Clone BS15689 Report

Search the DGRC for BS15689

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:89
Vector:pDNR-Dual
Associated Gene/TranscriptCG15728-RA
Protein status:BS15689.pep: full length peptide match
Sequenced Size:929

Clone Sequence Records

BS15689.complete Sequence

929 bp assembled on 2010-02-09

GenBank Submission: KX801368

> BS15689.complete
GAAGTTATCAGTCGACATGGCAGAATACAACATGAGCCACATGGTGCGAC
CCCAGGGATTCAGTTTGGAAGAGCTGCGTCAGACTATGAGTCGATCGGCG
ATTCGGGAACAATGCTACTTTATTTATGCCACCGGCAATATTCTGGAGAT
TATATCTGGTTTTGATGAACTGCTCAACCAGGAGGGGATCCAATTCGGAG
CAGATAAACTGGCTGCGGTGTATGTATGCGGTTTGATGGTTTATCTACTC
CATCATGAGGACACGTCGGCCACCCAGGTGAAAAGAACTCTTTTCCTGCA
AAAGTGCTTCAATTATATGGCATGCTCCGAGGAAAGCCATATCCACCAGG
TATGCGTCCATGTCCTGGGTCTCTTGGATATCCAGAGTTCGAGCACAATG
CTCAACCTGATCCTCGGCTGCCGCGTGGCCAGTCCGCTGTGCACAATGGC
CAGCGTTGTGGCTAACTGTCTGCTCTGGGCCATGTTGGATCATATGTCGG
ACTTGGGCCTGGACTTGCACCGATTGCGTCCGGCTAACACACTGCTGCTC
GTCGTTGCCGTGGTGAAGCCGCATATTTATGTAATATCCTATTTGCATTC
CCTGCACCTGGTGGTCCGTTTGATATCCAGCATCCTGCTGATCGGACCAT
TCAATGCCCAGGGCCAGCAACTGTGCCAGGAGACCGATGTGCCGGAGGAT
TATATGAAACTGGCCAGGGACGATTGTTCGATATTAGTTCGCTGGCTAAT
CGCGATCGTTGATGAGCTGCGTCCGCTGATGGTGGAGAACAACGATTTGG
GGCATCTGCATGAGCGCCTGGTGCTTTTGGAGTCCATATGTGAGCTTATG
CAGCTCTTGCATGGCCATTTGGTTAAGTGTTACCAAGGCAAAAGTGGACC
ACAATGTAAGTAAAAGCTTTCTAGACCAT

BS15689.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-RB 897 CG15728-PB 1..897 17..913 4485 100 Plus
CG15728-RA 897 CG15728-PA 1..897 17..913 4485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-RB 1250 CG15728-RB 158..1058 17..917 4490 99.9 Plus
CG15728-RA 1140 CG15728-RA 70..970 17..917 4490 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12627677..12628253 341..917 2870 99.8 Plus
X 23542271 X 12627419..12627612 147..340 970 100 Plus
X 23542271 X 12627233..12627364 17..148 660 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:27:37 has no hits.

BS15689.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:24 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 70..964 17..911 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:43 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 70..964 17..911 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 17:53:04 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 1..895 17..911 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:29:17 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 70..964 17..911 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:29:17 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
X 12627233..12627364 17..148 100 -> Plus
X 12627421..12627612 149..340 100 -> Plus
X 12627677..12628247 341..911 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:43 Download gff for BS15689.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12521266..12521397 17..148 100 -> Plus
arm_X 12521454..12521645 149..340 100 -> Plus
arm_X 12521710..12522280 341..911 100   Plus

BS15689.3prime Sequence

824 bp (754 high quality bases) assembled on 2006-12-21

> BS15689.3prime
ATGGTCTAGAAAGCTTTTACTTTTATTGTGGTCCACTTTTGCCTTGGTAA
CACTTAACCAAATGGCCATGCAAGAGCTGCATAAGCTCACATATGGACTC
CAAAAGCACCAGGCGCTCATGCAGATGCCCCAAATCGTTGTTCTCCACCA
TCAGCGGACGCAGCTCATCAACGATCGCGATTAGCCAGCGAACTAATATC
GAACAATCGTCCCTGGCCAGTTTCATATAATCCTCCGGCACATCGGTCTC
CTGGCACAGTTGCTGGCCCTGGGCATTGAATGGTCCGATCAGCAGGATGC
TGGATATCAAACGGACCACCAGGTGCAGGGAATGCAAATAGGATATTACA
TAAATATGCGGCTTCACCACGGCAACGACGAGCAGCAGTGTGTTAGCCGG
ACGCAATCGGTGCAAGTCCAGGCCCAAGTCCGACATATGATCCAACATGG
CCCAGAGCAGACAGTTAGCCACAACGCTGGCCATTGTGCACAGCGGACTG
GCCACGCGGCAGCCGAGGATCAGGTTGAGCATTGTGCTCGAACTCTGGAT
ATCCAAGAGACCCAGGACATGGACGCATACCTGGTGGATATGGCTTTCCT
CGGAGCATGCCATATAATTGAAGCACTTTTGCAGGAAAAGAGTTCTTTTC
ACCTGGGTGGCCGACGTGTCCTCATGATGGAGTAGATAAACCATCAAACC
GCATACATACACCGCAGCCAGTTTATCTGCTCCGAATTGGATCCCCTCCT
GGTTGAGCAGTTCATCAAAACCAGATATAATCTCCAGAATATTGCCGGTG
GCATAAATAAAGTAGCATTGTTCC

BS15689.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-PA 897 CG15728-RA 90..889 824..25 4000 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-RB 1250 CG15728-RB 247..1058 824..13 4015 99.6 Minus
CG15728-RA 1140 CG15728-RA 159..970 824..13 4015 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:57:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12627677..12628253 589..13 2840 99.5 Minus
X 23542271 X 12627419..12627612 783..590 970 100 Minus
X 23542271 X 12627322..12627364 824..782 215 100 Minus
Blast to na_te.dros performed on 2015-02-12 16:57:10 has no hits.

BS15689.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:20 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-PA 90..897 17..824 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:20 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-PA 90..897 17..824 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:31:19 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 159..970 13..824 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:42:37 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 159..970 13..824 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:42:37 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12627322..12627364 782..824 100 -> Minus
X 12627421..12627612 590..781 100 -> Minus
X 12627677..12628253 13..589 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:31:19 Download gff for BS15689.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12521355..12521397 782..824 100 -> Minus
arm_X 12521454..12521645 590..781 100 -> Minus
arm_X 12521710..12522286 13..589 99   Minus

BS15689.5prime Sequence

873 bp (781 high quality bases) assembled on 2006-12-21

> BS15689.5prime
GAAGTTATCCTTCGACATGGCAGAATACAACATGAGCCACATGGTGCGAC
CCCAGGGATTCAGTTTGGAAGAGCTGCGTCAGACTATGAGTCGATCGGCG
ATTCGGGAACAATGCTACTTTATTTATGCCACCGGCAATATTCTGGAGAT
TATATCTGGTTTTGATGAACTGCTCAACCAGGAGGGGATCCAATTCGGAG
CAGATAAACTGGCTGCGGTGTATGTATGCGGTTTGATGGTTTATCTACTC
CATCATGAGGACACGTCGGCCACCCAGGTGAAAAGAACTCTTTTCCTGCA
AAAGTGCTTCAATTATATGGCATGCTCCGAGGAAAGCCATATCCACCAGG
TATGCGTCCATGTCCTGGGTCTCTTGGATATCCAGAGTTCGAGCACAATG
CTCAACCTGATCCTCGGCTGCCGCGTGGCCAGTCCGCTGTGCACAATGGC
CAGCGTTGTGGCTAACTGTCTGCTCTGGGCCATGTTGGATCATATGTCGG
ACTTGGGCCTGGACTTGCACCGATTGCGTCCGGCTAACACACTGCTGCTC
GTCGTTGCCGTGGTGAAGCCGCATATTTATGTAATATCCTATTTGCATTC
CCTGCACCTGGTGGTCCGTTTGATATCCAGCATCCTGCTGATCGGACCAT
TCAATGCCCAGGGCCAGCAACTGTGCCAGGAGACCGATGTGCCGGAGGAT
TATATGAAACTGGCCAGGGACGATTGTTCGATATTAGTTCGCTGGCTAAT
CGCGATCGTTGATGAGCTGCGTCCGCTGATGGTGGAGAACAACGATTTGG
GGCATCTGCATGAGCGCCTGGTGCTTTTGGAGTCCATATGTGAGCTTATG
CAGCTCTTGCATGGGCATTTTGG

BS15689.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-PA 897 CG15728-RA 1..854 17..870 4245 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-RB 1250 CG15728-RB 158..1011 17..870 4255 99.9 Plus
CG15728-RA 1140 CG15728-RA 70..923 17..870 4255 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12627677..12628206 341..870 2635 99.8 Plus
X 23542271 X 12627419..12627612 147..340 970 100 Plus
X 23542271 X 12627233..12627364 17..148 660 100 Plus
Blast to na_te.dros performed on 2015-02-12 11:41:45 has no hits.

BS15689.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:21 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-PA 1..856 17..873 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:21 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-PA 1..856 17..873 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 23:19:54 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 70..925 17..873 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:47:43 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15728-RA 70..925 17..873 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:47:43 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12627421..12627612 149..340 100 -> Plus
X 12627233..12627364 17..148 100 -> Plus
X 12627677..12628208 341..873 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 23:19:54 Download gff for BS15689.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 12521266..12521397 17..148 100 -> Plus
arm_X 12521454..12521645 149..340 100 -> Plus
arm_X 12521710..12522241 341..873 99   Plus

BS15689.pep Sequence

Translation from 16 to 912

> BS15689.pep
MAEYNMSHMVRPQGFSLEELRQTMSRSAIREQCYFIYATGNILEIISGFD
ELLNQEGIQFGADKLAAVYVCGLMVYLLHHEDTSATQVKRTLFLQKCFNY
MACSEESHIHQVCVHVLGLLDIQSSSTMLNLILGCRVASPLCTMASVVAN
CLLWAMLDHMSDLGLDLHRLRPANTLLLVVAVVKPHIYVISYLHSLHLVV
RLISSILLIGPFNAQGQQLCQETDVPEDYMKLARDDCSILVRWLIAIVDE
LRPLMVENNDLGHLHERLVLLESICELMQLLHGHLVKCYQGKSGPQCK*

BS15689.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15728-PB 298 CG15728-PB 1..298 1..298 1551 100 Plus
CG15728-PA 298 CG15728-PA 1..298 1..298 1551 100 Plus