Clone Sequence Records
BS15681.3prime Sequence
326 bp (326 high quality bases) assembled on 2006-12-21
> BS15681.3prime
TCCCATAAAAGGGCGCGCNAAANGAANGGNNNAGAAAGNANACCCCTTAA
GGAGGCAAGGGNGNAAAAAACGAGGNGCAGGGNNNCCNTGGNGCGGNNNC
NCNGNGNACGAAANGAGGCGATAAAAACCAAACCCCCGGCGGGCAGCGAA
NCAAGTGGCGGGGGGCAAAACGACCCAGAGAACGCCAAAANGGGAAGGCG
GGCGGGAGGAGGGCCCGGACGACGACGCCGCGCCGCCAAGGACGCCGGAG
GCNACGCAAGCAGGGAGGAAAGAGGGNCGAANCGAAAAGCAAAANCAGGA
CGACCGANAACNGCGGAAAAGGGAGG
BS15681.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31451-PA | 258 | CG31451-RA | 40..106 | 259..193 | 166 | 89.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 16:47:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984154..23984340 | 294..108 | 449 | 81.8 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:47:33 has no hits.
BS15681.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:02 Download gff for
BS15681.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 23..106 | 193..276 | 85 | | Minus |
CG31451-PA | 167..191 | 108..132 | 92 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 13:12:57 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-10 18:25:25 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2015-02-10 18:25:25 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-19 18:32:31 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-19 18:32:31 has no hits.
BS15681.5prime Sequence
289 bp (289 high quality bases) assembled on 2006-12-21
> BS15681.5prime
GAAGTTATCCTTTTAGGTGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCTGACGTCGTCGTCCG
GACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAG
CCCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCT
CATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTT
TACACCCTTGCGTTATGTTTTTTGAAAGCTTTCTAGACC
BS15681.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31451-PA | 258 | CG31451-RA | 70..258 | 87..275 | 945 | 100 | Plus |
CG31451-PA | 258 | CG31451-RA | 2..69 | 18..85 | 340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-10 14:55:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:55:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984151..23984408 | 18..276 | 1245 | 99.6 | Plus |
Blast to na_te.dros performed 2015-02-10 14:55:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 818..853 | 80..45 | 108 | 77.8 | Minus |
BS15681.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:03 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 2..258 | 18..275 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:12:58 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-PA | 2..258 | 18..275 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:48:00 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984149..23984416 | 14..285 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:48:00 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984149..23984416 | 14..285 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:21:28 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809871..19810138 | 14..285 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:21:28 Download gff for
BS15681.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809871..19810138 | 14..285 | 97 | | Plus |
BS15681.complete Sequence
290 bp assembled on 2009-08-24
GenBank Submission: KX804102
> BS15681.complete
GAAGTTATCAGTCGACATGATTTTGCTTTACGATTCGACCCACTATCATC
CCAGATTGCGTAGCCTCCGGCGTCCTTGGCGACGCGACGTCGTCGTCCGG
ACCATCCTCCAGCACGCCTTCCAAAATTGGCGTTCACTGGATCGATTAGC
CCCCAGCAAATTGAATCGCAGCCCGCAGGAGATTTGGTTATTATCGCCTC
ATTTCGTACAAAGAGAAACCGCAACAAGGAAACACTGCACATCGTTTTTT
ACACCCTTGCGTTATGTTTTTTGAAAGCTTTCTAGACCAT
BS15681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 01:31:52 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 01:31:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23984150..23984408 | 17..275 | 1295 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:31:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
diver2 | 4917 | diver2 DIVER2 4917bp | 818..853 | 80..45 | 108 | 77.8 | Minus |
BS15681.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-26 17:02:38 Download gff for
BS15681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31451-RA | 805..1061 | 17..273 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:51 Download gff for
BS15681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984406 | 17..273 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:51 Download gff for
BS15681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23984150..23984406 | 17..273 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:18 Download gff for
BS15681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810128 | 17..273 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:50:18 Download gff for
BS15681.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19809872..19810128 | 17..273 | 100 | | Plus |
BS15681.pep Sequence
Translation from 16 to 273
> BS15681.pep
MILLYDSTHYHPRLRSLRRPWRRDVVVRTILQHAFQNWRSLDRLAPSKLN
RSPQEIWLLSPHFVQRETATRKHCTSFFTPLRYVF*
Sequence BS15681.pep has no blast hits.