Clone BS15737 Report

Search the DGRC for BS15737

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG31522-RB
Protein status:BS15737.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15737.3prime Sequence

714 bp (710 high quality bases) assembled on 2006-12-21

> BS15737.3prime
ATGGTCTAGAAAGCTTTTATTTCGGCGTCTTCCGCTGTTTCAGCTCCTGG
GAGGCGTCGTCCAGCAGCTTGGTGGCATACCCGTTGCTCAGTCCTCCGTT
GGACCCCTTGTGCGCGCTGCCGTTGGCCACCTGCTTGTAGACGTTCTCCA
CCCCATTGGCATGTCCATTGCTCGGCGGGGTGCTGCTCCCGTTGGCCTTG
GATGCGGGCGTCGCTGTCGCTGTCGCCTCCGTGGTCTGTGGCATGGCCAG
ATCGTCATGGGCGTTGATGCTCTTGCAGTAGCCATTGGGCTTGGCGTGTC
CGTTGGCCAGGGCTCCGTTCTTTTTCATCATGCGGCTCCTGTAGGCTGCC
TTGTAGAACTCGTTGAACAGGAAGAAGAACATGACGGCATGCATGCCAAT
CCACCAGACGAACGCCTTCGGGTAGTTGCAATCGATGAAGAGCAGCTGGA
AGGCGTGCACCATGATCAAGATGAACTGGACCATCTGCAGAGTGGTCAGG
TACTTCTTCCACCAGAGGTATTTCTGGTACTGCGGACCCATGGCGGAGAA
CATGTAGTAGGTGTACATCACGATGTGGACGAAGGTGTTGAGCAGGCCGA
AGAAGGTGCTGTGACCACCCGGTGTGAACTTGACGCCGAACCAGACCGAC
ATGGGCATGCAGCCGTGATGGATGACGTGCAGTGTGGTAACTTGGCTCGA
CTTCTTGCGCAACA

BS15737.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PD 1098 CG31522-RD 401..1098 714..17 3490 100 Minus
CG31522-PA 1095 CG31522-RA 398..1095 714..17 3490 100 Minus
CG31522-PB 1098 CG31522-RB 401..1098 714..17 3490 100 Minus
CG31523-PC 1065 CG31523-RC 555..623 560..492 195 91.3 Minus
CG31523-PB 1065 CG31523-RB 555..623 560..492 195 91.3 Minus
CG31523-PA 1065 CG31523-RA 555..623 560..492 195 91.3 Minus
CG31523-PD 1065 CG31523-RD 555..623 560..492 195 91.3 Minus
CG31523-PC 1065 CG31523-RC 428..461 687..654 145 97 Minus
CG31523-PB 1065 CG31523-RB 428..461 687..654 145 97 Minus
CG31523-PA 1065 CG31523-RA 428..461 687..654 145 97 Minus
CG31523-PD 1065 CG31523-RD 428..461 687..654 145 97 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RI 2964 CG31522-RI 935..1632 714..17 3490 100 Minus
CG31522-RH 2213 CG31522-RH 719..1416 714..17 3490 100 Minus
CG31522-RG 2352 CG31522-RG 858..1555 714..17 3490 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4442747..4443056 17..326 1550 100 Plus
3R 32079331 3R 4443902..4444058 326..482 785 100 Plus
3R 32079331 3R 4444110..4444249 480..619 700 100 Plus
3R 32079331 3R 7982801..7983059 436..694 545 80.7 Plus
3R 32079331 3R 4444319..4444417 616..714 495 100 Plus
3R 32079331 3R 4467642..4467766 492..616 325 84 Plus
3R 32079331 3R 22555685..22555806 581..460 235 79.5 Minus
3R 32079331 3R 22559608..22559737 480..609 230 78.5 Plus
3R 32079331 3R 22532970..22533076 483..589 205 79.4 Plus
Blast to na_te.dros performed on 2015-01-30 12:18:17 has no hits.

BS15737.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:52 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PA 399..1095 17..713 100   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:20 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PB 402..1098 17..713 100   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:34:18 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RG 859..1555 17..713 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 13:59:18 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RG 859..1555 17..713 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 13:59:18 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4444112..4444248 482..618 100 <- Plus
3R 4444322..4444416 619..713 100   Plus
3R 4442747..4443055 17..325 100 <- Plus
3R 4443902..4444057 326..481 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:34:18 Download gff for BS15737.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 268469..268777 17..325 100 <- Plus
arm_3R 269624..269779 326..481 100 <- Plus
arm_3R 269834..269970 482..618 100 <- Plus
arm_3R 270044..270138 619..713 100   Plus

BS15737.5prime Sequence

822 bp (798 high quality bases) assembled on 2006-12-21

> BS15737.5prime
GAAGTTATCAGTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGATAGGCATTTCCGGTTGGCTAACTGGACATTATAG
CTTCCGATGTCAGCCAGTCGACTATAGTAATAATCCTAGAACGTTAAGGA
TGGTTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATG
GATACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACT
GCACGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCA
AGTTCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTC
GTCCACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCA
GTACCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGG
TCCAGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGAT
TGCAACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCAT
GTTCTTCTTCCTGTTCAACGAGTTCTACAAGGCAGCCTACAGGAGCCGCA
TGATGAAAAAGAACGGAGCCCT

BS15737.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PD 1098 CG31522-RD 1..806 17..822 4030 100 Plus
CG31522-PB 1098 CG31522-RB 1..806 17..822 4030 100 Plus
CG31522-PA 1095 CG31522-RA 331..803 350..822 2365 100 Plus
CG31522-PA 1095 CG31522-RA 1..249 17..265 1245 100 Plus
CG31522-PC 231 CG31522-RC 1..58 17..74 290 100 Plus
CG31523-PC 1065 CG31523-RC 555..623 571..639 195 91.3 Plus
CG31523-PB 1065 CG31523-RB 555..623 571..639 195 91.3 Plus
CG31523-PA 1065 CG31523-RA 555..623 571..639 195 91.3 Plus
CG31523-PD 1065 CG31523-RD 555..623 571..639 195 91.3 Plus
CG31523-PC 1065 CG31523-RC 428..461 444..477 145 97 Plus
CG31523-PB 1065 CG31523-RB 428..461 444..477 145 97 Plus
CG31523-PA 1065 CG31523-RA 428..461 444..477 145 97 Plus
CG31523-PD 1065 CG31523-RD 428..461 444..477 145 97 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RF 2883 CG31522-RF 454..1259 17..822 4030 100 Plus
CG31522-RB 2216 CG31522-RB 322..1127 17..822 4030 100 Plus
CG31522-RD 2760 CG31522-RD 331..1136 17..822 4030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4443902..4444058 805..649 785 100 Minus
3R 32079331 3R 4444110..4444249 651..512 700 100 Minus
3R 32079331 3R 7982801..7983135 695..361 625 79.1 Minus
3R 32079331 3R 4446412..4446534 278..156 570 97.6 Minus
3R 32079331 3R 4444319..4444428 515..406 550 100 Minus
3R 32079331 3R 4446737..4446823 160..74 435 100 Minus
3R 32079331 3R 4445332..4445417 349..264 430 100 Minus
3R 32079331 3R 4467642..4467766 639..515 325 84 Minus
3R 32079331 3R 4444506..4444563 406..349 290 100 Minus
3R 32079331 3R 4447701..4447758 74..17 290 100 Minus
3R 32079331 3R 22555685..22555806 550..671 235 79.5 Plus
3R 32079331 3R 22559608..22559737 651..522 230 78.5 Minus
3R 32079331 3R 22532970..22533076 648..542 205 79.4 Minus
Blast to na_te.dros performed on 2015-02-11 15:51:46 has no hits.

BS15737.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:53 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PB 1..806 17..822 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:21 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-PB 1..806 17..822 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:49:22 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RD 324..1136 9..822 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:31:39 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31522-RD 324..1136 9..822 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:31:39 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4443039..4443055 806..822 100 <- Minus
3R 4443902..4444057 650..805 100 <- Minus
3R 4444112..4444248 513..649 100 <- Minus
3R 4444322..4444427 407..512 100 <- Minus
3R 4444506..4444562 350..406 100 <- Minus
3R 4445332..4445415 266..349 100 <- Minus
3R 4446425..4446532 158..265 100 <- Minus
3R 4446740..4446822 75..157 100 <- Minus
3R 4447701..4447762 9..74 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:49:22 Download gff for BS15737.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 270044..270149 407..512 100 <- Minus
arm_3R 270228..270284 350..406 100 <- Minus
arm_3R 271054..271137 266..349 100 <- Minus
arm_3R 272147..272254 158..265 100 <- Minus
arm_3R 272462..272544 75..157 100 <- Minus
arm_3R 273423..273484 9..74 93   Minus
arm_3R 268761..268777 806..822 100 <- Minus
arm_3R 269624..269779 650..805 100 <- Minus
arm_3R 269834..269970 513..649 100 <- Minus

BS15737.complete Sequence

1130 bp assembled on 2006-11-29

GenBank Submission: FJ637955

> BS15737.complete
GAAGTTATCAGTCGACATGGCCTTAATTATGAAATACATCGACAGCATAA
GCAGATACATGGACTCACATAGTGACTCGAGGACAAAGGGCTGGCCCATG
ATGTCGTCCCCATTCCCCACACTGGCCGTTTGCCTCACATATGTCTATCT
GGTCAAGGTGCTGGGACCCCGATTAATGGAGAACCGAAAGCCTCTGAATC
TGCAAAACACTCTAGTCATGTACAATGCCATACAGGTTGTATTTAGCGCA
TGGCTGTTTTATGAGATAGGCATTTCCGGTTGGCTAACTGGACATTATAG
CTTCCGATGTCAGCCAGTCGACTATAGTAATAATCCTAGAACGTTAAGGA
TGGTTCATGCCTGCTGGTGGTACTACTTCTCGAAGTTTACAGAATTCATG
GATACGATTTTCTTCGTGTTGCGCAAGAAGTCGAGCCAAGTTACCACACT
GCACGTCATCCATCACGGCTGCATGCCCATGTCGGTCTGGTTCGGCGTCA
AGTTCACACCGGGTGGTCACAGCACCTTCTTCGGCCTGCTCAACACCTTC
GTCCACATCGTGATGTACACCTACTACATGTTCTCCGCCATGGGTCCGCA
GTACCAGAAATACCTCTGGTGGAAGAAGTACCTGACCACTCTGCAGATGG
TCCAGTTCATCTTGATCATGGTGCACGCCTTCCAGCTGCTCTTCATCGAT
TGCAACTACCCGAAGGCGTTCGTCTGGTGGATTGGCATGCATGCCGTCAT
GTTCTTCTTCCTGTTCAACGAGTTCTACAAGGCAGCCTACAGGAGCCGCA
TGATGAAAAAGAACGGAGCCCTGGCCAACGGACACGCCAAGCCCAATGGC
TACTGCAAGAGCATCAACGCCCATGACGATCTGGCCATGCCACAGACCAC
GGAGGCGACAGCGACAGCGACGCCCGCATCCAAGGCCAACGGGAGCAGCA
CCCCGCCGAGCAATGGACATGCCAATGGGGTGGAGAACGTCTACAAGCAG
GTGGCCAACGGCAGCGCGCACAAGGGGTCCAACGGAGGACTGAGCAACGG
GTATGCCACCAAGCTGCTGGACGACGCCTCCCAGGAGCTGAAACAGCGGA
AGACGCCGAAATAAAAGCTTTCTAGACCAT

BS15737.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:12:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RF 1098 CG31522-PF 1..1098 17..1114 5490 100 Plus
CG31522-RB 1098 CG31522-PB 1..1098 17..1114 5490 100 Plus
CG31522-RD 1098 CG31522-PD 1..1098 17..1114 5490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:12:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-RF 2883 CG31522-RF 454..1551 17..1114 5490 100 Plus
CG31522-RB 2216 CG31522-RB 322..1419 17..1114 5490 100 Plus
CG31522-RD 2760 CG31522-RD 331..1428 17..1114 5490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4442747..4443056 1114..805 1550 100 Minus
3R 32079331 3R 4443902..4444058 805..649 785 100 Minus
3R 32079331 3R 4444110..4444249 651..512 700 100 Minus
3R 32079331 3R 7982801..7983135 695..361 625 79.1 Minus
3R 32079331 3R 4446412..4446534 278..156 570 97.6 Minus
3R 32079331 3R 4444319..4444428 515..406 550 100 Minus
3R 32079331 3R 4446737..4446823 160..74 435 100 Minus
3R 32079331 3R 4445332..4445417 349..264 430 100 Minus
3R 32079331 3R 4467642..4467766 639..515 325 84 Minus
3R 32079331 3R 4444506..4444563 406..349 290 100 Minus
3R 32079331 3R 4447701..4447758 74..17 290 100 Minus
3R 32079331 3R 22555685..22555806 550..671 235 79.5 Plus
3R 32079331 3R 22559608..22559737 651..522 230 78.5 Minus
3R 32079331 3R 22532970..22533076 648..542 205 79.4 Minus
Blast to na_te.dros performed on 2014-11-28 01:12:01 has no hits.

BS15737.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:23 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RB 1..1098 17..1114 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:51 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RB 313..1417 9..1114 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:41:59 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RD 331..1426 17..1112 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:23 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RB 313..1417 9..1114 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:47:18 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
CG31522-RD 331..1426 17..1112 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:47:18 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4442749..4443055 806..1112 100 <- Minus
3R 4443902..4444057 650..805 100 <- Minus
3R 4444112..4444248 513..649 100 <- Minus
3R 4444322..4444427 407..512 100 <- Minus
3R 4444506..4444562 350..406 100 <- Minus
3R 4445332..4445415 266..349 100 <- Minus
3R 4446425..4446532 158..265 100 <- Minus
3R 4446740..4446822 75..157 100 <- Minus
3R 4447701..4447758 17..74 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:41:59 Download gff for BS15737.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 272462..272544 75..157 100 <- Minus
arm_3R 273423..273480 17..74 100   Minus
arm_3R 268471..268777 806..1112 100 <- Minus
arm_3R 269624..269779 650..805 100 <- Minus
arm_3R 269834..269970 513..649 100 <- Minus
arm_3R 270044..270149 407..512 100 <- Minus
arm_3R 270228..270284 350..406 100 <- Minus
arm_3R 271054..271137 266..349 100 <- Minus
arm_3R 272147..272254 158..265 100 <- Minus

BS15737.pep Sequence

Translation from 16 to 1113

> BS15737.pep
MALIMKYIDSISRYMDSHSDSRTKGWPMMSSPFPTLAVCLTYVYLVKVLG
PRLMENRKPLNLQNTLVMYNAIQVVFSAWLFYEIGISGWLTGHYSFRCQP
VDYSNNPRTLRMVHACWWYYFSKFTEFMDTIFFVLRKKSSQVTTLHVIHH
GCMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYMFSAMGPQYQKYL
WWKKYLTTLQMVQFILIMVHAFQLLFIDCNYPKAFVWWIGMHAVMFFFLF
NEFYKAAYRSRMMKKNGALANGHAKPNGYCKSINAHDDLAMPQTTEATAT
ATPASKANGSSTPPSNGHANGVENVYKQVANGSAHKGSNGGLSNGYATKL
LDDASQELKQRKTPK*

BS15737.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31522-PF 365 CG31522-PF 1..365 1..365 1987 100 Plus
CG31522-PB 365 CG31522-PB 1..365 1..365 1987 100 Plus
CG31522-PD 365 CG31522-PD 1..365 1..365 1987 100 Plus
CG31522-PI 392 CG31522-PI 1..392 1..365 1949 93.1 Plus
CG31522-PH 364 CG31522-PH 1..364 1..365 1904 96.4 Plus