Clone Sequence Records
BS15680.3prime Sequence
858 bp (815 high quality bases) assembled on 2006-12-21
> BS15680.3prime
TCCCTTAAGGGGCGCGCCAAACGAATGGTCTAGAAAGCTTTTACCCTTCC
TCATTAAGTACGGGATACACGAAGGTATCGGCGGTATCCTTTCCGACGAC
GTTGCGGGCTATGCACTTGTAGTTGCCCATATCCTCCCACTTGATCTCGG
AGATCAGAAGATCGCCGTTGGCCAGCACCCTGTGGCGATGTCCTTGGACG
ATCTCCTTGTTCTCGTTATTCAACCAGGTGATCTCGGCGCGGGGACGGGC
GTGCACGCGGCAGGGCAGCTGAATGTTGGAGCCCATGAGGTCCAGATGCG
TCTTCTCGGTGTAGATGATTCGCGGTTTCTGGGCACCCGGGTAGGTCTTC
TCCGGCGTCAGACGAGAGGAGCGAGGAGGATGCACCACAGTGCTGGCATA
GATGGTCTTGGAGCCAGTGCGTCCCACACACGTGTAGGTGCGGGCCTCGC
TCAGCACGTGGTCGATGATATGCGACGATCGGACGCGCACAATGGCACTG
GGCGCCTCTTCGGCAACCTGGTTGGAGTCCAGATCATCGAGCTCCGAGCG
GGGCAGGTGACCCACCACCCACTGGATGCTGGGCACTTGGGAGCCCATCA
TCTCGCAAACGATCTCGATGGTGGCTCCATCGGCCTGCTGCAGCTTCGTC
GGCGGCGTCTTGGTGAACTTGAGCCAGTCGGCTTCGAAGGCTCGGTTGCG
TGGCTTCTCCTCCTCCGCCTCGATGGAGTTATCCACGTCGTTGCTATCGT
CTACCAGGTCCACGGCTCTTCCGCGGACAGTGGCGATGCTGCCGAACAGC
AGCAGCGCTAAGGCGCACACATGTAAATTCATTTTCGCCTCCATGTCGAC
TGATAACT
BS15680.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15009-PC | 804 | ImpL2-RC | 1..799 | 844..46 | 3995 | 100 | Minus |
CG15009-PA | 801 | ImpL2-RA | 6..796 | 836..46 | 3955 | 100 | Minus |
CG15009-PB | 792 | ImpL2-RB | 1..787 | 832..46 | 3935 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:57:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RC | 989 | CG15009-RC | 59..857 | 844..46 | 3995 | 100 | Minus |
ImpL2-RD | 2355 | CG15009-RD | 729..1519 | 836..46 | 3955 | 100 | Minus |
ImpL2-RB | 1651 | CG15009-RB | 729..1519 | 836..46 | 3955 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:57:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225707 | 56..836 | 3905 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 14:57:23 has no hits.
BS15680.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:00 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..804 | 41..844 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:54 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..804 | 41..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:21:54 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..863 | 40..844 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:48:24 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..863 | 40..844 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:48:24 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224922..4225711 | 50..843 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:21:54 Download gff for
BS15680.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224922..4225711 | 50..843 | 99 | | Plus |
BS15680.5prime Sequence
816 bp (714 high quality bases) assembled on 2006-12-21
> BS15680.5prime
GAAGTTATCCCTTTACATGGAGGCGAAAATGAATTTACATGTGTGCGCCT
TAGCGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTG
GACCTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGA
GGAGAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCA
AGACGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATC
GTTTGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGG
TCACCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCG
AAGAGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGAC
CACGTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTC
CAAGACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTC
TGACGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTAC
ACCGAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTG
CCGCGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGA
ACAAGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGAT
CTTCTGATCTCCGAGATNCAGTGGGAGGATATGGGCAACTACAAGTGCAT
AGCCCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCG
TACTTAATGAGGAAGA
BS15680.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15009-PC | 804 | ImpL2-RC | 1..800 | 17..816 | 3956 | 99.7 | Plus |
CG15009-PA | 801 | ImpL2-RA | 6..797 | 25..816 | 3916 | 99.7 | Plus |
CG15009-PB | 792 | ImpL2-RB | 1..788 | 29..816 | 3896 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:34:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RC | 989 | CG15009-RC | 59..858 | 17..816 | 3974 | 99.8 | Plus |
ImpL2-RD | 2355 | CG15009-RD | 729..1520 | 25..816 | 3934 | 99.7 | Plus |
ImpL2-RB | 1651 | CG15009-RB | 729..1520 | 25..816 | 3934 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:34:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225707 | 805..25 | 3879 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-08 07:34:34 has no hits.
BS15680.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:01 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..799 | 17..815 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:55 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15009-PC | 1..799 | 17..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:25:41 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 50..857 | 9..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:23:33 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 50..857 | 9..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:23:33 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224922..4225711 | 18..811 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:25:41 Download gff for
BS15680.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224922..4225711 | 18..811 | 98 | | Minus |
BS15680.complete Sequence
860 bp assembled on 2008-08-14
GenBank Submission: KX802583
> BS15680.complete
GAAGTTATCAGTCGACATGGAGGCGAAAATGAATTTACATGTGTGCGCCT
TAGCGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTG
GACCTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGA
GGAGAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCA
AGACGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATC
GTTTGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGG
TCACCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCG
AAGAGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGAC
CACGTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTC
CAAGACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTC
TGACGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTAC
ACCGAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTG
CCGCGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGA
ACAAGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGAT
CTTCTGATCTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCAT
AGCCCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCG
TACTTAATGAGGAAGACTAAAAGCTTTCTAGACCATTCGTTTGGCGCGCC
CCTTAAGGGA
BS15680.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:45:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RC | 804 | CG15009-PC | 1..804 | 17..820 | 4020 | 100 | Plus |
ImpL2-RA | 801 | CG15009-PA | 6..801 | 25..820 | 3980 | 100 | Plus |
ImpL2-RD | 792 | CG15009-PD | 1..792 | 29..820 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:45:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-RC | 989 | CG15009-RC | 59..863 | 17..821 | 4025 | 100 | Plus |
ImpL2-RD | 2355 | CG15009-RD | 729..1525 | 25..821 | 3985 | 100 | Plus |
ImpL2-RB | 1651 | CG15009-RB | 729..1525 | 25..821 | 3985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:45:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4224927..4225707 | 805..25 | 3905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:45:53 has no hits.
BS15680.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:59:39 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..870 | 17..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:19 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..870 | 17..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:56 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..870 | 17..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:43 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpL2-RC | 59..870 | 17..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:43 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4224927..4225711 | 18..805 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:19 Download gff for
BS15680.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4224927..4225711 | 18..805 | 99 | | Minus |
BS15680.pep Sequence
Translation from 16 to 819
> BS15680.pep
MEAKMNLHVCALALLLFGSIATVRGRAVDLVDDSNDVDNSIEAEEEKPRN
RAFEADWLKFTKTPPTKLQQADGATIEIVCEMMGSQVPSIQWVVGHLPRS
ELDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYA
STVVHPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHAR
PRAEITWLNNENKEIVQGHRHRVLANGDLLISEIKWEDMGNYKCIARNVV
GKDTADTFVYPVLNEED*
BS15680.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:48:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpL2-PC | 267 | CG15009-PC | 1..267 | 1..267 | 1394 | 100 | Plus |
ImpL2-PA | 266 | CG15009-PA | 3..266 | 4..267 | 1380 | 100 | Plus |
ImpL2-PD | 263 | CG15009-PD | 1..263 | 5..267 | 1375 | 100 | Plus |
ImpL2-PB | 263 | CG15009-PB | 1..263 | 5..267 | 1375 | 100 | Plus |
Nrg-PH | 1239 | CG1634-PH | 341..512 | 60..256 | 152 | 26.7 | Plus |