Clone Sequence Records
BS15723.5prime Sequence
474 bp (474 high quality bases) assembled on 2006-12-21
> BS15723.5prime
GAAGTTATCAGTCGACATGTCCGACTACTTCGAGGAACTGGGTCATGAAC
CCACTGGACCACTGGGCGCAAACGATTTGGCCAGAAATCTAAAGCGCCTT
CAGGTTTTGGCCATCATGAATGGCATCGATATGGAGATCGAGGTGCCAGA
GGCCTCCAAGCGAGCCATTCTGGAGCTACCAGTTCATGAAATCGTCAAAT
CGGACGAGGGCGGCGATTTGGAGTGCTCTGTGTGCAAGGAGCCAGCTGAA
GAGGGCCAGAAGTACAGGATCCTTCCATGCAAGCACGAGTTCCACGAGGA
GTGCATCCTGCTCTGGCTGAAGAAGACGAATTCCTGTCCTCTGTGTCGCT
ATGAACTGGAAACTGATGATCCTGTTTACGAGGAGTTGCGCAGGTTTAGG
CAGGATGAAGCTAACCGACGGGAGCGGGAGAACACTCTTTTGGATTCCAT
GTTCGGCTAAAAGCTTTCTAGACC
BS15723.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PA | 444 | CG7694-RA | 1..444 | 17..460 | 2220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:31:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..560 | 16..460 | 2225 | 100 | Plus |
CG7694-RB | 640 | CG7694-RB | 125..569 | 16..460 | 2225 | 100 | Plus |
CG7694-RA | 970 | CG7694-RA | 455..899 | 16..460 | 2225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:31:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 16..325 | 1550 | 100 | Plus |
3R | 32079331 | 3R | 18590519..18590655 | 324..460 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 12:31:55 has no hits.
BS15723.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:27 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..460 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:46 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..460 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:38:09 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 14:02:33 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 455..902 | 16..466 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 14:02:33 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590521..18590658 | 326..466 | 97 | | Plus |
3R | 18590109..18590427 | 2..325 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:38:09 Download gff for
BS15723.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415831..14416149 | 2..325 | 98 | -> | Plus |
arm_3R | 14416243..14416380 | 326..466 | 97 | | Plus |
BS15723.3prime Sequence
474 bp (474 high quality bases) assembled on 2006-12-21
> BS15723.3prime
ATGGTCTAGAAAGCTTTTACCCGAACATGGAATCCAAAAGAGTGTTCTCC
CGCTCCCGTCGGTTAGCTTCATCCTGCCTAAACCTGCGCAACTCCTCGTA
AACAGGATCATCAGTTTCCAGTTCATAGCGACACAGAGGACAGGAATTCG
TCTTCTTCAGCCAGAGCAGGATGCACTCCTCGTGGAACTCGTGCTTGCAT
GGAAGGATCCTGTACTTCTGGCCCTCTTCAGCTGGCTCCTTGCACACAGA
GCACTCCAAATCGCCGCCCTCGTCCGATTTGACGATTTCATGAACTGGTA
GCTCCAGAATGGCTCGCTTGGAGGCCTCTGGCACCTCGATCTCCATATCG
ATGCCATTCATGATGGCCAAAACCTGAAGGCGCTTTAGATTTCTGGCCAA
ATCGTTTGCGCCCAGTGGTCCAGTGGGTTCATGACCCAGTTCCTCGAAGT
AGTCGGACATGTCGACTGATAACT
BS15723.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PA | 444 | CG7694-RA | 1..440 | 460..21 | 2200 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:39:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..560 | 461..17 | 2210 | 99.8 | Minus |
CG7694-RB | 640 | CG7694-RB | 125..569 | 461..17 | 2210 | 99.8 | Minus |
CG7694-RA | 970 | CG7694-RA | 455..899 | 461..17 | 2210 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 04:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 461..152 | 1550 | 100 | Minus |
3R | 32079331 | 3R | 18590519..18590655 | 153..17 | 670 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-01-30 04:39:42 has no hits.
BS15723.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:26 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..460 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:14:44 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-PA | 1..444 | 17..460 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 05:32:45 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 11..461 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 06:47:49 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 455..902 | 11..461 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 06:47:49 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590109..18590427 | 152..474 | 98 | -> | Minus |
3R | 18590521..18590658 | 11..151 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:32:45 Download gff for
BS15723.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415831..14416149 | 152..474 | 98 | -> | Minus |
arm_3R | 14416243..14416380 | 11..151 | 97 | | Minus |
BS15723.complete Sequence
476 bp assembled on 2006-11-29
GenBank Submission: FJ637953
> BS15723.complete
GAAGTTATCAGTCGACATGTCCGACTACTTCGAGGAACTGGGTCATGAAC
CCACTGGACCACTGGGCGCAAACGATTTGGCCAGAAATCTAAAGCGCCTT
CAGGTTTTGGCCATCATGAATGGCATCGATATGGAGATCGAGGTGCCAGA
GGCCTCCAAGCGAGCCATTCTGGAGCTACCAGTTCATGAAATCGTCAAAT
CGGACGAGGGCGGCGATTTGGAGTGCTCTGTGTGCAAGGAGCCAGCTGAA
GAGGGCCAGAAGTACAGGATCCTTCCATGCAAGCACGAGTTCCACGAGGA
GTGCATCCTGCTCTGGCTGAAGAAGACGAATTCCTGTCCTCTGTGTCGCT
ATGAACTGGAAACTGATGATCCTGTTTACGAGGAGTTGCGCAGGTTTAGG
CAGGATGAAGCTAACCGACGGGAGCGGGAGAACACTCTTTTGGATTCCAT
GTTCGGCTAAAAGCTTTCTAGACCAT
BS15723.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:23:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 444 | CG7694-PC | 1..444 | 17..460 | 2220 | 100 | Plus |
CG7694-RB | 444 | CG7694-PB | 1..444 | 17..460 | 2220 | 100 | Plus |
CG7694-RA | 444 | CG7694-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:23:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-RC | 631 | CG7694-RC | 116..560 | 16..460 | 2225 | 100 | Plus |
CG7694-RB | 640 | CG7694-RB | 125..569 | 16..460 | 2225 | 100 | Plus |
CG7694-RA | 970 | CG7694-RA | 455..899 | 16..460 | 2225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:23:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18590118..18590427 | 16..325 | 1550 | 100 | Plus |
3R | 32079331 | 3R | 18590519..18590655 | 324..460 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:23:27 has no hits.
BS15723.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:19 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RB | 1..444 | 17..460 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:46 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:50:19 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 452..893 | 17..458 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:20 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 451..898 | 16..466 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:06:36 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7694-RA | 456..897 | 17..458 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:06:36 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18590119..18590427 | 17..325 | 100 | -> | Plus |
3R | 18590521..18590653 | 326..458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:50:19 Download gff for
BS15723.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14415841..14416149 | 17..325 | 100 | -> | Plus |
arm_3R | 14416243..14416375 | 326..458 | 100 | | Plus |
BS15723.pep Sequence
Translation from 16 to 459
> BS15723.pep
MSDYFEELGHEPTGPLGANDLARNLKRLQVLAIMNGIDMEIEVPEASKRA
ILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLW
LKKTNSCPLCRYELETDDPVYEELRRFRQDEANRRERENTLLDSMFG*
BS15723.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7694-PC | 147 | CG7694-PC | 1..147 | 1..147 | 784 | 100 | Plus |
CG7694-PB | 147 | CG7694-PB | 1..147 | 1..147 | 784 | 100 | Plus |
CG7694-PA | 147 | CG7694-PA | 1..147 | 1..147 | 784 | 100 | Plus |
gol-PE | 461 | CG2679-PE | 278..347 | 47..114 | 144 | 40.8 | Plus |
gol-PC | 461 | CG2679-PC | 278..347 | 47..114 | 144 | 40.8 | Plus |