Clone Sequence Records
BS15690.complete Sequence
968 bp assembled on 2010-02-09
GenBank Submission: KX806550
> BS15690.complete
GAAGTTATCAGTCGACATGTCACCGCAAATCCGTCCACTTACGCCAGAGC
TGCAAAAAGTTGCCAAGGAGCAGCTCAAGGAGGATCCCGAACGTCTCGAA
GCCGATCTGCAGGCGTTTAAGACATGGATCGAGCAGCAGCCGCATCTAAA
TCCCCGAATGGATGATCAGTTTCTGGTGGCTTTCTTGCGCGGCTGCAAGT
ACAGTTTGGAGCGGGCCAAGTCCAAGTTAGATAAGTACTACACGCTGAAG
ACCAAGTATCCGGACTATTTCCGAGTTACCAACACCACGGATAGCAAGTT
CCGGGAGATTCATCAAACGGGTGCCATCATCTACCTGCCCACTCCGCTGA
ATGAAAATGGACCTCGCATCGGGATCTGGCGCATGGGATTGGTGCCAGTG
GAGAAGTACACAATGCTGGAGTGCATGCAAGTGGCCCAGGCAATGCAGGA
GATTGCCATTTTGGAGGACGACTACGCCAATGTCAATGGAGTAGTTTTCA
TTATGGACATGAAGGGTGCCACCGCCGCACACTTGTTCCAGATGACGCCG
TCGATGGCCAAGAAATTCACTGTCTTCTCGGAGGAGGCACTTCCACTGCG
TCTGAAGGCACAGCATTTCATCAACACCATCACCGGATTCGAGCAGCTGT
TCAACATGTTCAAGCCAATGATGTCCAAGAAAATGCAGTCTCGCCTATTT
GTGCACGGCAACAAAATGGGGCTCTTGACGGAGCAGATTCCACTGAAATA
TCTGCCCGAGGAATACGGCGGCGAGAATGGCACCACGCAGGACATCGTGG
CCGCCATGGAGAAGAAGTTGGACGAGTACGCCGATTTCTTCCAGGAAAAT
GTGAACTTCGGCACCGACGAGAGCCTGCGTCCCGGAAAACCAATCGATTT
TGAGGGGCTTTTCGGAGTAGAAGGTTCCTTTAGAAAGCTCAACGTGGACT
AGAAGCTTTCTAGACCAT
BS15690.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:59:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-RA | 936 | CG33514-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:59:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-RA | 1179 | CG33514-RA | 63..998 | 17..952 | 4680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:59:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4365859..4366490 | 321..952 | 3160 | 100 | Plus |
3L | 28110227 | 3L | 4365496..4365800 | 17..321 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:59:18 has no hits.
BS15690.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:51 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 1..936 | 17..952 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:26:03 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 63..998 | 17..952 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:51 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 1..936 | 17..952 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:42 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 63..998 | 17..952 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:42 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4365496..4365800 | 17..321 | 100 | -> | Plus |
3L | 4365860..4366490 | 322..952 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:26:03 Download gff for
BS15690.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4365496..4365800 | 17..321 | 100 | -> | Plus |
arm_3L | 4365860..4366490 | 322..952 | 100 | | Plus |
BS15690.3prime Sequence
809 bp (759 high quality bases) assembled on 2006-12-21
> BS15690.3prime
ATGGTCTAGAAAGCTTCTACTCTACGTTGAGCTTTCTAAAGGAACCTTCT
ACTCCGAAAAGCCCCTCAAAATCGATTGGTTTTCCGGGACGCAGGCTCTC
GTCGGTGCCGAAGTTCACATTTTCCTGGAAGAAATCGGCGTACTCGTCCA
ACTTCTTCTCCATGGCGGCCACGATGTCCTGCGTGGTGCCATTCTCGCCG
CCGTATTCCTCGGGCAGATATTTCAGTGGAATCTGCTCCGTCAAGAGCCC
CATTTTGTTGCCGTGCACAAATAGGCGAGACTGCATTTTCTTGGACATCA
TTGGCTTGAACATGTTGAACAGCTGCTCGAATCCGGTGATGGTGTTGATG
AAATGCTGTGCCTTCAGACGCAGTGGAAGTGCCTCCTCCGAGAAGACAGT
GAATTTCTTGGCCATCGACGGCGTCATCTGGAACAAGTGTGCGGCGGTGG
CACCCTTCATGTCCATAATGAAAACTACTCCATTGACATTGGCGTAGTCG
TCCTCCAAAATGGCAATCTCCTGCATTGCCTGGGCCACTTGCATGCACTC
CAGCATTGTGTACTTCTCCACTGGCACCAATCCCATGCGCCAGATCCCGA
TGCGAGGTCCATTTTCATTCAGCGGAGTGGGCAGGTAGATGATGGCACCC
GTTTGATGAATCTCCCGGAACTTGCTATCCGTGGTGTTGGTAACTCGGAA
ATAGTCCGGATACTTGGTCTTCAGCGTGTAGTACTTATCTAACTTGGACT
TGGCCCGCTCCAAACTGTACTTGCAGCCGCGCAAGAAAGCCACCAGAAAC
TGATCATCC
BS15690.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-PA | 936 | CG33514-RA | 144..929 | 809..24 | 3930 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 23:57:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-RA | 1179 | CG33514-RA | 206..998 | 809..17 | 3935 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 23:57:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4365859..4366490 | 648..17 | 3130 | 99.7 | Minus |
3L | 28110227 | 3L | 4365639..4365800 | 809..648 | 810 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-05 23:57:10 has no hits.
BS15690.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:22 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-PA | 144..936 | 17..809 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:23 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-PA | 144..936 | 17..809 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:33:40 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 206..998 | 17..809 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:34:11 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 206..998 | 17..809 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:34:11 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4365639..4365800 | 648..809 | 100 | -> | Minus |
3L | 4365860..4366490 | 17..647 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:33:40 Download gff for
BS15690.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4365639..4365800 | 648..809 | 100 | -> | Minus |
arm_3L | 4365860..4366490 | 17..647 | 99 | | Minus |
BS15690.5prime Sequence
880 bp (785 high quality bases) assembled on 2006-12-21
> BS15690.5prime
GAAGTTATCCTTCGACATGTCACCGCAAATCCGTCCACTTACGCCAGAGC
TGCAAAAAGTTGCCAAGGAGCAGCTCAAGGAGGATCCCGAACGTCTCGAA
GCCGATCTGCAGGCGTTTAAGACATGGATCGAGCAGCAGCCGCATCTAAA
TCCCCGAATGGATGATCAGTTTCTGGTGGCTTTCTTGCGCGGCTGCAAGT
ACAGTTTGGAGCGGGCCAAGTCCAAGTTAGATAAGTACTACACGCTGAAG
ACCAAGTATCCGGACTATTTCCGAGTTACCAACACCACGGATAGCAAGTT
CCGGGAGATTCATCAAACGGGTGCCATCATCTACCTGCCCACTCCGCTGA
ATGAAAATGGACCTCGCATCGGGATCTGGCGCATGGGATTGGTGCCAGTG
GAGAAGTACACAATGCTGGAGTGCATGCAAGTGGCCCAGGCAATGCAGGA
GATTGCCATTTTGGAGGACGACTACGCCAATGTCAATGGAGTAGTTTTCA
TTATGGACATGAAGGGTGCCACCGCCGCACACTTGTTCCAGATGACGCCG
TCGATGGCCAAGAAATTCACTGTCTTCTCGGAGGAGGCACTTCCACTGCG
TCTGAAGGCACAGCATTTCATCAACACCATCACCGGATTCGAGCAGCTGT
TCAACATGTTCAAGCCAATGATGTCCAAGAAAATGCAGTCTCGCCTATTT
GTGCACGGCAACAAAATGGGGCTCTTGACGGAGCAGATTCCACTGAAATA
TCTGCCCGAGGAATACGGCGGCGAGAATGGCACCACGCAGGACATCGTGG
CCGCCATGGAGAAGAAGTTGGACGAGTACGCCGATTTCTTCCAGGAAAAT
GTGAACTTCGGCACCGACGAGAGCCTGCGT
BS15690.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-PA | 936 | CG33514-RA | 1..864 | 17..880 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 02:51:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-RA | 1179 | CG33514-RA | 63..926 | 17..880 | 4320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 02:51:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4365859..4366418 | 321..880 | 2800 | 100 | Plus |
3L | 28110227 | 3L | 4365496..4365800 | 17..321 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 02:51:17 has no hits.
BS15690.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:23 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-PA | 1..864 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:25 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-PA | 1..864 | 17..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 05:29:04 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 56..926 | 9..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:05:30 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33514-RA | 56..926 | 9..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 04:05:30 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4365489..4365800 | 9..321 | 99 | -> | Plus |
3L | 4365860..4366418 | 322..880 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:29:04 Download gff for
BS15690.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4365489..4365800 | 9..321 | 99 | -> | Plus |
arm_3L | 4365860..4366418 | 322..880 | 100 | | Plus |
BS15690.pep Sequence
Translation from 16 to 951
> BS15690.pep
MSPQIRPLTPELQKVAKEQLKEDPERLEADLQAFKTWIEQQPHLNPRMDD
QFLVAFLRGCKYSLERAKSKLDKYYTLKTKYPDYFRVTNTTDSKFREIHQ
TGAIIYLPTPLNENGPRIGIWRMGLVPVEKYTMLECMQVAQAMQEIAILE
DDYANVNGVVFIMDMKGATAAHLFQMTPSMAKKFTVFSEEALPLRLKAQH
FINTITGFEQLFNMFKPMMSKKMQSRLFVHGNKMGLLTEQIPLKYLPEEY
GGENGTTQDIVAAMEKKLDEYADFFQENVNFGTDESLRPGKPIDFEGLFG
VEGSFRKLNVD*
BS15690.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33514-PA | 311 | CG33514-PA | 1..311 | 1..311 | 1626 | 100 | Plus |
CG33966-PA | 310 | CG33966-PA | 2..310 | 3..311 | 916 | 55.3 | Plus |
CG12926-PA | 313 | CG12926-PA | 6..313 | 2..311 | 706 | 45.2 | Plus |
CG30339-PA | 308 | CG30339-PA | 4..308 | 5..311 | 644 | 42.3 | Plus |
CG31636-PB | 313 | CG31636-PB | 4..313 | 5..311 | 612 | 40.5 | Plus |