Clone Sequence Records
BS15678.3prime Sequence
795 bp (737 high quality bases) assembled on 2006-12-21
> BS15678.3prime
ATGGTCTAGAAAGCTTTCACCCTTCCAGAATCTCGGTGAGAATGCGTTGC
GTATCCTTGGGAGTATATACCCTATGGCTGATGGTTCGAGGATCGCTATA
GATCTCATAGTCATTGCCGCCCGGCTCCGTTTTATCGCCAAAGAAGTGGA
TTTCCTTGAACTTGTAGTGCGCTTCGATGTGTCGCAGGCAGTAGGTCTTG
TCCCAACCATGCGGGAAGACATCGAAGCTGATCTGACCACCAATCGAGTA
CGTGAGATCCACATCGGCAAACTCCTGCTTCAGGTCCTTGATCATTTTCT
CGCGCACCTTGTGCTCAATGTCGTATTCGGCGAACATGTTGCGCTCCTCC
CGAGTGCACTGCCTGCCAATGGGACATACGTTCATCATGCCATTTCGGAA
TTCGATAAAGGTGCCCCTCTTGATGGGCACATCCAGTTCGGACAGATAGC
GCAGCACAAAGTTAATGAAGCGTTTCACCGTCTCCTCGCCCAAATGCATG
ATGATATTCTGCTTTCCCACCTCCTTTCCGCCCTCAATCTGCACCAGCCC
ATTTTCTGGGAATATGAAGTCGAACTCGTTGAGTATCTTCCTGCCATTCA
GCTGCTCGAACATCTTCTCCAAATCCGAGCCTCCGACGATTCCGATGGTC
GCCCTCGGCTTAACCCGCGAGTAGAAGAACTCCTCGAACTCCGGAGTGAC
CACGGATCTGGGCATCGTTAGCGTGCCGTCCACGTCGAAGAGCAGCAGGA
TTTCATCACGCTTCAATGCGGCGGTGGTCATGTCGACTGATAACT
BS15678.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-PA | 765 | CG10688-RA | 1..758 | 781..24 | 3565 | 98.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:37:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-RA | 924 | CG10688-RA | 66..823 | 781..24 | 3655 | 98.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:37:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12534655..12535412 | 781..24 | 3655 | 98.8 | Minus |
Blast to na_te.dros performed 2015-01-30 16:37:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 3938..3977 | 426..465 | 110 | 75 | Plus |
BS15678.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:56 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-PA | 1..765 | 17..781 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:48 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-PA | 1..765 | 17..781 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:51:28 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..830 | 17..781 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:08:43 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..830 | 17..781 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:08:43 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12534655..12535413 | 20..781 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:51:28 Download gff for
BS15678.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12527755..12528513 | 20..781 | 98 | <- | Minus |
BS15678.5prime Sequence
795 bp (795 high quality bases) assembled on 2006-12-21
> BS15678.5prime
GAAGTTATCCTTCGACATGACCACCGCCGCATTGAAGCGTGATGAAATCC
TGCTGCTCTTCGACGTGGACGGCACGCTAACGATGCCCAGATCCGTGGTC
ACTCCGGAGTTCGAGGAGTTCTTCTACTCGCGGGTTAAGCCGAGGGCGAC
CATCGGAATCGTCGGAGGCTCGGATTTGGAGAAGATGTTCGAGCAGCTGA
ATGGCAGGAAGATACTCAACGAGTTCGACTTCATATTCCCAGAAAATGGG
CTGGTGCAGATTGAGGGCGGAAAGGAGGTGGGAAAGCAGAATATCATCAT
GCATTTGGGCGAGGAGACGGTGAAACGCTTCATTAACTTTGTGCTGCGCT
ATCTGTCCGAACTGGATGTGCCCATCAAGAGGGGCACCTTTATCGAATTC
CGAAATGGCATGATGAACGTATGTCCCATTGGCAGGCAGTGCACTCGGGA
GGAGCGCAACATGTTCGCCGAATACGACATTGAGCACAAGGTGCGCGAGA
AAATGATCAAGGACCTGAAGCAGGAGTTTGCCGATGTGGATCTCACGTAC
TCGATTGGTGGTCAGATCAGCTTCGATGTCTTCCCGCATGGTTGGGACAA
GACCTACTGCCTGCGACACATCGAAGCGCACTACAAGTTCAAGGAAATCC
ACTTCTTTGGCGATAAAACGGAGCCGGGCGGCAATGACTATGAGATCTAT
AGCGATCCTCGAACCATCAGCCATAGGGTATATACTCCCAAGGATACGCA
ACGCATTCTCACCGAGATTCTGGAGCTGTGAAAGCTTTCTAGACC
BS15678.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-PA | 765 | CG10688-RA | 1..765 | 17..781 | 3600 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:19:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-RA | 924 | CG10688-RA | 66..830 | 17..781 | 3690 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:19:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12534655..12535419 | 17..781 | 3690 | 98.8 | Plus |
Blast to na_te.dros performed 2015-01-30 12:19:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 3938..3977 | 372..333 | 110 | 75 | Minus |
BS15678.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:33:57 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-PA | 1..765 | 17..781 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:50 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-PA | 1..765 | 17..781 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:34:32 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..840 | 17..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 13:59:28 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..840 | 17..792 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 13:59:28 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12534655..12535429 | 17..792 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:34:32 Download gff for
BS15678.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12527755..12528529 | 17..792 | 98 | | Plus |
BS15678.complete Sequence
797 bp assembled on 2006-11-29
GenBank Submission: FJ637945
> BS15678.complete
GAAGTTATCAGTCGACATGACCACCGCCGCATTGAAGCGTGATGAAATCC
TGCTGCTCTTCGACGTGGACGGCACGCTAACGATGCCCAGATCCGTGGTC
ACTCCGGAGTTCGAGGAGTTCTTCTACTCGCGGGTTAAGCCGAGGGCGAC
CATCGGAATCGTCGGAGGCTCGGATTTGGAGAAGATGTTCGAGCAGCTGA
ATGGCAGGAAGATACTCAACGAGTTCGACTTCATATTCCCAGAAAATGGG
CTGGTGCAGATTGAGGGCGGAAAGGAGGTGGGAAAGCAGAATATCATCAT
GCATTTGGGCGAGGAGACGGTGAAACGCTTCATTAACTTTGTGCTGCGCT
ATCTGTCCGAACTGGATGTGCCCATCAAGAGGGGCACCTTTATCGAATTC
CGAAATGGCATGATGAACGTATGTCCCATTGGCAGGCAGTGCACTCGGGA
GGAGCGCAACATGTTCGCCGAATACGACATTGAGCACAAGGTGCGCGAGA
AAATGATCAAGGACCTGAAGCAGGAGTTTGCCGATGTGGATCTCACGTAC
TCGATTGGTGGTCAGATCAGCTTCGATGTCTTCCCGCATGGTTGGGACAA
GACCTACTGCCTGCGACACATCGAAGCGCACTACAAGTTCAAGGAAATCC
ACTTCTTTGGCGATAAAACGGAGCCGGGCGGCAATGACTATGAGATCTAT
AGCGATCCTCGAACCATCAGCCATAGGGTATATACTCCCAAGGATACGCA
ACGCATTCTCACCGAGATTCTGGAGCTGTGAAAGCTTTCTAGACCAT
BS15678.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:44:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-RA | 765 | CG10688-PA | 1..765 | 17..781 | 3690 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:44:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-RA | 924 | CG10688-RA | 66..830 | 17..781 | 3690 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:44:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12534655..12535419 | 17..781 | 3690 | 98.8 | Plus |
Blast to na_te.dros performed 2014-11-27 23:44:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 3938..3977 | 372..333 | 110 | 75 | Minus |
BS15678.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:24:06 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 1..765 | 17..781 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:27 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..840 | 17..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:52 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..829 | 17..780 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:24:06 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..840 | 17..792 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:20 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10688-RA | 66..829 | 17..780 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:20 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12534655..12535418 | 17..780 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:52 Download gff for
BS15678.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12527755..12528518 | 17..780 | 98 | | Plus |
BS15678.pep Sequence
Translation from 16 to 780
> BS15678.pep
MTTAALKRDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVG
GSDLEKMFEQLNGRKILNEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEE
TVKRFINFVLRYLSELDVPIKRGTFIEFRNGMMNVCPIGRQCTREERNMF
AEYDIEHKVREKMIKDLKQEFADVDLTYSIGGQISFDVFPHGWDKTYCLR
HIEAHYKFKEIHFFGDKTEPGGNDYEIYSDPRTISHRVYTPKDTQRILTE
ILEL*
BS15678.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:17:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10688-PA | 254 | CG10688-PA | 1..254 | 1..254 | 1340 | 100 | Plus |