Clone BS15721 Report

Search the DGRC for BS15721

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCpr49Ac-RC
Protein status:BS15721.pep: full length peptide match
Sequenced Size:1007

Clone Sequence Records

BS15721.complete Sequence

1007 bp assembled on 2010-02-09

GenBank Submission: KX803402

> BS15721.complete
GAAGTTATCAGTCGACATGTTCACCAAGTCAATGCTGAGCTTCTCCCTGG
TCGTGGCCCTCTTCGTTGTCTGCCACGCCAGTCCCGTTCCGGATAATAAT
GGCAAGTATACGGTTCCACAGCAATCCTCTAACGATGGCAAGTATCGCCC
CAGCGACGATGGGAAGTACCATGGGAATTCGCAGAACGAAGGCCGGAGTG
GTTCGCAAGAAAGTATAGGTCGCTATCATCACATGCCGATTCCCTACAGA
CATGTGAGCGATCAGCGTGAGCTTGGAAAATACCATCACATTCCCTATCC
CTATGACGGAGGCTATGGACCCTACGCTGGTTCGAATATTCCCTATGTCC
ATGACGACAGGCCTTACAACCACGACCTGTACACAAGCACGACCACCAAG
AAACCAACCACGACCACCAAAAGGACGACAACCTCGACCACCACCACCAC
CACCACGCCCCGCAATATTCTGTTCAACTACGATGATGAGGGTCGCCACA
AGATCCTGCACAAGGAAGAGGTCCGCAAACAGGACAAATACGATCACTCT
TACCTGACTGAGAATGGAATCTATGGCGAGGAGCAGGCCAAGCTTCACCA
CACCGGAGGCACACATGCCAAGGGATTCTATGAGTACACCGGTGACGATG
GCAAGCTTTATCGCGTAAACTACGCCTCCAACGATGGCGGCTTCATGCCC
CAGGGAGACCACATTCACCCGATCCCCGATGCCATTGTCCGTGCCCTCAA
GTACGTGGAGGAGCAGCACAAGATCAACGGTGGGGCTCAGTTCGACCATC
GCGGCTTCCGCATCAATCACATGACCAAGGACCTTAAGGCGCAGATCAAG
GCGATCCATCTGGAGGAGATGCCCAAGGAGCTGACCGAGCAGATCCATAT
GCTGGAGCACGAGGTGGAGCTCGCCGAGGAGGAGGAGCGCGAGGAGCAGG
CCGCATTGGAGCGACTCCGCCAGGCAGCAAAGTCCCACTAAAAGCTTTCT
AGACCAT

BS15721.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Ac-RC 975 CG8502-PC 1..975 17..991 4875 100 Plus
Cpr49Ac-RA 885 CG8502-PA 85..885 191..991 4005 100 Plus
Cpr49Ac-RG 948 CG8502-PG 174..948 217..991 3875 100 Plus
Cpr49Ac-RA 885 CG8502-PA 1..87 17..103 435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Ac-RC 1434 CG8502-RC 96..1072 15..991 4885 100 Plus
Cpr49Ac-RA 1344 CG8502-RA 182..982 191..991 4005 100 Plus
Cpr49Ac-RG 1701 CG8502-RG 565..1339 217..991 3875 100 Plus
Cpr49Ac-RA 1344 CG8502-RA 96..184 15..103 445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12389254..12389695 550..991 2210 100 Plus
2R 25286936 2R 12388923..12389086 386..549 820 100 Plus
2R 25286936 2R 12388298..12388450 217..369 765 100 Plus
2R 25286936 2R 12387381..12387518 55..192 690 100 Plus
2R 25286936 2R 12387055..12387096 15..56 210 100 Plus
Blast to na_te.dros performed on 2014-11-28 04:25:36 has no hits.

BS15721.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:08 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 84..1051 22..989 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:04 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 103..1070 22..989 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:23:23 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 84..1051 22..989 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:28:29 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 103..1070 22..989 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:28:29 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12387062..12387095 22..55 100 -> Plus
2R 12387382..12387517 56..191 100 -> Plus
2R 12387913..12387939 192..218 100 -> Plus
2R 12388300..12388450 219..369 100 -> Plus
2R 12388518..12388533 370..385 100 -> Plus
2R 12388923..12389086 386..549 100 -> Plus
2R 12389254..12389693 550..989 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:04 Download gff for BS15721.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8274567..8274600 22..55 100 -> Plus
arm_2R 8274887..8275022 56..191 100 -> Plus
arm_2R 8275418..8275444 192..218 100 -> Plus
arm_2R 8275805..8275955 219..369 100 -> Plus
arm_2R 8276023..8276038 370..385 100 -> Plus
arm_2R 8276428..8276591 386..549 100 -> Plus
arm_2R 8276759..8277198 550..989 100   Plus

BS15721.3prime Sequence

834 bp (772 high quality bases) assembled on 2006-12-21

> BS15721.3prime
ATGGTCTAGAAAGCTTTTACTGTGACTTTGCTGCCTGGCGGAGTCGCTCC
AATGCGGCCTGCTCCTCGCGCTCCTCCTCCTCGGCGAGCTCCACCTCGTG
CTCCAGCATATGGATCTGCTCGGTCAGCTCCTTGGGCATCTCCTCCAGAT
GGATCGCCTTGATCTGCGCCTTAAGGTCCTTGGTCATGTGATTGATGCGG
AAGCCGCGATGGTCGAACTGAGCCCCACCGTTGATCTTGTGCTGCTCCTC
CACGTACTTGAGGGCACGGACAATGGCATCGGGGATCGGGTGAATGTGGT
CTCCCTGGGGCATGAAGCCGCCATCGTTGGAGGCGTAGTTTACGCGATAA
AGCTTGCCATCGTCACCGGTGTACTCATAGAATCCCTTGGCATGTGTGCC
TCCGGTGTGGTGAAGCTTGGCCTGCTCCTCGCCATAGATTCCATTCTCAG
TCAGGTAAGAGTGATCGTATTTGTCCTGTTTGCGGACCTCTTCCTTGTGC
AGGATCTTGTGGCGACCCTCATCATCGTAGTTGAACAGAATATTGCGGGG
CGTGGTGGTGGTGGTGGTGGTCGAGGTTGTCGTCCTTTTGGTGGTCGTGG
TTGGTTTCTTGGTGGTCGTGCTTGTGTACAGGTCGTGGTTGTAAGGCCTG
TCGTCATGGACATAGGGAATATTCGAACCAGCGTAGGGTCCATAGCCTCC
GTCATAGGGATAGGGAATGTGATGGTATTTTCCAAGCTCACGCTGATCGC
TCACATGTCTGTAGGGAATCGGCATGTGATGATAGCGACCTATACTTTCT
TGCGAACCACTCCGGCCTTCGTTCTGCGAATTCC

BS15721.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8502-PC 975 CG8502-RC 158..968 834..24 4055 100 Minus
CG8502-PA 885 CG8502-RA 85..878 817..24 3970 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Ac-RC 1434 CG8502-RC 255..1072 834..17 4060 99.8 Minus
Cpr49Ac-RA 1344 CG8502-RA 182..982 817..17 3975 99.8 Minus
Cpr49Ac-RG 1701 CG8502-RG 565..1339 791..17 3845 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:13:40
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12389254..12389695 458..17 2180 99.5 Minus
2R 25286936 2R 12388923..12389086 622..459 820 100 Minus
2R 25286936 2R 12388298..12388450 791..639 765 100 Minus
Blast to na_te.dros performed on 2015-02-02 14:13:45 has no hits.

BS15721.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:21 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8502-PC 158..975 17..834 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:39 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8502-PC 158..975 17..834 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:15:35 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 255..1072 17..834 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:52:20 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 255..1072 17..834 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:52:20 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12388923..12389086 459..622 100 -> Minus
2R 12387500..12387517 817..834 100 -> Minus
2R 12387913..12387939 790..816 100 -> Minus
2R 12388300..12388450 639..789 100 -> Minus
2R 12388518..12388533 623..638 100 -> Minus
2R 12389254..12389695 17..458 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:15:35 Download gff for BS15721.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8276759..8277200 17..458 99   Minus
arm_2R 8275005..8275022 817..834 100 -> Minus
arm_2R 8275418..8275444 790..816 100 -> Minus
arm_2R 8275805..8275955 639..789 100 -> Minus
arm_2R 8276023..8276038 623..638 100 -> Minus
arm_2R 8276428..8276591 459..622 100 -> Minus

BS15721.5prime Sequence

834 bp (758 high quality bases) assembled on 2006-12-21

> BS15721.5prime
GAAGTTATCAGTCGACATGTTCACCAAGTCAATGCTGAGCTTCTCCCTGG
TCGTGGCCCTCTTCGTTGTCTGCCACGCCAGTCCCGTTCCGGATAATAAT
GGCAAGTATACGGTTCCACAGCAATCCTCTAACGATGGCAAGTATCGCCC
CAGCGACGATGGGAAGTACCATGGGAATTCGCAGAACGAAGGCCGGAGTG
GTTCGCAAGAAAGTATAGGTCGCTATCATCACATGCCGATTCCCTACAGA
CATGTGAGCGATCAGCGTGAGCTTGGAAAATACCATCACATTCCCTATCC
CTATGACGGAGGCTATGGACCCTACGCTGGTTCGAATATTCCCTATGTCC
ATGACGACAGGCCTTACAACCACGACCTGTACACAAGCACGACCACCAAG
AAACCAACCACGACCACCAAAAGGACGACAACCTCGACCACCACCACCAC
CACCACGCCCCGCAATATTCTGTTCAACTACGATGATGAGGGTCGCCACA
AGATCCTGCACAAGGAAGAGGTCCGCAAACAGGACAAATACGATCACTCT
TACCTGACTGAGAATGGAATCTATGGCGAGGAGCAGGCCAAGCTTCACCA
CACCGGAGGCACACATGCCAAGGGATTCTATGAGTACACCGGTGACGATG
GCAAGCTTTATCGCGTAAACTACGCCTCCAACGATGGCGGCTTCATGCCC
CAGGGAGACCACATTCACCCGATCCCCGATGCCATTGTCCGTGCCCTCAA
GTACGTGGAGGAGCAGCACAAGATCAACGGTGGGGCTCAGTTCGACCATC
GCGGCTTCCGCATCAATCACATGACCAAGGACCT

BS15721.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8502-PC 975 CG8502-RC 1..818 17..834 4090 100 Plus
CG8502-PA 885 CG8502-RA 85..728 191..834 3220 100 Plus
CG8502-PA 885 CG8502-RA 1..87 17..103 435 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Ac-RC 1434 CG8502-RC 96..915 15..834 4100 100 Plus
Cpr49Ac-RG 1701 CG8502-RG 390..1182 15..834 3630 96.6 Plus
Cpr49Ac-RF 1407 CG8502-RF 96..888 15..834 3630 96.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12389254..12389538 550..834 1425 100 Plus
2R 25286936 2R 12388923..12389086 386..549 820 100 Plus
2R 25286936 2R 12388298..12388450 217..369 765 100 Plus
2R 25286936 2R 12387381..12387518 55..192 690 100 Plus
2R 25286936 2R 12387055..12387096 15..56 210 100 Plus
Blast to na_te.dros performed on 2015-02-08 07:30:29 has no hits.

BS15721.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:23 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8502-PC 1..818 17..834 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:40 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8502-PC 1..818 17..834 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:24:58 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 91..915 10..834 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:22:54 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
Cpr49Ac-RC 91..915 10..834 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:22:54 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12387050..12387095 10..55 95 -> Plus
2R 12387382..12387517 56..191 100 -> Plus
2R 12387913..12387939 192..218 100 -> Plus
2R 12388300..12388450 219..369 100 -> Plus
2R 12388518..12388533 370..385 100 -> Plus
2R 12388923..12389086 386..549 100 -> Plus
2R 12389254..12389538 550..834 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:24:58 Download gff for BS15721.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8274555..8274600 10..55 95 -> Plus
arm_2R 8274887..8275022 56..191 100 -> Plus
arm_2R 8275418..8275444 192..218 100 -> Plus
arm_2R 8275805..8275955 219..369 100 -> Plus
arm_2R 8276023..8276038 370..385 100 -> Plus
arm_2R 8276428..8276591 386..549 100 -> Plus
arm_2R 8276759..8277043 550..834 100   Plus

BS15721.pep Sequence

Translation from 16 to 990

> BS15721.pep
MFTKSMLSFSLVVALFVVCHASPVPDNNGKYTVPQQSSNDGKYRPSDDGK
YHGNSQNEGRSGSQESIGRYHHMPIPYRHVSDQRELGKYHHIPYPYDGGY
GPYAGSNIPYVHDDRPYNHDLYTSTTTKKPTTTTKRTTTSTTTTTTTPRN
ILFNYDDEGRHKILHKEEVRKQDKYDHSYLTENGIYGEEQAKLHHTGGTH
AKGFYEYTGDDGKLYRVNYASNDGGFMPQGDHIHPIPDAIVRALKYVEEQ
HKINGGAQFDHRGFRINHMTKDLKAQIKAIHLEEMPKELTEQIHMLEHEV
ELAEEEEREEQAALERLRQAAKSH*

BS15721.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:10:01
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr49Ac-PC 324 CG8502-PC 1..324 1..324 1762 100 Plus
Cpr49Ac-PG 315 CG8502-PG 1..315 1..324 1699 97.2 Plus
Cpr49Ac-PF 315 CG8502-PF 1..315 1..324 1699 97.2 Plus
Cpr49Ac-PA 294 CG8502-PA 1..294 1..324 1553 90.7 Plus
Cpr49Ac-PE 285 CG8502-PE 1..285 1..324 1501 88 Plus