Clone Sequence Records
BS15692.3prime Sequence
831 bp (808 high quality bases) assembled on 2006-12-21
> BS15692.3prime
ATGGTCTAGAAAGCTTTTACCTTTCCGCATTAAGTACGGGATACACGAAG
GTATCGGCGGTATCCTTTCCGACGACGTTGCGGGCTATGCACTTGTAGTT
GCCCATATCCTCCCACTTGATCTCGGAGATCAGAAGATCGCCGTTGGCCA
GCACCCTGTGGCGATGTCCTTGGACGATCTCCTTGTTCTCGTTATTCAAC
CAGGTGATCTCGGCGCGGGGACGGGCGTGCACGCGGCAGGGCAGCTGAAT
GTTGGAGCCCATGAGGTCCAGATGCGTCTTCTCGGTGTAGATGATTCGCG
GTTTCTGGGCACCCGGGTAGGTCTTCTCCGGCGTCAGACGAGAGGAGCGA
GGAGGATGCACCACAGTGCTGGCATAGATGGTCTTGGAGCCAGTGCGTCC
CACACACGTGTAGGTGCGGGCCTCGCTCAGCACGTGGTCGATGATATGCG
ACGATCGGACGCGCACAATGGCACTGGGCGCCTCTTCGGCAACCTGGTTG
GAGTCCAGATCATCGAGCTCCGAGCGGGGCAGGTGACCCACCACCCACTG
GATGCTGGGCACTTGGGAGCCCATCATCTCGCAAACGATCTCGATGGTGG
CTCCATCGGCCTGCTGCAGCTTCGTCGGCGGCGTCTTGGTGAACTTGAGC
CAGTCGGCTTCGAAGGCTCGGTTGCGTGGCTTCTCCTCCTCCGCCTCGAT
GGAGTTATCCACGTCGTTGCTATCGTCTACCAGGTCCACGGCTCTTCCGC
GGACAGTGGCGATGCTGCCGAACAGCAGCAGCGCTAAGGCGCACACATGT
AAATTCATTTTCTGCATGTCGACTGATAACT
BS15692.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15009-PA | 801 | ImpL2-RA | 1..790 | 817..28 | 3950 | 100 | Minus |
| CG15009-PC | 804 | ImpL2-RC | 9..793 | 812..28 | 3925 | 100 | Minus |
| CG15009-PB | 792 | ImpL2-RB | 1..781 | 808..28 | 3905 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:21:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1034 | 817..23 | 3960 | 99.9 | Minus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1518 | 812..23 | 3935 | 99.9 | Minus |
| ImpL2-RC | 989 | CG15009-RC | 67..856 | 812..23 | 3935 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 32..816 | 3925 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:21:01 has no hits.
BS15692.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:26 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..817 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:30 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 13:14:47 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1041 | 16..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:33:07 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1041 | 16..817 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:33:07 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225718 | 32..822 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 13:14:47 Download gff for
BS15692.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225718 | 32..822 | 99 | | Plus |
BS15692.5prime Sequence
826 bp (809 high quality bases) assembled on 2006-12-21
> BS15692.5prime
GAAGTTATCCTTTGACATGCAGAAAATGAATTTACATGTGTGCGCCTTAG
CGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGAC
CTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGA
GAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGA
CGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTT
TGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCA
CCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAG
AGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCAC
GTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAA
GACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGA
CGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACC
GAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCG
CGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACA
AGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTT
CTGATCTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGC
CCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTAC
TTAATGAGGAAGACTAAAAGCTTTCT
BS15692.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15009-PA | 801 | ImpL2-RA | 1..801 | 17..817 | 4005 | 100 | Plus |
| CG15009-PC | 804 | ImpL2-RC | 9..804 | 22..817 | 3980 | 100 | Plus |
| CG15009-PB | 792 | ImpL2-RB | 1..792 | 26..817 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1041 | 17..818 | 4010 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1525 | 22..818 | 3985 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 67..863 | 22..818 | 3985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 802..18 | 3925 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 14:59:35 has no hits.
BS15692.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:27 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:31 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15009-PA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:23:07 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1047 | 17..826 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:48:48 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1047 | 17..826 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:48:48 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225711 | 18..802 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:23:07 Download gff for
BS15692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225711 | 18..802 | 100 | | Minus |
BS15692.complete Sequence
833 bp assembled on 2006-11-29
GenBank Submission: FJ637946
> BS15692.complete
GAAGTTATCAGTCGACATGCAGAAAATGAATTTACATGTGTGCGCCTTAG
CGCTGCTGCTGTTCGGCAGCATCGCCACTGTCCGCGGAAGAGCCGTGGAC
CTGGTAGACGATAGCAACGACGTGGATAACTCCATCGAGGCGGAGGAGGA
GAAGCCACGCAACCGAGCCTTCGAAGCCGACTGGCTCAAGTTCACCAAGA
CGCCGCCGACGAAGCTGCAGCAGGCCGATGGAGCCACCATCGAGATCGTT
TGCGAGATGATGGGCTCCCAAGTGCCCAGCATCCAGTGGGTGGTGGGTCA
CCTGCCCCGCTCGGAGCTCGATGATCTGGACTCCAACCAGGTTGCCGAAG
AGGCGCCCAGTGCCATTGTGCGCGTCCGATCGTCGCATATCATCGACCAC
GTGCTGAGCGAGGCCCGCACCTACACGTGTGTGGGACGCACTGGCTCCAA
GACCATCTATGCCAGCACTGTGGTGCATCCTCCTCGCTCCTCTCGTCTGA
CGCCGGAGAAGACCTACCCGGGTGCCCAGAAACCGCGAATCATCTACACC
GAGAAGACGCATCTGGACCTCATGGGCTCCAACATTCAGCTGCCCTGCCG
CGTGCACGCCCGTCCCCGCGCCGAGATCACCTGGTTGAATAACGAGAACA
AGGAGATCGTCCAAGGACATCGCCACAGGGTGCTGGCCAACGGCGATCTT
CTGATCTCCGAGATCAAGTGGGAGGATATGGGCAACTACAAGTGCATAGC
CCGCAACGTCGTCGGAAAGGATACCGCCGATACCTTCGTGTATCCCGTAC
TTAATGAGGAAGACTAAAAGCTTTCTAGACCAT
BS15692.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 801 | CG15009-PA | 1..801 | 17..817 | 4005 | 100 | Plus |
| ImpL2-RC | 804 | CG15009-PC | 9..804 | 22..817 | 3980 | 100 | Plus |
| ImpL2-RD | 792 | CG15009-PD | 1..792 | 26..817 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-RA | 1167 | CG15009-RA | 240..1041 | 17..818 | 4010 | 100 | Plus |
| ImpL2-RD | 2355 | CG15009-RD | 729..1525 | 22..818 | 3985 | 100 | Plus |
| ImpL2-RC | 989 | CG15009-RC | 67..863 | 22..818 | 3985 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4224927..4225711 | 802..18 | 3925 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:04:21 has no hits.
BS15692.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:24:17 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 1..801 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:35 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:48:24 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1038 | 17..815 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:24:17 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1048 | 17..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:10:24 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpL2-RA | 240..1038 | 17..815 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:10:24 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4224927..4225711 | 17..802 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:48:24 Download gff for
BS15692.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4224927..4225711 | 17..802 | 99 | | Minus |
BS15692.pep Sequence
Translation from 16 to 816
> BS15692.pep
MQKMNLHVCALALLLFGSIATVRGRAVDLVDDSNDVDNSIEAEEEKPRNR
AFEADWLKFTKTPPTKLQQADGATIEIVCEMMGSQVPSIQWVVGHLPRSE
LDDLDSNQVAEEAPSAIVRVRSSHIIDHVLSEARTYTCVGRTGSKTIYAS
TVVHPPRSSRLTPEKTYPGAQKPRIIYTEKTHLDLMGSNIQLPCRVHARP
RAEITWLNNENKEIVQGHRHRVLANGDLLISEIKWEDMGNYKCIARNVVG
KDTADTFVYPVLNEED*
BS15692.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpL2-PA | 266 | CG15009-PA | 1..266 | 1..266 | 1390 | 100 | Plus |
| ImpL2-PC | 267 | CG15009-PC | 4..267 | 3..266 | 1380 | 100 | Plus |
| ImpL2-PD | 263 | CG15009-PD | 1..263 | 4..266 | 1375 | 100 | Plus |
| ImpL2-PB | 263 | CG15009-PB | 1..263 | 4..266 | 1375 | 100 | Plus |
| Nrg-PH | 1239 | CG1634-PH | 341..512 | 59..255 | 152 | 26.7 | Plus |
