388030..15388144 | 285..399 | 100 | <- | Minus |
BS15667.3prime Sequence
438 bp (438 high quality bases) assembled on 2006-12-21
> BS15667.3prime
TCCCTTTAAGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTCACCTTGTG
GGGGCGTACTCGTTCTTCTTCACATTGTGGGGGGAATAGCGATTGTACAA
TCCCCAGATGGAGTTCATCATCTTGTCGTTGTACTTGTTGGGCGAGTACT
CGCGTTGGGTTAGGGCGTTCCCGTTGTCAACGGAACCCTTATCTGCGGCA
GCGGACCTCAGACGGGCGATGATCAGCTCACGTTCGTTGAATTGCTCGCG
AATCTTGCAGGCTGCGAATGCACCTTGTGGAATGGCGGCCATCTTAACAA
CACTTAGGGAAATAACGCTCAGAAGGGAGATGATGAAGTCAAAGTTTCGC
AATGGGCTTGTATTCCAGCACTCGGTGAAATGCTGATCGAGATTGATGAT
TTTTCCGCACTGCTGCAGCAGCATGTCGACTGATAACT
BS15667.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-PA | 384 | CG16926-RA | 1..377 | 424..48 | 1860 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:32:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-RB | 979 | CG16926-RB | 367..750 | 424..41 | 1875 | 99.2 | Minus |
CG16926-RA | 884 | CG16926-RA | 272..655 | 424..41 | 1875 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:32:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19500716..19500860 | 157..301 | 725 | 100 | Plus |
2R | 25286936 | 2R | 19500929..19501052 | 301..424 | 620 | 100 | Plus |
2R | 25286936 | 2R | 19500524..19500639 | 41..156 | 535 | 97.4 | Plus |
Blast to na_te.dros performed on 2015-01-30 12:32:30 has no hits.
BS15667.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:32 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-PA | 1..384 | 41..424 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:21 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-PA | 1..384 | 41..424 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:38:22 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 270..655 | 41..427 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:02:41 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 270..655 | 41..427 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 14:02:41 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19500528..19500639 | 46..156 | 98 | <- | Plus |
2R | 19500716..19500859 | 157..300 | 100 | <- | Plus |
2R | 19500929..19501054 | 301..427 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:38:22 Download gff for
BS15667.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15388033..15388144 | 46..156 | 98 | <- | Plus |
arm_2R | 15388221..15388364 | 157..300 | 100 | <- | Plus |
arm_2R | 15388434..15388559 | 301..427 | 99 | | Plus |
BS15667.5prime Sequence
414 bp (414 high quality bases) assembled on 2006-12-21
> BS15667.5prime
GAAGTTATCCTTCGACATGCTGCTGCAGCAGTGCGGAAAAATCATCAATC
TCGATCAGCATTTCACCGAGTGCTGGAATACAAGCCCATTGCGAAACTTT
GACTTCATCATCTCCCTTCTGAGCGTTATTTCCCTAAGTGTTGTTAAGAT
GGCCGCCATTCCACAAGGTGCATTCGCAGCCTGCAAGATTCGCGAGCAAT
TCAACGAACGTGAGCTGATCATCGCCCGTCTGAGGTCCGCTGCCGCAGAT
AAGGGTTCCGTTGACAACGGGAACGCCCTAACCCAACGCGAGTACTCGCC
CAACAAGTACAACGACAAGCTGATGAACTCCATCTGGGGATTGTACAATC
GCTATTCCCCCCACAATGTGAAGAAGAACGAGTACGCCCCCACCAAGTGA
AAGCTTTCTAGACC
BS15667.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-PA | 384 | CG16926-RA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:29:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-RB | 979 | CG16926-RB | 367..750 | 17..400 | 1920 | 100 | Plus |
CG16926-RA | 884 | CG16926-RA | 272..655 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:29:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19500716..19500860 | 284..140 | 725 | 100 | Minus |
2R | 25286936 | 2R | 19500929..19501052 | 140..17 | 620 | 100 | Minus |
2R | 25286936 | 2R | 19500524..19500639 | 400..285 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 09:29:15 has no hits.
BS15667.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:33 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-PA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:22 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-PA | 1..384 | 17..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 13:16:55 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 261..655 | 5..400 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:55:05 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16926-RA | 261..655 | 5..400 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:55:05 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19500524..19500639 | 285..400 | 100 | <- | Minus |
2R | 19500716..19500859 | 141..284 | 100 | <- | Minus |
2R | 19500929..19501063 | 5..140 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 13:16:55 Download gff for
BS15667.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15388029..15388144 | 285..400 | 100 | <- | Minus |
arm_2R | 15388221..15388364 | 141..284 | 100 | <- | Minus |
arm_2R | 15388434..15388568 | 5..140 | 97 | | Minus |
BS15667.pep Sequence
Translation from 16 to 399
> BS15667.pep
MLLQQCGKIINLDQHFTECWNTSPLRNFDFIISLLSVISLSVVKMAAIPQ
GAFAACKIREQFNERELIIARLRSAAADKGSVDNGNALTQREYSPNKYND
KLMNSIWGLYNRYSPHNVKKNEYAPTK*
BS15667.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16926-PB | 127 | CG16926-PB | 1..127 | 1..127 | 664 | 100 | Plus |
CG16926-PA | 127 | CG16926-PA | 1..127 | 1..127 | 664 | 100 | Plus |