Clone BS15690 Report

Search the DGRC for BS15690

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:156
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG33514-RA
Protein status:BS15690.pep: full length peptide match
Sequenced Size:968

Clone Sequence Records

BS15690.complete Sequence

968 bp assembled on 2010-02-09

GenBank Submission: KX806550

> BS15690.complete
GAAGTTATCAGTCGACATGTCACCGCAAATCCGTCCACTTACGCCAGAGC
TGCAAAAAGTTGCCAAGGAGCAGCTCAAGGAGGATCCCGAACGTCTCGAA
GCCGATCTGCAGGCGTTTAAGACATGGATCGAGCAGCAGCCGCATCTAAA
TCCCCGAATGGATGATCAGTTTCTGGTGGCTTTCTTGCGCGGCTGCAAGT
ACAGTTTGGAGCGGGCCAAGTCCAAGTTAGATAAGTACTACACGCTGAAG
ACCAAGTATCCGGACTATTTCCGAGTTACCAACACCACGGATAGCAAGTT
CCGGGAGATTCATCAAACGGGTGCCATCATCTACCTGCCCACTCCGCTGA
ATGAAAATGGACCTCGCATCGGGATCTGGCGCATGGGATTGGTGCCAGTG
GAGAAGTACACAATGCTGGAGTGCATGCAAGTGGCCCAGGCAATGCAGGA
GATTGCCATTTTGGAGGACGACTACGCCAATGTCAATGGAGTAGTTTTCA
TTATGGACATGAAGGGTGCCACCGCCGCACACTTGTTCCAGATGACGCCG
TCGATGGCCAAGAAATTCACTGTCTTCTCGGAGGAGGCACTTCCACTGCG
TCTGAAGGCACAGCATTTCATCAACACCATCACCGGATTCGAGCAGCTGT
TCAACATGTTCAAGCCAATGATGTCCAAGAAAATGCAGTCTCGCCTATTT
GTGCACGGCAACAAAATGGGGCTCTTGACGGAGCAGATTCCACTGAAATA
TCTGCCCGAGGAATACGGCGGCGAGAATGGCACCACGCAGGACATCGTGG
CCGCCATGGAGAAGAAGTTGGACGAGTACGCCGATTTCTTCCAGGAAAAT
GTGAACTTCGGCACCGACGAGAGCCTGCGTCCCGGAAAACCAATCGATTT
TGAGGGGCTTTTCGGAGTAGAAGGTTCCTTTAGAAAGCTCAACGTGGACT
AGAAGCTTTCTAGACCAT

BS15690.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:59:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-RA 936 CG33514-PA 1..936 17..952 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-RA 1179 CG33514-RA 63..998 17..952 4680 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4365859..4366490 321..952 3160 100 Plus
3L 28110227 3L 4365496..4365800 17..321 1525 100 Plus
Blast to na_te.dros performed on 2014-11-27 12:59:18 has no hits.

BS15690.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:10:51 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 1..936 17..952 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:26:03 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 63..998 17..952 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:07:51 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 1..936 17..952 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:42 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 63..998 17..952 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:42 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4365496..4365800 17..321 100 -> Plus
3L 4365860..4366490 322..952 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:26:03 Download gff for BS15690.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4365496..4365800 17..321 100 -> Plus
arm_3L 4365860..4366490 322..952 100   Plus

BS15690.3prime Sequence

809 bp (759 high quality bases) assembled on 2006-12-21

> BS15690.3prime
ATGGTCTAGAAAGCTTCTACTCTACGTTGAGCTTTCTAAAGGAACCTTCT
ACTCCGAAAAGCCCCTCAAAATCGATTGGTTTTCCGGGACGCAGGCTCTC
GTCGGTGCCGAAGTTCACATTTTCCTGGAAGAAATCGGCGTACTCGTCCA
ACTTCTTCTCCATGGCGGCCACGATGTCCTGCGTGGTGCCATTCTCGCCG
CCGTATTCCTCGGGCAGATATTTCAGTGGAATCTGCTCCGTCAAGAGCCC
CATTTTGTTGCCGTGCACAAATAGGCGAGACTGCATTTTCTTGGACATCA
TTGGCTTGAACATGTTGAACAGCTGCTCGAATCCGGTGATGGTGTTGATG
AAATGCTGTGCCTTCAGACGCAGTGGAAGTGCCTCCTCCGAGAAGACAGT
GAATTTCTTGGCCATCGACGGCGTCATCTGGAACAAGTGTGCGGCGGTGG
CACCCTTCATGTCCATAATGAAAACTACTCCATTGACATTGGCGTAGTCG
TCCTCCAAAATGGCAATCTCCTGCATTGCCTGGGCCACTTGCATGCACTC
CAGCATTGTGTACTTCTCCACTGGCACCAATCCCATGCGCCAGATCCCGA
TGCGAGGTCCATTTTCATTCAGCGGAGTGGGCAGGTAGATGATGGCACCC
GTTTGATGAATCTCCCGGAACTTGCTATCCGTGGTGTTGGTAACTCGGAA
ATAGTCCGGATACTTGGTCTTCAGCGTGTAGTACTTATCTAACTTGGACT
TGGCCCGCTCCAAACTGTACTTGCAGCCGCGCAAGAAAGCCACCAGAAAC
TGATCATCC

BS15690.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-PA 936 CG33514-RA 144..929 809..24 3930 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-05 23:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-RA 1179 CG33514-RA 206..998 809..17 3935 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-05 23:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4365859..4366490 648..17 3130 99.7 Minus
3L 28110227 3L 4365639..4365800 809..648 810 100 Minus
Blast to na_te.dros performed on 2015-02-05 23:57:10 has no hits.

BS15690.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:22 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-PA 144..936 17..809 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:23 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-PA 144..936 17..809 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 03:33:40 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 206..998 17..809 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-06 00:34:11 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 206..998 17..809 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-06 00:34:11 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 4365639..4365800 648..809 100 -> Minus
3L 4365860..4366490 17..647 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 03:33:40 Download gff for BS15690.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4365639..4365800 648..809 100 -> Minus
arm_3L 4365860..4366490 17..647 99   Minus

BS15690.5prime Sequence

880 bp (785 high quality bases) assembled on 2006-12-21

> BS15690.5prime
GAAGTTATCCTTCGACATGTCACCGCAAATCCGTCCACTTACGCCAGAGC
TGCAAAAAGTTGCCAAGGAGCAGCTCAAGGAGGATCCCGAACGTCTCGAA
GCCGATCTGCAGGCGTTTAAGACATGGATCGAGCAGCAGCCGCATCTAAA
TCCCCGAATGGATGATCAGTTTCTGGTGGCTTTCTTGCGCGGCTGCAAGT
ACAGTTTGGAGCGGGCCAAGTCCAAGTTAGATAAGTACTACACGCTGAAG
ACCAAGTATCCGGACTATTTCCGAGTTACCAACACCACGGATAGCAAGTT
CCGGGAGATTCATCAAACGGGTGCCATCATCTACCTGCCCACTCCGCTGA
ATGAAAATGGACCTCGCATCGGGATCTGGCGCATGGGATTGGTGCCAGTG
GAGAAGTACACAATGCTGGAGTGCATGCAAGTGGCCCAGGCAATGCAGGA
GATTGCCATTTTGGAGGACGACTACGCCAATGTCAATGGAGTAGTTTTCA
TTATGGACATGAAGGGTGCCACCGCCGCACACTTGTTCCAGATGACGCCG
TCGATGGCCAAGAAATTCACTGTCTTCTCGGAGGAGGCACTTCCACTGCG
TCTGAAGGCACAGCATTTCATCAACACCATCACCGGATTCGAGCAGCTGT
TCAACATGTTCAAGCCAATGATGTCCAAGAAAATGCAGTCTCGCCTATTT
GTGCACGGCAACAAAATGGGGCTCTTGACGGAGCAGATTCCACTGAAATA
TCTGCCCGAGGAATACGGCGGCGAGAATGGCACCACGCAGGACATCGTGG
CCGCCATGGAGAAGAAGTTGGACGAGTACGCCGATTTCTTCCAGGAAAAT
GTGAACTTCGGCACCGACGAGAGCCTGCGT

BS15690.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-PA 936 CG33514-RA 1..864 17..880 4320 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 02:51:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-RA 1179 CG33514-RA 63..926 17..880 4320 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 02:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4365859..4366418 321..880 2800 100 Plus
3L 28110227 3L 4365496..4365800 17..321 1525 100 Plus
Blast to na_te.dros performed on 2015-01-30 02:51:17 has no hits.

BS15690.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:23 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-PA 1..864 17..880 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:25 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-PA 1..864 17..880 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 05:29:04 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 56..926 9..880 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:05:30 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33514-RA 56..926 9..880 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 04:05:30 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4365489..4365800 9..321 99 -> Plus
3L 4365860..4366418 322..880 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:29:04 Download gff for BS15690.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4365489..4365800 9..321 99 -> Plus
arm_3L 4365860..4366418 322..880 100   Plus

BS15690.pep Sequence

Translation from 16 to 951

> BS15690.pep
MSPQIRPLTPELQKVAKEQLKEDPERLEADLQAFKTWIEQQPHLNPRMDD
QFLVAFLRGCKYSLERAKSKLDKYYTLKTKYPDYFRVTNTTDSKFREIHQ
TGAIIYLPTPLNENGPRIGIWRMGLVPVEKYTMLECMQVAQAMQEIAILE
DDYANVNGVVFIMDMKGATAAHLFQMTPSMAKKFTVFSEEALPLRLKAQH
FINTITGFEQLFNMFKPMMSKKMQSRLFVHGNKMGLLTEQIPLKYLPEEY
GGENGTTQDIVAAMEKKLDEYADFFQENVNFGTDESLRPGKPIDFEGLFG
VEGSFRKLNVD*

BS15690.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:11:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG33514-PA 311 CG33514-PA 1..311 1..311 1626 100 Plus
CG33966-PA 310 CG33966-PA 2..310 3..311 916 55.3 Plus
CG12926-PA 313 CG12926-PA 6..313 2..311 706 45.2 Plus
CG30339-PA 308 CG30339-PA 4..308 5..311 644 42.3 Plus
CG31636-PB 313 CG31636-PB 4..313 5..311 612 40.5 Plus