Clone Sequence Records
BS15722.3prime Sequence
855 bp (774 high quality bases) assembled on 2006-12-21
> BS15722.3prime
ATGGTCTAGAAAGCTTCTAAAAAACTGCTTTTTTGTTTGGGTACCCAAAG
AAACCAATGCTTTTAAGCTCCATAAGAAGCTCGTGGTCGTTGCCAATTGC
CTTGAAAATGGCTTTCTCTAACTCGTCGTATTGGAAGTGTGGCGAAAAGG
GCATGTCGTTCAGGGCGTTGAAGAGCGTGTTCCCGCGCTCGTTGCCAATA
ACCAATGTGCGACCACAGTGGGAAAACCTGGCCACAGTATTAAAAGAAGA
GTCCATCTTGTGCTTGGACATGGGTCTTAGCAAATTTCGGCGAAAGTCCC
AGACGTTAGCGGTTTCCCGGTTCACCGTCACAATAATCGTAGAGTGGGTG
GGGCTCCACTTGGCCCAATGCACTGGGGTCATCTCGTCTAGCAGTTCGAG
AAGAGGTCGCGTGATGCCATCGACCCAAATGCGTACGAACCAATCGTTGC
CGCAGGTGAGGAAGAGTTTGGGAGACCAAGGCGAGAACTCCATTACGGTG
ACACCCCCGTCGTGACAACGCAGGACTTCCAAGTACTGATGCTGATAATT
GATTGAGCACTTGTGGATGCAGCCCTCATCTGTCAGCACGTAGTAAATGT
CCTTGTGCAGAGGATGTGTAGTGATGCTTAAGCCTTGCGGGTGGCGGTTA
GACTCGCAGGGGATACGCGACGATGGGTGAACGAAAATGCCCTCAGGATG
CCCCTCGACTCGCTCCAGAATCATTTGGGTAAAACCAAGCAGGAAGGGAC
TTTTGATAATCCGGAAGCGGGTGACCGAGCCATCCTGGGAGAGGCTCANG
AATGGATCGATGTCTGTTTCATGATCGTCGTCTGAAACTTGTTTGATCCA
ACGGA
BS15722.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7051-PB | 2055 | CG7051-RB | 1222..2055 | 850..17 | 4151 | 99.8 | Minus |
| CG7051-PA | 2295 | CG7051-RA | 1462..2295 | 850..17 | 4151 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 1675..2514 | 855..16 | 4174 | 99.8 | Minus |
| Dic61B-RA | 2616 | CG7051-RA | 1649..2488 | 855..16 | 4174 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:30:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150347..150763 | 439..855 | 2059 | 99.5 | Plus |
| 3L | 28110227 | 3L | 150082..150297 | 226..441 | 1080 | 100 | Plus |
| 3L | 28110227 | 3L | 149807..150020 | 16..229 | 1070 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:30:18 has no hits.
BS15722.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:24 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 1458..2295 | 17..854 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:42 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 1458..2295 | 17..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:33:27 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 1650..2488 | 16..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:30:46 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 1650..2488 | 16..854 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:30:46 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 149807..150018 | 16..227 | 100 | <- | Plus |
| 3L | 150084..150296 | 228..440 | 100 | <- | Plus |
| 3L | 150349..150762 | 441..854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:33:27 Download gff for
BS15722.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 149807..150018 | 16..227 | 100 | <- | Plus |
| arm_3L | 150084..150296 | 228..440 | 100 | <- | Plus |
| arm_3L | 150349..150762 | 441..854 | 99 | | Plus |
BS15722.5prime Sequence
920 bp (806 high quality bases) assembled on 2006-12-21
> BS15722.5prime
GAAGTTATCAGTCGACATGTCCGCGTCAGTAAGAAATACAGTCACTAGCC
AAGAAAATGGGAGTATCTTTAAACGGTCCAGTAACTTAGACAACGAACTC
AAAAAGAAGTCCGTGGTGGTTAATCAGACACAAGCCGAAGAGTCTAAGGC
TAAGAAGAAAGATACTACGCACTATTACAGTGTGGAAACACTTGCCGACC
TGCAGTATCGATCTCAGATAAAGGTTTTGGAAAAGATCTATGGCGAGGAG
GTTGATATGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAGTT
CATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTACAA
TGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGGCC
GGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATACT
TTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGAAG
AGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCTTA
CGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTGGC
CAAGGGATCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTACG
AGTATCTGACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATGAC
GCTCAGACAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATCCT
CATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTACG
ACACGCTGAACAATATCACCAAGGAGTTTCGCACAGCCACTATGAGTTCG
GTAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACCTTT
GAAGACGACGAGGNCGGTGC
BS15722.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7051-PA | 2295 | CG7051-RA | 1..812 | 17..828 | 4060 | 100 | Plus |
| CG7051-PB | 2055 | CG7051-RB | 1..572 | 257..828 | 2860 | 100 | Plus |
| CG7051-PA | 2295 | CG7051-RA | 838..898 | 853..913 | 280 | 98.3 | Plus |
| CG7051-PB | 2055 | CG7051-RB | 598..658 | 853..913 | 280 | 98.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:23:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2616 | CG7051-RA | 192..1097 | 16..920 | 4419 | 99.3 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 276..1123 | 74..920 | 4129 | 99.3 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 192..249 | 16..73 | 290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:22:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 151315..151791 | 920..445 | 2234 | 98.3 | Minus |
| 3L | 28110227 | 3L | 151848..152071 | 445..222 | 1120 | 100 | Minus |
| 3L | 28110227 | 3L | 152121..152272 | 225..74 | 760 | 100 | Minus |
| 3L | 28110227 | 3L | 152341..152398 | 73..16 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:23:00 has no hits.
BS15722.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:25 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 1..905 | 17..920 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:43 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-PA | 1..905 | 17..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:28:44 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 189..1097 | 10..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:51:50 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 189..1097 | 10..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:51:50 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 151315..151790 | 446..920 | 98 | <- | Minus |
| 3L | 151848..152069 | 224..445 | 100 | <- | Minus |
| 3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| 3L | 152341..152401 | 10..73 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:28:44 Download gff for
BS15722.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 151315..151790 | 446..920 | 98 | <- | Minus |
| arm_3L | 151848..152069 | 224..445 | 100 | <- | Minus |
| arm_3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| arm_3L | 152341..152401 | 10..73 | 95 | | Minus |
BS15722.complete Sequence
2327 bp assembled on 2010-05-13
GenBank Submission: KX801377
> BS15722.complete
GAAGTTATCAGTCGACATGTCCGCGTCAGTAAGAAATACAGTCACTAGCC
AAGAAAATGGGAGTATCTTTAAACGGTCCAGTAACTTAGACAACGAACTC
AAAAAGAAGTCCGTGGTGGTTAATCAGACACAAGCCGAAGAGTCTAAGGC
TAAGAAGAAAGATACTACGCACTATTACAGTGTGGAAACACTTGCCGACC
TGCAGTATCGATCTCAGATAAAGGTTTTGGAAAAGATCTATGGCGAGGAG
GTTGATATGACACCTAAGTCGATCCAAGATGACACCTATGTGGAGCAGTT
CATGAAGTACAACCTAAATGTCATGCACCAAATGACTAACTTCACTACAA
TGGTAGCGAAGAGCACGACCAGATCCCGCACGCGGTCTAGTGTTCGGGCC
GGAATAGGCGGCAATAAGCAGTCCATTGACGACCTGATGAACGGGATACT
TTATGAAACTATTAACTGGGAACCGTACAGCACTGTTGAGGCTCTCGAAG
AGGCGTACGAGCCAAAGCCGTATACCAAGTCCTTTTTAAAGATCACCTTA
CGCAAGTCTGACTTCTTCGAAATTCACAGCCAGACGCAGACGACGGTGGC
CAAGGGATCGCCCGAGGGCGACGATGCGGAGCGAGACAACCGAAACTACG
AGTATCTGACAATAGGGAAAGGCAAAATTCGCCGGCGCTCAGACAATGAC
GCTCAGACAGATACTCTGCTCTTCACCACTCGGGCAGTCAACACCATCCT
CATAACCAAGGCCACCGTCAGCTCTTACGTTTCCAACTTTGAGATGTACG
ACACGCTGAACAATATCACCAAGGAGTTCGCAACAGCCACTATGAGTTCG
GTAAAGGACCTGACCTCGGCTCTAGCGCAGACGGAGGATGCGGATACCTT
TGAGGACGACGAGGCCGTTGCCGAAAAAGACAAGGTCAGCAGCCAGATAG
AGCGCCTGTTCCGGAGCCCCGAGTTTCGCAACGCCATCATGTACATGGGC
CGCACGCTCTCGAGCAACACAAACGAGGCGGGGTTACGACGCTTCCGTAA
CTTTGACCAGGTGGAACGCTGGAACGCGGAGGCCGAGTACGTCTACTCGA
TGAACTTGCTCTTTCGGCTGGTACCGGAGCCCAGCAAAGACGAGCGCAAG
GCCGTAAGCGACATTGATTTCTGCCGCAGCAATGGTGACATCCTGGCTGT
AGCCTACGGACTGTACTCATTTTCCTCACAGCACGTACCGACCTCCGGCA
GCGTTTTCCTGTGGAGCATTAAAAATCCAGGCGAGCCGGAGCGCGCATAC
TACTACGATGTGCCAGTAACGGCAATAAACTTCTCGCCATTCTTGCCATC
CTTGCTCGCCATTGGTCTGTACGACGGCAGCGTGGAAGTGCGAGATGTGA
GCAGTTTGCAGGACACACCCGTTGCGGTCTCGCAGCGCAGCACTTCGCCA
GGCTCCTCGCCGGTGGTTGCCATCCGCTGGATCAAACAAGTTTCAGACGA
CGATCATGAAACAGACATCGATCCATTCCTGAGCCTCTCCCAGGATGGCT
CGGTCACCCGCTTCCGGATTATCAAAAGTCCCTTCCTGCTTGGTTTTACC
CAAATGATTCTGGAGCGAGTCGAGGGGCATCCTGAGGGCATTTTCGTTCA
CCCATCGTCGCGTATCCCCTGCGAGTCTAACCGCCACCCGCAAGGCTTAA
GCATCACTACACATCCTCTGCACAAGGACATTTACTACGTGCTGACAGAT
GAGGGCTGCATCCACAAGTGCTCAATCAATTATCAGCATCAGTACTTGGA
AGTCCTGCGTTGTCACGACGGGGGTGTCACCGTAATGGAGTTCTCGCCTT
GGTCTCCCAAACTCTTCCTCACCTGCGGCAACGATTGGTTCGTACGCATT
TGGGTCGATGGCATCACGCGACCTCTTCTCGAACTGCTAGACGAGATGAC
CCCAGTGCATTGGGCCAAGTGGAGCCCCACCCACTCTACGATTATTGTGA
CGGTGAACCGGGAAACCGCTAACGTCTGGGACTTTCGCCGAAATTTGCTA
AGACCCATGTCCAAGCACAAGATGGACTCTTCTTTTAATACTGTGGCCAG
GTTTTCCCACTGTGGTCGCACATTGGTTATTGGCAACGAGCGCGGGAACA
CGCTCTTCAACGCCCTGAACGACATGCCCTTTTCGCCACACTTCCAATAC
GACGAGTTAGAGAAAGCCATTTTCAAGGCAATTGGCAACGACCACGAGCT
TCTTATGGAGCTTAAAAGCATTGGTTTCTTTGGGTACCCAAACAAAAAAG
CAGTTTTTTAGAAGCTTTCTAGACCAT
BS15722.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:16:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2295 | CG7051-PA | 1..2295 | 17..2311 | 11475 | 100 | Plus |
| Dic61B-RB | 2055 | CG7051-PB | 1..2055 | 257..2311 | 10275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:16:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RA | 2616 | CG7051-RA | 192..2488 | 16..2312 | 11485 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 276..2514 | 74..2312 | 11195 | 100 | Plus |
| Dic61B-RB | 2642 | CG7051-RB | 192..249 | 16..73 | 290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:16:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150347..151791 | 1889..445 | 7225 | 100 | Minus |
| 3L | 28110227 | 3L | 151848..152071 | 445..222 | 1120 | 100 | Minus |
| 3L | 28110227 | 3L | 150082..150297 | 2102..1887 | 1080 | 100 | Minus |
| 3L | 28110227 | 3L | 149807..150020 | 2312..2099 | 1070 | 100 | Minus |
| 3L | 28110227 | 3L | 152121..152272 | 225..74 | 760 | 100 | Minus |
| 3L | 28110227 | 3L | 152341..152398 | 73..16 | 290 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:16:07 has no hits.
BS15722.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-13 13:55:49 Download gff for
BS15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 193..2487 | 17..2311 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:15:09 Download gff for
BS15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 193..2487 | 17..2311 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:25:30 Download gff for
BS15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 193..2487 | 17..2311 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:25:30 Download gff for
BS15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| 3L | 152341..152397 | 17..73 | 100 | | Minus |
| 3L | 149808..150018 | 2101..2311 | 100 | <- | Minus |
| 3L | 150084..150296 | 1888..2100 | 100 | <- | Minus |
| 3L | 150349..151790 | 446..1887 | 100 | <- | Minus |
| 3L | 151848..152069 | 224..445 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:15:09 Download gff for
BS15722.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 152123..152272 | 74..223 | 100 | <- | Minus |
| arm_3L | 149808..150018 | 2101..2311 | 100 | <- | Minus |
| arm_3L | 150084..150296 | 1888..2100 | 100 | <- | Minus |
| arm_3L | 150349..151790 | 446..1887 | 100 | <- | Minus |
| arm_3L | 151848..152069 | 224..445 | 100 | <- | Minus |
| arm_3L | 152341..152397 | 17..73 | 100 | | Minus |
BS15722.pep Sequence
Translation from 16 to 2310
> BS15722.pep
MSASVRNTVTSQENGSIFKRSSNLDNELKKKSVVVNQTQAEESKAKKKDT
THYYSVETLADLQYRSQIKVLEKIYGEEVDMTPKSIQDDTYVEQFMKYNL
NVMHQMTNFTTMVAKSTTRSRTRSSVRAGIGGNKQSIDDLMNGILYETIN
WEPYSTVEALEEAYEPKPYTKSFLKITLRKSDFFEIHSQTQTTVAKGSPE
GDDAERDNRNYEYLTIGKGKIRRRSDNDAQTDTLLFTTRAVNTILITKAT
VSSYVSNFEMYDTLNNITKEFATATMSSVKDLTSALAQTEDADTFEDDEA
VAEKDKVSSQIERLFRSPEFRNAIMYMGRTLSSNTNEAGLRRFRNFDQVE
RWNAEAEYVYSMNLLFRLVPEPSKDERKAVSDIDFCRSNGDILAVAYGLY
SFSSQHVPTSGSVFLWSIKNPGEPERAYYYDVPVTAINFSPFLPSLLAIG
LYDGSVEVRDVSSLQDTPVAVSQRSTSPGSSPVVAIRWIKQVSDDDHETD
IDPFLSLSQDGSVTRFRIIKSPFLLGFTQMILERVEGHPEGIFVHPSSRI
PCESNRHPQGLSITTHPLHKDIYYVLTDEGCIHKCSINYQHQYLEVLRCH
DGGVTVMEFSPWSPKLFLTCGNDWFVRIWVDGITRPLLELLDEMTPVHWA
KWSPTHSTIIVTVNRETANVWDFRRNLLRPMSKHKMDSSFNTVARFSHCG
RTLVIGNERGNTLFNALNDMPFSPHFQYDELEKAIFKAIGNDHELLMELK
SIGFFGYPNKKAVF*
BS15722.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:32:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-PA | 764 | CG7051-PA | 1..764 | 1..764 | 3986 | 100 | Plus |
| Dic61B-PB | 684 | CG7051-PB | 1..684 | 81..764 | 3593 | 100 | Plus |
| CG13930-PA | 685 | CG13930-PA | 42..677 | 117..758 | 1301 | 43.2 | Plus |
| CG9313-PC | 739 | CG9313-PC | 355..681 | 374..712 | 310 | 28.7 | Plus |
| CG9313-PA | 739 | CG9313-PA | 355..681 | 374..712 | 310 | 28.7 | Plus |
