Clone Sequence Records
BS15669.complete Sequence
797 bp assembled on 2010-02-09
GenBank Submission: KX805676
> BS15669.complete
GAAGTTATCAGTCGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTCAAGCAGCTTTTGAATTTGTTAAACTAAAAGCTTTCTAGACCAT
BS15669.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:23:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-RA | 765 | CG16762-PA | 1..765 | 17..781 | 3825 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-RA | 885 | CG16762-RA | 21..785 | 17..781 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:23:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2475180..2475594 | 431..17 | 2075 | 100 | Minus |
3L | 28110227 | 3L | 2474767..2475118 | 781..430 | 1760 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:23:11 has no hits.
BS15669.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:17:29 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 1..765 | 17..781 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:09:40 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 1..763 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:09 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 21..783 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:37:58 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 1..763 | 17..779 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:27:19 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 21..783 | 17..779 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:27:19 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2474769..2475117 | 431..779 | 100 | <- | Minus |
3L | 2475181..2475594 | 17..430 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:09 Download gff for
BS15669.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2474769..2475117 | 431..779 | 100 | <- | Minus |
arm_3L | 2475181..2475594 | 17..430 | 100 | | Minus |
BS15669.3prime Sequence
819 bp (733 high quality bases) assembled on 2006-12-21
> BS15669.3prime
TCCCTTTAAGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTTAGCTTTAC
AAATTCAAAAGCTGCTTGAACTGATCTTCGACGTTTAAAGGTGCCTCGGT
GGTGGTTGGTGGTTCGGTGGGTGCCTCGGTGGTCGTGGTAGTGGTGGTGG
TGGTGGTCGATGTGGAGGTCGTGGATGTGGGCTTGGGCATGGGCTTCGGC
TTAGCGCGACCATCCAGACAGGCCTGCAGGTAGTTGTAGTTCCTGGCAGT
GGACTCCACGTAGTGCCGCTCCGCCCTCTGGCAGCACTGCCCATGGCGCA
GATCTACCACTCGGTAGCGTTCCTCCAGCACGCTGGCCGACTCCGAGGCG
TTACCCGAGATGCTGTATGTGGAGACAGTGTTGTTGGAGCCCACATTGGC
ATGACATTGAAAGGATTCGAGGGTTGTGTTGAGCTCGTTGCAAGCCCTGA
GCTCGCTGCAAACTCTTTCGGATGAAAGTCGGATAGTCCGGCGAGTGGCC
AGGAAGTCGGCATCGATACCCTTCCTGGAGTCCGCCGCCGCATTGTAGCA
TTTGGTGTAGTTGGCACTGTACAGCTCCGCGATCAGGTTGGATTCACCGA
TGTAGCCACCGAAACATGCCACCGAGGCGAAGGGATCTGTCTGCGTGACC
CGTGAATTAAGGAACAGACGCGTGAGGCCATCCTGGGTGGGCAGACCCAC
GTATGGAGGCAATGGTCGGCTGATACCCTCCGCAGGAGACAAAACCAATA
AACCGATCATGGCCAGCGAGGCCAGGATTTTCACGGACGACATCTCGGGA
CACATGTCGACTGATAACT
BS15669.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-PA | 765 | CG16762-RA | 1..757 | 805..49 | 3785 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:33:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-RA | 885 | CG16762-RA | 21..785 | 805..41 | 3795 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2475180..2475594 | 391..805 | 2075 | 100 | Plus |
3L | 28110227 | 3L | 2474767..2475118 | 41..392 | 1730 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-08 07:33:52 has no hits.
BS15669.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:36 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-PA | 1..765 | 41..805 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:25 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-PA | 1..765 | 41..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:25:33 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 13..788 | 37..816 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:23:26 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 13..788 | 37..816 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:23:26 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2474764..2475117 | 37..391 | 98 | <- | Plus |
3L | 2475181..2475602 | 392..816 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:25:33 Download gff for
BS15669.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2474764..2475117 | 37..391 | 98 | <- | Plus |
arm_3L | 2475181..2475602 | 392..816 | 99 | | Plus |
BS15669.5prime Sequence
795 bp (762 high quality bases) assembled on 2006-12-21
> BS15669.5prime
GAAGTTATCCTTTGACATGTGTCCCGAGATGTCGTCCGTGAAAATCCTGG
CCTCGCTGGCCATGATCGGTTTATTGGTTTTGTCTCCTGCGGAGGGTATC
AGCCGACCATTGCCTCCATACGTGGGTCTGCCCACCCAGGATGGCCTCAC
GCGTCTGTTCCTTAATTCACGGGTCACGCAGACAGATCCCTTCGCCTCGG
TGGCATGTTTCGGTGGCTACATCGGTGAATCCAACCTGATCGCGGAGCTG
TACAGTGCCAACTACACCAAATGCTACAATGCGGCGGCGGACTCCAGGAA
GGGTATCGATGCCGACTTCCTGGCCACTCGCCGGACTATCCGACTTTCAT
CCGAAAGAGTTTGCAGCGAGCTCAGGGCTTGCAACGAGCTCAACACAACC
CTCGAATCCTTTCAATGTCATGCCAATGTGGGCTCCAACAACACTGTCTC
CACATACAGCATCTCGGGTAACGCCTCGGAGTCGGCCAGCGTGCTGGAGG
AACGCTACCGAGTGGTAGATCTGCGCCATGGGCAGTGCTGCCAGAGGGCG
GAGCGGCACTACGTGGAGTCCACTGCCAGGAACTACAACTACCTGCAGGC
CTGTCTGGATGGTCGCGCTAAGCCGAAGCCCATGCCCAAGCCCACATCCA
CGACCTCCACATCGACCACCACCACCACCACTACCACGACCACCGAGGCA
CCCACCGAACCACCAACCACCACCGAGGCACCTTTAAACGTCGAAGATCA
GTTTCAGCAGCTTTTGAATTTGTTAAACTAAAAGCTTTCTAGACC
BS15669.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-PA | 765 | CG16762-RA | 1..765 | 17..781 | 3775 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:15:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-RA | 885 | CG16762-RA | 21..785 | 17..781 | 3795 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-06 00:15:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2475180..2475594 | 431..17 | 2075 | 100 | Minus |
3L | 28110227 | 3L | 2474767..2475118 | 781..430 | 1730 | 99.4 | Minus |
Blast to na_te.dros performed on 2015-02-06 00:15:28 has no hits.
BS15669.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:37 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-PA | 1..765 | 17..781 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:26 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-PA | 1..765 | 17..781 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:35:58 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 21..788 | 17..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:36:16 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16762-RA | 21..788 | 17..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:36:16 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2474764..2475117 | 431..785 | 98 | <- | Minus |
3L | 2475181..2475594 | 17..430 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:35:58 Download gff for
BS15669.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2474764..2475117 | 431..785 | 98 | <- | Minus |
arm_3L | 2475181..2475594 | 17..430 | 100 | | Minus |
BS15669.pep Sequence
Translation from 16 to 780
> BS15669.pep
MCPEMSSVKILASLAMIGLLVLSPAEGISRPLPPYVGLPTQDGLTRLFLN
SRVTQTDPFASVACFGGYIGESNLIAELYSANYTKCYNAAADSRKGIDAD
FLATRRTIRLSSERVCSELRACNELNTTLESFQCHANVGSNNTVSTYSIS
GNASESASVLEERYRVVDLRHGQCCQRAERHYVESTARNYNYLQACLDGR
AKPKPMPKPTSTTSTSTTTTTTTTTTEAPTEPPTTTEAPLNVEDQFKQLL
NLLN*
BS15669.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16762-PA | 254 | CG16762-PA | 1..254 | 1..254 | 1312 | 100 | Plus |
CG10911-PA | 359 | CG10911-PA | 3..221 | 8..238 | 252 | 29.7 | Plus |
CG5767-PA | 253 | CG5767-PA | 1..236 | 8..239 | 229 | 26.7 | Plus |
CG5770-PA | 213 | CG5770-PA | 25..206 | 41..227 | 204 | 26.7 | Plus |
CG11470-PB | 230 | CG11470-PB | 8..227 | 19..229 | 203 | 27.3 | Plus |