Clone Sequence Records
BS15730.3prime Sequence
387 bp (387 high quality bases) assembled on 2006-12-21
> BS15730.3prime
ATGGTCTAGAAAGCTTCTACCTTTTTACATATTCAATCTTACGCTTTTGC
AACTCATCAATTTTCTTTGAATACTCATCTGCTGCTTGCTTGGCTCTAAG
AGTAGCTTCATTTAAATCGTAAATGGAAAACGGATGATAGTTGTAGGTGA
ACATTTTCGTCTGCCCATCAACCAGTTGATCCTGATTTTGAACACACCTT
GGGCTTATAAAGTAGGGTAGCTTCATATTGGATACGCCGTCCACTTCCTC
AGCTTTTTGCTCAAATTTTTCTTCGGAACTTGCGTGGGATTTAATCAATG
TCGGGAATCTGCGAAAATGGGTCAGTGGCCAGATGGGAAGTTTCTTTGCG
CTGCCTCTCATCGTGGTCAACATGTCGACTGATAACT
BS15730.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-PA | 357 | CG16964-RA | 1..350 | 373..24 | 1700 | 99.4 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:53:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-RB | 793 | CG16964-RB | 100..456 | 373..17 | 1725 | 98.9 | Minus |
| CG16964-RA | 589 | CG16964-RA | 76..432 | 373..17 | 1725 | 98.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11948110..11948466 | 373..17 | 1725 | 98.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 16:53:14 has no hits.
BS15730.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:40 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-PA | 1..357 | 17..373 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:05 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-PA | 1..357 | 17..373 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:30:46 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:41:20 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:41:20 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11948103..11948466 | 17..380 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:30:46 Download gff for
BS15730.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11948103..11948466 | 17..380 | 97 | | Minus |
BS15730.5prime Sequence
387 bp (387 high quality bases) assembled on 2006-12-21
> BS15730.5prime
GAAGTTATCAGTCGACATGTTGACCACGATGAGAGGCAGCGCAAAGAAAC
TTCCCATCTGGCCACTGACCCATTTTCGCAGATTCCCGACATTGATTAAA
TCCCACGCAAGTTCCGAAGAAAAATTTGAGCAAAAAGCTGAGGAAGTGGA
CGGCGTATCCAATATGAAGCTACCCTACTTTATAAGCCCAAGGTGTGTTC
AAAATCAGGATCAACTGGTTGATGGGCAGACGAAAATGTTCACCTACAAC
TATCATCCGTTTTCCATTTACGATTTAAATGAAGCTACTCTTCGCGCCAA
GCAAGCAGCAGATGAGTATTCAAAGAAAATTGATGAGTTGCAAAAGCGTA
AGATTGAATATGTAAACAAGTAGAAGCTTTCTAGACC
BS15730.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-PA | 357 | CG16964-RA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:38:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-RB | 793 | CG16964-RB | 100..456 | 17..373 | 1785 | 100 | Plus |
| CG16964-RA | 589 | CG16964-RA | 76..432 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 18:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11948110..11948466 | 17..373 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-10 18:38:48 has no hits.
BS15730.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:42 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-PA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:06 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-PA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-20 13:04:27 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 20:54:31 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 20:54:31 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11948103..11948466 | 10..373 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-20 13:04:27 Download gff for
BS15730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11948103..11948466 | 10..373 | 98 | | Plus |
BS15730.complete Sequence
389 bp assembled on 2006-11-29
GenBank Submission: FJ637954
> BS15730.complete
GAAGTTATCAGTCGACATGTTGACCACGATGAGAGGCAGCGCAAAGAAAC
TTCCCATCTGGCCACTGACCCATTTTCGCAGATTCCCGACATTGATTAAA
TCCCACGCAAGTTCCGAAGAAAAATTTGAGCAAAAAGCTGAGGAAGTGGA
CGGCGTATCCAATATGAAGCTACCCTACTTTATAAGCCCAAGGTGTGTTC
AAAATCAGGATCAACTGGTTGATGGGCAGACGAAAATGTTCACCTACAAC
TATCATCCGTTTTCCATTTACGATTTAAATGAAGCTACTCTTCGCGCCAA
GCAAGCAGCAGATGAGTATTCAAAGAAAATTGATGAGTTGCAAAAGCGTA
AGATTGAATATGTAAACAAGTAGAAGCTTTCTAGACCAT
BS15730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:53:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-RB | 357 | CG16964-PB | 1..357 | 17..373 | 1785 | 100 | Plus |
| CG16964-RA | 357 | CG16964-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:53:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-RB | 793 | CG16964-RB | 100..456 | 17..373 | 1785 | 100 | Plus |
| CG16964-RA | 589 | CG16964-RA | 76..432 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:53:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11948110..11948466 | 17..373 | 1785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:53:22 has no hits.
BS15730.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:22 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:49 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:55 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 81..432 | 22..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:22 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 76..432 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:57:19 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16964-RA | 81..432 | 22..373 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:57:19 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11948115..11948466 | 22..373 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:55 Download gff for
BS15730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11948115..11948466 | 22..373 | 100 | | Plus |
BS15730.pep Sequence
Translation from 16 to 372
> BS15730.pep
MLTTMRGSAKKLPIWPLTHFRRFPTLIKSHASSEEKFEQKAEEVDGVSNM
KLPYFISPRCVQNQDQLVDGQTKMFTYNYHPFSIYDLNEATLRAKQAADE
YSKKIDELQKRKIEYVNK*
BS15730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16964-PB | 118 | CG16964-PB | 1..118 | 1..118 | 618 | 100 | Plus |
| CG16964-PA | 118 | CG16964-PA | 1..118 | 1..118 | 618 | 100 | Plus |
