Clone Sequence Records
BS15694.3prime Sequence
798 bp (764 high quality bases) assembled on 2006-12-21
> BS15694.3prime
ATGGTCTAGAAAGCTTTTACCTTCTGAAAGTGGCGGGGTTGCAACAGAAC
GAAAAGCCAGCCTGTGCCGTGTTGACCAATGCCACTGGGCAATTCTCGGG
CTGACAAAAGTTGGGAGCAGCTGGACGTTGACGTGCGTAGATGTTGTTCA
GGGTGAGGAAGGCCACGATGGGCTGGTTGTTGGCGTTCCGCACTATCTTG
TACATCCACTGGGGCACCGGGTTCCTGTTGCCACTTAGGAAGACATTCTT
GGGTCTATTGCCCGATGGCAGCGAGAGTACGCCCCTGGCCCCGGTGCGCA
CATTCACAAAGTTGTTTCCGGTCACCGAATTACGAACGAATCGCTCGATG
GTCTCCCAGTTGCCATCGTTGATGCTCTTGAACTGCGGCACTGCATTCAC
ATACTTGAAGGTGGCGCACAATTGGTCACCAAAGAAGAAGTCGGCCGAGG
CGGCCAGATGTCCGCGATTGATGATCACATCGCGGTTGTTCGGTATATAG
TTCTGATTGTTGCCAAACAGCCTCCTAAAGGTGCCGTGGATATTTCGGAC
CGTATAGCTAGCTTCATCCGCGCCACTGATCACTCCATCCGAACTAAATT
GGACACAGGGTCGGGTGATATAGAAGGGCTTTCCATACACCCGGTGTTCC
ACGAAGATAGCCCTCACAGCTCTGGTATCGAAGCAGGCGCGATAGAGCTC
CAGGAACTGGTTGTTGCCCACGTTGTAGCCCACCCGGTACATGGTGGCCG
GACATCTGCGATCTTGGACCGGTGTGGTGATGGCCGCCGGAACAGCGC
BS15694.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:25:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-PB | 1041 | CG14062-RB | 260..1034 | 798..24 | 3825 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:22:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-RB | 1180 | CG14062-RB | 263..1037 | 798..24 | 3845 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 09:22:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28641728..28642325 | 24..621 | 2975 | 99.8 | Plus |
3R | 32079331 | 3R | 28642396..28642572 | 622..798 | 870 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-02-11 09:22:21 has no hits.
BS15694.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:30 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-PB | 260..1041 | 17..798 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:36 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-PB | 260..1041 | 17..798 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 13:15:02 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 263..1044 | 17..798 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 11:37:17 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 263..1044 | 17..798 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 11:37:17 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28641721..28642325 | 17..621 | 99 | <- | Plus |
3R | 28642396..28642572 | 622..798 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 13:15:02 Download gff for
BS15694.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24467443..24468047 | 17..621 | 99 | <- | Plus |
arm_3R | 24468118..24468294 | 622..798 | 99 | | Plus |
BS15694.5prime Sequence
840 bp (809 high quality bases) assembled on 2006-12-21
> BS15694.5prime
GAAGTTATCCTTCGACATGTTGCGAATTCTACTTCTGCTACTGGCATTCT
GTGCCTTGGCACATGGACAGTGCCGATTCACCAGAGCTCAAGTGCAAGGG
ACCAATCGGATCTTTATGGTGCGTGGTCAGAACCGCCAGCTGTCCCTTAA
GCGAACAGCCAGTTCGGCGGTTGGCGAAACCCTGCAGATGTGGTGCAATC
CCCGGGACATAGTGGCCACCACCTGCCAGGCGGGAAGGGTTCCAGCCTTC
CAGCCACCCTTGCCCATGACCTGCCGCGCTGCTCCGGCGGCCATCACCAC
ACCGGTCCAAGATCGCAGATGTCCGGCCACCATGTACCGGGTGGGCTACA
ACGTGGGCAACAACCAGTTCCTGGAGCTCTATCGCGCCTGCTTCGATACC
AGAGCTGTGAGGGCTATCTTCGTGGAACACCGGGTGTATGGAAAGCCCTT
CTATATCACCCGACCCTGTGTCCAATTTAGTTCGGATGGAGTGATCAGTG
GCGCGGATGAAGCTAGCTATACGGTCCGAAATATCCACGGCACCTTTAGG
AGGCTGTTTGGCAACAATCAGAACTATATACCGAACAACCGCGATGTGAT
CATCAATCGCGGACATCTGGCCGCCTCGGCCGACTTCTTCTTTGGTGACC
AATTGTGCGCCACCTTCAAGTATGTGAATGCAGTGCCGCAGTTCAAGAGC
ATCAACGATGGCAACTGGGAGACCATCGAGCGATTCGTTCGTAATTCGGT
GACCGGAAACAACTTTGTGAATGTGCGCACCGGGGCCAGGGGCGTACTCT
CGCTGCCATCGGGCATAGACCCAAGAATGTCTTCCTAAGT
BS15694.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-PB | 1041 | CG14062-RB | 1..799 | 17..815 | 3995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:02:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-RB | 1180 | CG14062-RB | 4..828 | 17..840 | 4100 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:02:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28642396..28642789 | 452..59 | 1970 | 100 | Minus |
3R | 32079331 | 3R | 28641937..28642325 | 840..453 | 1895 | 99.7 | Minus |
3R | 32079331 | 3R | 28642846..28642888 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:02:52 has no hits.
BS15694.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:34:31 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-PB | 1..825 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:13:37 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-PB | 1..825 | 17..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:23:49 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 1..828 | 14..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:18 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 1..828 | 14..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:18 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28641937..28642325 | 453..840 | 99 | <- | Minus |
3R | 28642396..28642788 | 60..452 | 100 | <- | Minus |
3R | 28642846..28642905 | 3..59 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:23:49 Download gff for
BS15694.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24468568..24468627 | 3..59 | 91 | | Minus |
arm_3R | 24467659..24468047 | 453..840 | 99 | <- | Minus |
arm_3R | 24468118..24468510 | 60..452 | 100 | <- | Minus |
BS15694.complete Sequence
1073 bp assembled on 2012-04-25
GenBank Submission: KX803025
> BS15694.complete
GAAGTTATCCTTCGACATGTTGCGAATTCTACTTCTGCTACTGGCATTCT
GTGCCTTGGCACATGGACAGTGCCGATTCACCAGAGCTCAAGTGCAAGGG
ACCAATCGGATCTTTATGGTGCGTGGTCAGAACCGCCAGCTGTCCCTTAA
GCGAACAGCCAGTTCGGCGGTTGGCGAAACCCTGCAGATGTGGTGCAATC
CCCGGGACATAGTGGCCACCACCTGCCAGGCGGGAAGGGTTCCAGCCTTC
CAGCCACCCTTGCCCATGACCTGCCGCGCTGCTCCGGCGGCCATCACCAC
ACCGGTCCAAGATCGCAGATGTCCGGCCACCATGTACCGGGTGGGCTACA
ACGTGGGCAACAACCAGTTCCTGGAGCTCTATCGCGCCTGCTTCGATACC
AGAGCTGTGAGGGCTATCTTCGTGGAACACCGGGTGTATGGAAAGCCCTT
CTATATCACCCGACCCTGTGTCCAATTTAGTTCGGATGGAGTGATCAGTG
GCGCGGATGAAGCTAGCTATACGGTCCGAAATATCCACGGCACCTTTAGG
AGGCTGTTTGGCAACAATCAGAACTATATACCGAACAACCGCGATGTGAT
CATCAATCGCGGACATCTGGCCGCCTCGGCCGACTTCTTCTTTGGTGACC
AATTGTGCGCCACCTTCAAGTATGTGAATGCAGTGCCGCAGTTCAAGAGC
ATCAACGATGGCAACTGGGAGACCATCGAGCGATTCGTTCGTAATTCGGT
GACCGGAAACAACTTTGTGAATGTGCGCACCGGGGCCAGGGGCGTACTCT
CGCTGCCATCGGGCAATAGACCCAAGAATGTCTTCCTAAGTGGCAACAGG
AACCCGGTGCCCCAGTGGATGTACAAGATAGTGCGGAACGCCAACAACCA
GCCCATCGTGGCCTTCCTCACCCTGAACAACATCTACGCACGTCAACGTC
CAGCTGCTCCCAACTTTTGTCAGCCCGTGAATTGCCCAGTGGCATTGGTC
AACACGGCACAGGCTGGCTTTTCGTTCTGTTGCAACCCCGCCACTTTCAG
GCCCTAAAAGCTTTCTAGACCAT
BS15694.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-RB | 1041 | CG14062-PB | 1..1041 | 17..1057 | 5205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:01:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-RB | 1180 | CG14062-RB | 4..1044 | 17..1057 | 5205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28641721..28642325 | 1057..453 | 3025 | 100 | Minus |
3R | 32079331 | 3R | 28642396..28642789 | 452..59 | 1970 | 100 | Minus |
3R | 32079331 | 3R | 28642846..28642888 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 12:01:43 has no hits.
BS15694.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:44:33 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 1..1044 | 14..1057 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 15:17:11 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 9..1042 | 22..1055 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:34 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 9..1042 | 22..1055 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:09:16 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 9..1042 | 22..1055 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:46 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14062-RB | 9..1042 | 22..1055 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:46 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28641723..28642325 | 453..1055 | 100 | <- | Minus |
3R | 28642396..28642788 | 60..452 | 100 | <- | Minus |
3R | 28642846..28642883 | 22..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:34 Download gff for
BS15694.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24467445..24468047 | 453..1055 | 100 | <- | Minus |
arm_3R | 24468118..24468510 | 60..452 | 100 | <- | Minus |
arm_3R | 24468568..24468605 | 22..59 | 100 | | Minus |
BS15694.pep Sequence
Translation from 16 to 1056
> BS15694.pep
MLRILLLLLAFCALAHGQCRFTRAQVQGTNRIFMVRGQNRQLSLKRTASS
AVGETLQMWCNPRDIVATTCQAGRVPAFQPPLPMTCRAAPAAITTPVQDR
RCPATMYRVGYNVGNNQFLELYRACFDTRAVRAIFVEHRVYGKPFYITRP
CVQFSSDGVISGADEASYTVRNIHGTFRRLFGNNQNYIPNNRDVIINRGH
LAASADFFFGDQLCATFKYVNAVPQFKSINDGNWETIERFVRNSVTGNNF
VNVRTGARGVLSLPSGNRPKNVFLSGNRNPVPQWMYKIVRNANNQPIVAF
LTLNNIYARQRPAAPNFCQPVNCPVALVNTAQAGFSFCCNPATFRP*
BS15694.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:21:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14062-PB | 346 | CG14062-PB | 1..346 | 1..346 | 1850 | 100 | Plus |
CG12917-PB | 356 | CG12917-PB | 11..354 | 2..344 | 692 | 38.6 | Plus |
CG33346-PB | 364 | CG33346-PB | 26..345 | 19..344 | 534 | 36.8 | Plus |
CG9989-PA | 370 | CG9989-PA | 10..358 | 5..344 | 304 | 28 | Plus |
CG6839-PA | 430 | CG6839-PA | 94..412 | 53..344 | 253 | 24.8 | Plus |