Clone BS15669 Report

Search the DGRC for BS15669

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG16762-RA
Protein status:BS15669.pep: full length peptide match
Sequenced Size:797

Clone Sequence Records

BS15669.complete Sequence

797 bp assembled on 2010-02-09

GenBank Submission: KX805676

> BS15669.complete
GAAGTTATCAGTCGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTCAAGCAGCTTTTGAATTTGTTAAACTAAAAGCTTTCTAGACCAT

BS15669.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 765 CG16762-PA 1..765 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..785 17..781 3825 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 431..17 2075 100 Minus
3L 28110227 3L 2474767..2475118 781..430 1760 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:23:11 has no hits.

BS15669.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:29 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..765 17..781 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:40 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..763 17..779 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:09 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..783 17..779 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:37:58 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 1..763 17..779 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:19 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..783 17..779 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:19 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2474769..2475117 431..779 100 <- Minus
3L 2475181..2475594 17..430 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:09 Download gff for BS15669.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474769..2475117 431..779 100 <- Minus
arm_3L 2475181..2475594 17..430 100   Minus

BS15669.3prime Sequence

819 bp (733 high quality bases) assembled on 2006-12-21

> BS15669.3prime
TCCCTTTAAGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTTAGCTTTAC
AAATTCAAAAGCTGCTTGAACTGATCTTCGACGTTTAAAGGTGCCTCGGT
GGTGGTTGGTGGTTCGGTGGGTGCCTCGGTGGTCGTGGTAGTGGTGGTGG
TGGTGGTCGATGTGGAGGTCGTGGATGTGGGCTTGGGCATGGGCTTCGGC
TTAGCGCGACCATCCAGACAGGCCTGCAGGTAGTTGTAGTTCCTGGCAGT
GGACTCCACGTAGTGCCGCTCCGCCCTCTGGCAGCACTGCCCATGGCGCA
GATCTACCACTCGGTAGCGTTCCTCCAGCACGCTGGCCGACTCCGAGGCG
TTACCCGAGATGCTGTATGTGGAGACAGTGTTGTTGGAGCCCACATTGGC
ATGACATTGAAAGGATTCGAGGGTTGTGTTGAGCTCGTTGCAAGCCCTGA
GCTCGCTGCAAACTCTTTCGGATGAAAGTCGGATAGTCCGGCGAGTGGCC
AGGAAGTCGGCATCGATACCCTTCCTGGAGTCCGCCGCCGCATTGTAGCA
TTTGGTGTAGTTGGCACTGTACAGCTCCGCGATCAGGTTGGATTCACCGA
TGTAGCCACCGAAACATGCCACCGAGGCGAAGGGATCTGTCTGCGTGACC
CGTGAATTAAGGAACAGACGCGTGAGGCCATCCTGGGTGGGCAGACCCAC
GTATGGAGGCAATGGTCGGCTGATACCCTCCGCAGGAGACAAAACCAATA
AACCGATCATGGCCAGCGAGGCCAGGATTTTCACGGACGACATCTCGGGA
CACATGTCGACTGATAACT

BS15669.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 765 CG16762-RA 1..757 805..49 3785 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..785 805..41 3795 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 391..805 2075 100 Plus
3L 28110227 3L 2474767..2475118 41..392 1730 99.4 Plus
Blast to na_te.dros performed on 2015-02-08 07:33:52 has no hits.

BS15669.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:36 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 41..805 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:25 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 41..805 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:25:33 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..788 37..816 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:23:26 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 13..788 37..816 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:23:26 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 2474764..2475117 37..391 98 <- Plus
3L 2475181..2475602 392..816 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:25:33 Download gff for BS15669.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474764..2475117 37..391 98 <- Plus
arm_3L 2475181..2475602 392..816 99   Plus

BS15669.5prime Sequence

795 bp (762 high quality bases) assembled on 2006-12-21

> BS15669.5prime
GAAGTTATCCTTTGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTTCAGCAGCTTTTGAATTTGTTAAACTAAAAGCTTTCTAGACC

BS15669.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 765 CG16762-RA 1..765 17..781 3775 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-RA 885 CG16762-RA 21..785 17..781 3795 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 00:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2475180..2475594 431..17 2075 100 Minus
3L 28110227 3L 2474767..2475118 781..430 1730 99.4 Minus
Blast to na_te.dros performed on 2015-02-06 00:15:28 has no hits.

BS15669.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:37 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 17..781 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:26 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-PA 1..765 17..781 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:35:58 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..788 17..785 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:36:16 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
CG16762-RA 21..788 17..785 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:36:16 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 2474764..2475117 431..785 98 <- Minus
3L 2475181..2475594 17..430 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:35:58 Download gff for BS15669.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2474764..2475117 431..785 98 <- Minus
arm_3L 2475181..2475594 17..430 100   Minus

BS15669.pep Sequence

Translation from 16 to 780

> BS15669.pep
MCPEMSSVKILASLAMIGLLVLSPAEGISRPLPPYVGLPTQDGLTRLFLN
SRVTQTDPFASVACFGGYIGESNLIAELYSANYTKCYNAAADSRKGIDAD
FLATRRTIRLSSERVCSELRACNELNTTLESFQCHANVGSNNTVSTYSIS
GNASESASVLEERYRVVDLRHGQCCQRAERHYVESTARNYNYLQACLDGR
AKPKPMPKPTSTTSTSTTTTTTTTTTEAPTEPPTTTEAPLNVEDQFKQLL
NLLN*

BS15669.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG16762-PA 254 CG16762-PA 1..254 1..254 1312 100 Plus
CG10911-PA 359 CG10911-PA 3..221 8..238 252 29.7 Plus
CG5767-PA 253 CG5767-PA 1..236 8..239 229 26.7 Plus
CG5770-PA 213 CG5770-PA 25..206 41..227 204 26.7 Plus
CG11470-PB 230 CG11470-PB 8..227 19..229 203 27.3 Plus