Clone Sequence Records
BS15676.3prime Sequence
744 bp (590 high quality bases) assembled on 2006-12-21
> BS15676.3prime
TCTTTTAAGGGGCGCGCCAAANGAAGGGNCNAGAAAGCTTCTCCTTTAAA
CACTAACAGGGGGAACTGGGGGCAAAACGGCACCCGGAACCGCGGNAGGG
GCAGCGGGAGCNCCACCATTGGAGGCTTCTACCGTACCATTCACAGCATT
CCAGCCGAGGAGCTCTCGGATGATGCCATCCAATTGCACGGTATCAATGC
CCGCCTTCTGAAGTTCAGCCAGAACCTGTGTAGTTTCCACTGTAGTCAGC
CAACGTTCATACATGACTCGCAACCCCTGTAATCTCGACCAGAACTGGGC
GAAAATTCCCTGCTGCAACACCTTGGCATCGATGTGGGCTCGGATGGCAT
ACAGTGGAAAGTAGAGCTGAACTTCGTTTAGAAATCCTTGCCAGCCGAAA
ACGGTGCCGGACCAGTAGGGAAACTGGTTCAATAGACTCACTTTGAGCCT
CTGCTCCTCCAACTCAAAGGAACCGCCCGAGGCCAGGAGCTGCTGGTCCG
TCCACTGCAGAAAGAGAATGAGCTCCGGCTGCGAGAGCAGACGCCAGCGG
GCAGTGACTGCGGCATTGCTGTTGATAATCCGCACGAAGGCCTGGAACTG
GGCATCGTTGATTAGGTAGCGCACCAAGAGCTGGTTTAATGGCTTCGACT
GTATCAGACGCTGGATTTCTTCCAGATCCTGGGATAGAGTGGGTGGTGGA
GCCAAGGTAGCTGGCGGGCCCGGCGCCAACAGACCAACAGTTGG
BS15676.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-PA | 786 | CG14963-RA | 82..762 | 744..64 | 3242 | 98.9 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-RA | 932 | CG14963-RA | 86..780 | 744..50 | 3333 | 98.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3171766..3172460 | 50..744 | 3333 | 98.6 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:36:06 has no hits.
BS15676.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:52 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-PA | 82..776 | 50..744 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:42 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-PA | 82..776 | 50..744 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:51:14 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 86..780 | 50..744 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:08:31 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 86..780 | 50..744 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:08:31 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3171766..3172460 | 50..744 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:51:14 Download gff for
BS15676.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3171766..3172460 | 50..744 | 98 | | Plus |
BS15676.5prime Sequence
783 bp (710 high quality bases) assembled on 2006-12-21
> BS15676.5prime
GAAGTTATCCTTCGACATGGCCATCGCTCTGGACTGGCTTCTCCTGATTA
CCCTGGCCAGTGGATCCCTGGCACTGTGGTCTCCTCAGTTGGTGCCTCCA
ACTGTTGGTCTGTTGGCGCCGGGCCCGCCAGCTACCTTGGCTCCACCACC
CACTCTATCCCAGGATCTGGAAGAAATCCAGCGTCTGATACAGTCGAAGC
CATTAAACCAGCTCTTGGTGCGCTACCTAATCAACGATGCCCAGTTCCAG
GCCTTCGTGCGGATTATCAACAGCAATGCCGCAGTCACTGCCCGCTGGCG
TCTGCTCTCGCAGCCGGAGCTCATTCTCTTTCTGCAGTGGACGGACCAGC
AGCTCCTGGCCTCGGGCGGTTCCTTTGAGTTGGAGGAGCAGAGGCTCAAA
GTGAGTCTATTGAACCAGTTTCCCTACTGGTCCGGCACCGTTTTCGGCTG
GCAAGGATTTCTAAACGAAGTTCAGCTCTACTTTCCACTGTATGCCATCC
GAGCCCACATCGATGCCAAGGTGTTGCAGCAGGGAATTTTCGCCCAGTTC
TGGTCGAGATTACAGGGGTTGCGAGTCATGTATGAACGTTGGCTGACTAC
AGTGGAAACTACACAGGTTCTGGCTGAACTTCAGAAGGCGGGCATTGATA
CCGTGCAATTGGATGGCATCATCCGAGAGCTCCTCGGCTGGAATGCTGTG
AATGGTACGGTAGAAGCCTCCACTGGTGGAACTCCCGCTGCACCTACCGC
GATTCCGGGTGCAGTTTTGCCCCCAGTTACACT
BS15676.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-PA | 786 | CG14963-RA | 1..763 | 17..779 | 3815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-RA | 932 | CG14963-RA | 5..767 | 17..779 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:53:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3171779..3172541 | 779..17 | 3815 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 15:53:26 has no hits.
BS15676.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:53 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-PA | 1..768 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:43 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-PA | 1..768 | 17..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:49:49 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 2..772 | 14..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:32:08 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 2..772 | 14..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:32:08 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3171774..3172551 | 9..783 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:49:49 Download gff for
BS15676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3171774..3172551 | 9..783 | 99 | | Minus |
BS15676.complete Sequence
818 bp assembled on 2009-08-24
GenBank Submission: KX802203
> BS15676.complete
GAAGTTATCAGTCGACATGGCCATCGCTCTGGACTGGCTTCTCCTGATTA
CCCTGGCCAGTGGATCCCTGGCACTGTGGTCTCCTCAGTTGGTGCCTCCA
ACTGTTGGTCTGTTGGCGCCGGGCCCGCCAGCTACCTTGGCTCCACCACC
CACTCTATCCCAGGATCTGGAAGAAATCCAGCGTCTGATACAGTCGAAGC
CATTAAACCAGCTCTTGGTGCGCTACCTAATCAACGATGCCCAGTTCCAG
GCCTTCGTGCGGATTATCAACAGCAATGCCGCAGTCACTGCCCGCTGGCG
TCTGCTCTCGCAGCCGGAGCTCATTCTCTTTCTGCAGTGGACGGACCAGC
AGCTCCTGGCCTCGGGCGGTTCCTTTGAGTTGGAGGAGCAGAGGCTCAAA
GTGAGTCTATTGAACCAGTTTCCCTACTGGTCCGGCACCGTTTTCGGCTG
GCAAGGATTTCTAAACGAAGTTCAGCTCTACTTTCCACTGTATGCCATCC
GAGCCCACATCGATGCCAAGGTGTTGCAGCAGGGAATTTTCGCCCAGTTC
TGGTCGAGATTACAGGGGTTGCGAGTCATGTATGAACGTTGGCTGACTAC
AGTGGAAACTACACAGGTTCTGGCTGAACTTCAGAAGGCGGGCATTGATA
CCGTGCAATTGGATGGCATCATCCGAGAGCTCCTCGGCTGGAATGCTGTG
AATGGTACGGTAGAAGCCTCCACTGGTGGAACTCCCGCTGCACCTACCGC
GATTCCGGGTGCAGTTTTGCCCCCAGTTAACACTGTTAGTGTGGTTGTCT
AGAAGCTTTCTAGACCAT
BS15676.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:32:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-RA | 786 | CG14963-PA | 1..786 | 17..802 | 3930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:32:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-RA | 932 | CG14963-RA | 5..790 | 17..802 | 3930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:32:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3171756..3172541 | 802..17 | 3930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:32:04 has no hits.
BS15676.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:41 Download gff for
BS15676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 5..790 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:50:22 Download gff for
BS15676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 5..790 | 17..802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:54 Download gff for
BS15676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14963-RA | 5..790 | 17..802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:54 Download gff for
BS15676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3171756..3172541 | 17..802 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:22 Download gff for
BS15676.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3171756..3172541 | 17..802 | 100 | | Minus |
BS15676.pep Sequence
Translation from 16 to 801
> BS15676.pep
MAIALDWLLLITLASGSLALWSPQLVPPTVGLLAPGPPATLAPPPTLSQD
LEEIQRLIQSKPLNQLLVRYLINDAQFQAFVRIINSNAAVTARWRLLSQP
ELILFLQWTDQQLLASGGSFELEEQRLKVSLLNQFPYWSGTVFGWQGFLN
EVQLYFPLYAIRAHIDAKVLQQGIFAQFWSRLQGLRVMYERWLTTVETTQ
VLAELQKAGIDTVQLDGIIRELLGWNAVNGTVEASTGGTPAAPTAIPGAV
LPPVNTVSVVV*
BS15676.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14963-PA | 261 | CG14963-PA | 1..261 | 1..261 | 1334 | 100 | Plus |
| CG13905-PB | 238 | CG13905-PB | 21..226 | 29..228 | 310 | 35.9 | Plus |
