Clone Sequence Records
BS15689.complete Sequence
929 bp assembled on 2010-02-09
GenBank Submission: KX801368
> BS15689.complete
GAAGTTATCAGTCGACATGGCAGAATACAACATGAGCCACATGGTGCGAC
CCCAGGGATTCAGTTTGGAAGAGCTGCGTCAGACTATGAGTCGATCGGCG
ATTCGGGAACAATGCTACTTTATTTATGCCACCGGCAATATTCTGGAGAT
TATATCTGGTTTTGATGAACTGCTCAACCAGGAGGGGATCCAATTCGGAG
CAGATAAACTGGCTGCGGTGTATGTATGCGGTTTGATGGTTTATCTACTC
CATCATGAGGACACGTCGGCCACCCAGGTGAAAAGAACTCTTTTCCTGCA
AAAGTGCTTCAATTATATGGCATGCTCCGAGGAAAGCCATATCCACCAGG
TATGCGTCCATGTCCTGGGTCTCTTGGATATCCAGAGTTCGAGCACAATG
CTCAACCTGATCCTCGGCTGCCGCGTGGCCAGTCCGCTGTGCACAATGGC
CAGCGTTGTGGCTAACTGTCTGCTCTGGGCCATGTTGGATCATATGTCGG
ACTTGGGCCTGGACTTGCACCGATTGCGTCCGGCTAACACACTGCTGCTC
GTCGTTGCCGTGGTGAAGCCGCATATTTATGTAATATCCTATTTGCATTC
CCTGCACCTGGTGGTCCGTTTGATATCCAGCATCCTGCTGATCGGACCAT
TCAATGCCCAGGGCCAGCAACTGTGCCAGGAGACCGATGTGCCGGAGGAT
TATATGAAACTGGCCAGGGACGATTGTTCGATATTAGTTCGCTGGCTAAT
CGCGATCGTTGATGAGCTGCGTCCGCTGATGGTGGAGAACAACGATTTGG
GGCATCTGCATGAGCGCCTGGTGCTTTTGGAGTCCATATGTGAGCTTATG
CAGCTCTTGCATGGCCATTTGGTTAAGTGTTACCAAGGCAAAAGTGGACC
ACAATGTAAGTAAAAGCTTTCTAGACCAT
BS15689.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:27:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-RB | 897 | CG15728-PB | 1..897 | 17..913 | 4485 | 100 | Plus |
CG15728-RA | 897 | CG15728-PA | 1..897 | 17..913 | 4485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:27:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-RB | 1250 | CG15728-RB | 158..1058 | 17..917 | 4490 | 99.9 | Plus |
CG15728-RA | 1140 | CG15728-RA | 70..970 | 17..917 | 4490 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12627677..12628253 | 341..917 | 2870 | 99.8 | Plus |
X | 23542271 | X | 12627419..12627612 | 147..340 | 970 | 100 | Plus |
X | 23542271 | X | 12627233..12627364 | 17..148 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:27:37 has no hits.
BS15689.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:24 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 70..964 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:43 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 70..964 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:04 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 1..895 | 17..911 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:17 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 70..964 | 17..911 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:17 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12627233..12627364 | 17..148 | 100 | -> | Plus |
X | 12627421..12627612 | 149..340 | 100 | -> | Plus |
X | 12627677..12628247 | 341..911 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:43 Download gff for
BS15689.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12521266..12521397 | 17..148 | 100 | -> | Plus |
arm_X | 12521454..12521645 | 149..340 | 100 | -> | Plus |
arm_X | 12521710..12522280 | 341..911 | 100 | | Plus |
BS15689.3prime Sequence
824 bp (754 high quality bases) assembled on 2006-12-21
> BS15689.3prime
ATGGTCTAGAAAGCTTTTACTTTTATTGTGGTCCACTTTTGCCTTGGTAA
CACTTAACCAAATGGCCATGCAAGAGCTGCATAAGCTCACATATGGACTC
CAAAAGCACCAGGCGCTCATGCAGATGCCCCAAATCGTTGTTCTCCACCA
TCAGCGGACGCAGCTCATCAACGATCGCGATTAGCCAGCGAACTAATATC
GAACAATCGTCCCTGGCCAGTTTCATATAATCCTCCGGCACATCGGTCTC
CTGGCACAGTTGCTGGCCCTGGGCATTGAATGGTCCGATCAGCAGGATGC
TGGATATCAAACGGACCACCAGGTGCAGGGAATGCAAATAGGATATTACA
TAAATATGCGGCTTCACCACGGCAACGACGAGCAGCAGTGTGTTAGCCGG
ACGCAATCGGTGCAAGTCCAGGCCCAAGTCCGACATATGATCCAACATGG
CCCAGAGCAGACAGTTAGCCACAACGCTGGCCATTGTGCACAGCGGACTG
GCCACGCGGCAGCCGAGGATCAGGTTGAGCATTGTGCTCGAACTCTGGAT
ATCCAAGAGACCCAGGACATGGACGCATACCTGGTGGATATGGCTTTCCT
CGGAGCATGCCATATAATTGAAGCACTTTTGCAGGAAAAGAGTTCTTTTC
ACCTGGGTGGCCGACGTGTCCTCATGATGGAGTAGATAAACCATCAAACC
GCATACATACACCGCAGCCAGTTTATCTGCTCCGAATTGGATCCCCTCCT
GGTTGAGCAGTTCATCAAAACCAGATATAATCTCCAGAATATTGCCGGTG
GCATAAATAAAGTAGCATTGTTCC
BS15689.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-PA | 897 | CG15728-RA | 90..889 | 824..25 | 4000 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:57:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-RB | 1250 | CG15728-RB | 247..1058 | 824..13 | 4015 | 99.6 | Minus |
CG15728-RA | 1140 | CG15728-RA | 159..970 | 824..13 | 4015 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:57:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12627677..12628253 | 589..13 | 2840 | 99.5 | Minus |
X | 23542271 | X | 12627419..12627612 | 783..590 | 970 | 100 | Minus |
X | 23542271 | X | 12627322..12627364 | 824..782 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:57:10 has no hits.
BS15689.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:20 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-PA | 90..897 | 17..824 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:20 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-PA | 90..897 | 17..824 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:31:19 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 159..970 | 13..824 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:37 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 159..970 | 13..824 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:37 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12627322..12627364 | 782..824 | 100 | -> | Minus |
X | 12627421..12627612 | 590..781 | 100 | -> | Minus |
X | 12627677..12628253 | 13..589 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:31:19 Download gff for
BS15689.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12521355..12521397 | 782..824 | 100 | -> | Minus |
arm_X | 12521454..12521645 | 590..781 | 100 | -> | Minus |
arm_X | 12521710..12522286 | 13..589 | 99 | | Minus |
BS15689.5prime Sequence
873 bp (781 high quality bases) assembled on 2006-12-21
> BS15689.5prime
GAAGTTATCCTTCGACATGGCAGAATACAACATGAGCCACATGGTGCGAC
CCCAGGGATTCAGTTTGGAAGAGCTGCGTCAGACTATGAGTCGATCGGCG
ATTCGGGAACAATGCTACTTTATTTATGCCACCGGCAATATTCTGGAGAT
TATATCTGGTTTTGATGAACTGCTCAACCAGGAGGGGATCCAATTCGGAG
CAGATAAACTGGCTGCGGTGTATGTATGCGGTTTGATGGTTTATCTACTC
CATCATGAGGACACGTCGGCCACCCAGGTGAAAAGAACTCTTTTCCTGCA
AAAGTGCTTCAATTATATGGCATGCTCCGAGGAAAGCCATATCCACCAGG
TATGCGTCCATGTCCTGGGTCTCTTGGATATCCAGAGTTCGAGCACAATG
CTCAACCTGATCCTCGGCTGCCGCGTGGCCAGTCCGCTGTGCACAATGGC
CAGCGTTGTGGCTAACTGTCTGCTCTGGGCCATGTTGGATCATATGTCGG
ACTTGGGCCTGGACTTGCACCGATTGCGTCCGGCTAACACACTGCTGCTC
GTCGTTGCCGTGGTGAAGCCGCATATTTATGTAATATCCTATTTGCATTC
CCTGCACCTGGTGGTCCGTTTGATATCCAGCATCCTGCTGATCGGACCAT
TCAATGCCCAGGGCCAGCAACTGTGCCAGGAGACCGATGTGCCGGAGGAT
TATATGAAACTGGCCAGGGACGATTGTTCGATATTAGTTCGCTGGCTAAT
CGCGATCGTTGATGAGCTGCGTCCGCTGATGGTGGAGAACAACGATTTGG
GGCATCTGCATGAGCGCCTGGTGCTTTTGGAGTCCATATGTGAGCTTATG
CAGCTCTTGCATGGGCATTTTGG
BS15689.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-PA | 897 | CG15728-RA | 1..854 | 17..870 | 4245 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-RB | 1250 | CG15728-RB | 158..1011 | 17..870 | 4255 | 99.9 | Plus |
CG15728-RA | 1140 | CG15728-RA | 70..923 | 17..870 | 4255 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12627677..12628206 | 341..870 | 2635 | 99.8 | Plus |
X | 23542271 | X | 12627419..12627612 | 147..340 | 970 | 100 | Plus |
X | 23542271 | X | 12627233..12627364 | 17..148 | 660 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 11:41:45 has no hits.
BS15689.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:21 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-PA | 1..856 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:21 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-PA | 1..856 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 23:19:54 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 70..925 | 17..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:43 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15728-RA | 70..925 | 17..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:43 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12627421..12627612 | 149..340 | 100 | -> | Plus |
X | 12627233..12627364 | 17..148 | 100 | -> | Plus |
X | 12627677..12628208 | 341..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 23:19:54 Download gff for
BS15689.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 12521266..12521397 | 17..148 | 100 | -> | Plus |
arm_X | 12521454..12521645 | 149..340 | 100 | -> | Plus |
arm_X | 12521710..12522241 | 341..873 | 99 | | Plus |
BS15689.pep Sequence
Translation from 16 to 912
> BS15689.pep
MAEYNMSHMVRPQGFSLEELRQTMSRSAIREQCYFIYATGNILEIISGFD
ELLNQEGIQFGADKLAAVYVCGLMVYLLHHEDTSATQVKRTLFLQKCFNY
MACSEESHIHQVCVHVLGLLDIQSSSTMLNLILGCRVASPLCTMASVVAN
CLLWAMLDHMSDLGLDLHRLRPANTLLLVVAVVKPHIYVISYLHSLHLVV
RLISSILLIGPFNAQGQQLCQETDVPEDYMKLARDDCSILVRWLIAIVDE
LRPLMVENNDLGHLHERLVLLESICELMQLLHGHLVKCYQGKSGPQCK*
BS15689.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15728-PB | 298 | CG15728-PB | 1..298 | 1..298 | 1551 | 100 | Plus |
CG15728-PA | 298 | CG15728-PA | 1..298 | 1..298 | 1551 | 100 | Plus |