Clone BS15741 Report

Search the DGRC for BS15741

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptAldh-III-RI
Protein status:BS15741.pep: full length peptide match
Sequenced Size:1529

Clone Sequence Records

BS15741.complete Sequence

1529 bp assembled on 2009-12-07

GenBank Submission: KX800619

> BS15741.complete
GAAGTTATCAGTCGACATGGCCAATTTTGACGATACGTTGCAACGCGCCC
GCCTTGCCTTTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAG
CAGCTGGAGAATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCAT
CAGCGCCTTGGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCG
TGGAAACGGAATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTC
GACGAGTGGGTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGAT
GGACGACGTCCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCG
GCGCCTGGAACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCC
ATCGCCGCCGGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAA
CTGCGCCAAGTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATT
GCTATCCAGTTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAAC
CAGCGTTTCGACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGAT
TATCCACGCCGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGG
GTGGCAAAAGCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCG
GTCAAGCGCATCCTGTGGGGCAAGCTGATTAACTGCGGACAGACCTGCAT
CGCTCCGGACTACATCCTCTGCTCCAAGGAGGTGCAGGAGAAGTTCATCG
TGGAGGCCAAGGACGTGCTGAAGGAATGGTACGGCGAGAATATCCAGAGC
AGTCCGGATCTAAGCCGTGTGATCAACGCCAACAACTTCCAGCGCCTTCT
TGGCCTAATGAAGTCCGGCCGCGTGGCCGTCGGAGGTAACTACGATGCCA
GCGAGCGTTTCATCGAACCCACCATCTTGGTGGACGTGAAGGAGACCGAT
CCCATCATGGAGGAGGAGATCTTCGGCCCCATCTTGCCCATCTTCAATGT
GGAGAGTGCCTACGATGCCATCAAGTTCATCAATGCCAGAGAGAGTCCAC
TTGTCCTGTACATTTTCACGCCGACAGCAGAGGTTCAGAATCTGTTCATA
AACGGCACCCAGTCGGGCGGACTGTGCGTGAACGACACGATAATGCACTA
TGCCGTTGATGTGCTGCCCTTCGGAGGCGTCGGCATGAGCGGCATGGGCA
GATATCATGGAAAGTACGGCTTCGAGACCTTCACGCACAAGAAATCTTGC
CTGGGCAAGGACTTATCCCCGTTGGGCGAGAAGTTGTCATCAGCTCGGTA
CCCACCCTACTCGGACCGCAAGGGATCGCTGCTCTCGTTCCTGCTGCGCA
AGCGCCGTCCGCTGCCCAACCTGCATCTGAGCCACGTGCTGGCCATCGGA
CTGGGAGTCGGATTGACGGTGCTGACCAACTACTACCTACAGGGCAAGCT
GTTGTCGAAGTAGAAGCTTTCTAGACCAT

BS15741.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RN 1692 CG11140-PN 196..1692 17..1513 7485 100 Plus
Aldh-III-RM 1497 CG11140-PM 1..1497 17..1513 7485 100 Plus
Aldh-III-RL 1497 CG11140-PL 1..1497 17..1513 7485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RN 2352 CG11140-RN 439..1937 17..1515 7495 100 Plus
Aldh-III-RM 2052 CG11140-RM 139..1637 17..1515 7495 100 Plus
Aldh-III-RL 2144 CG11140-RL 231..1729 17..1515 7495 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7469614..7469847 892..659 1170 100 Minus
2R 25286936 2R 7470393..7470617 497..273 1125 100 Minus
2R 25286936 2R 7469360..7469557 1089..892 990 100 Minus
2R 25286936 2R 7470702..7470883 274..93 910 100 Minus
2R 25286936 2R 7469909..7470072 660..497 820 100 Minus
2R 25286936 2R 7467482..7467633 1493..1342 760 100 Minus
2R 25286936 2R 7467691..7467827 1341..1205 685 100 Minus
2R 25286936 2R 7469110..7469227 1205..1088 590 100 Minus
2R 25286936 2R 7473288..7473346 93..35 295 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:28:00 has no hits.

BS15741.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:50:20 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RL 214..1710 17..1513 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:51 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RL 231..1727 17..1513 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:17:36 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RB 401..1589 17..1205 100 -> Plus
Aldh-III-RB 1779..2086 1206..1513 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:12:02 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RL 231..1727 17..1513 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:12:02 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7470394..7470615 275..496 100 <- Minus
2R 7470702..7470882 94..274 100 <- Minus
2R 7473288..7473346 35..93 100 <- Minus
2R 7473722..7473739 17..34 100   Minus
2R 7469909..7470072 497..660 100 <- Minus
2R 7467296..7467316 1493..1513 100 <- Minus
2R 7467483..7467633 1342..1492 100 <- Minus
2R 7467691..7467826 1206..1341 100 <- Minus
2R 7469110..7469225 1090..1205 100 <- Minus
2R 7469360..7469557 892..1089 100 <- Minus
2R 7469615..7469845 661..891 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:51 Download gff for BS15741.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3354801..3354821 1493..1513 100 <- Minus
arm_2R 3354988..3355138 1342..1492 100 <- Minus
arm_2R 3355196..3355331 1206..1341 100 <- Minus
arm_2R 3356615..3356730 1090..1205 100 <- Minus
arm_2R 3356865..3357062 892..1089 100 <- Minus
arm_2R 3357120..3357350 661..891 100 <- Minus
arm_2R 3357414..3357577 497..660 100 <- Minus
arm_2R 3357899..3358120 275..496 100 <- Minus
arm_2R 3358207..3358387 94..274 100 <- Minus
arm_2R 3360793..3360851 35..93 100 <- Minus
arm_2R 3361227..3361244 17..34 100   Minus

BS15741.3prime Sequence

907 bp (758 high quality bases) assembled on 2006-12-21

> BS15741.3prime
ATGGTCTAGAAAGCTTCTACTTTGACAACAGCTTGCCCTGTAGGTAGTAG
TTGGTCAGCACCGTCAATCCGACTCCCAGTCCGATGGCCAGCACGTGGCT
CAGATGCAGGTTGGGCAGCGGACGGCGCTTGCGCAGCAGGAACGAGAGCA
GCGATCCCTTGCGGTCCGAGTAGGGTGGGTACCGAGCTGATGACAACTTC
TCGCCCAACGGGGATAAGTCCTTGCCCAGGCAAGATTTCTTGTGCGTGAA
GGTCTCGAAGCCGTACTTTCCATGATATCTGCCCATGCCGCTCATGCCGA
CGCCTCCGAAGGGCAGCACATCAACGGCATAGTGCATTATCGTGTCGTTC
ACGCACAGTCCGCCCGACTGGGTGCCGTTTATGAACAGATTCTGAACCTC
TGCTGTCGGCGTGAAAATGTACAGGACAAGTGGACTCTCTCTGGCATTGA
TGAACTTGATGGCATCGTAGGCACTCTCCACATTGAAGATGGGCAAGATG
GGGCCGAAGATCTCCTCCTCCATGATGGGATCGGTCTCCTTCACGTCCAC
CAAGATGGTGGGTTCGATGAAACGCTCGCTGGCATCGTAGTTACCTCCGA
CGGCCACGCGGCCGGACTTCATTAGGCCAAGAAGGCGCTGGAAGTTGTTG
GCGTTGATCACACGGCTTAGATCCGGACTGCTCTGGATATTCTCGCCGTA
CCATTCCTTCAGCACGTCCTTGGCCTCCACGATGAACTTCTCCTGCACCT
CCTTGGAGCAGAGGATGTAGTCCGGAGCGATGCAAGTCTGTCCGCAGTTA
ATCAGCTTGCCCCACAGGATGCGCTTGACCGCAGTGCGCATGTCCACAGA
TTTGTCAATGTAGCAGGGGCTTTTGCCACCCAGCTCCAAGGTGGTGGGGG
TCAAGTA

BS15741.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG11140-PI 1497 Aldh-III-RI 607..1497 907..17 4405 99.7 Minus
CG11140-PG 1881 Aldh-III-RG 802..1384 907..325 2890 99.8 Minus
CG11140-PC 1686 Aldh-III-RC 607..1189 907..325 2890 99.8 Minus
CG11140-PB 1686 Aldh-III-RB 607..1189 907..325 2890 99.8 Minus
CG11140-PA 1686 Aldh-III-RA 607..1189 907..325 2890 99.8 Minus
CG11140-PD 1686 Aldh-III-RD 607..1189 907..325 2890 99.8 Minus
CG11140-PF 1881 Aldh-III-RF 802..1384 907..325 2890 99.8 Minus
CG11140-PE 1494 Aldh-III-RE 607..1076 907..438 2325 99.7 Minus
CG11140-PG 1881 Aldh-III-RG 1573..1881 325..17 1520 99.6 Minus
CG11140-PC 1686 Aldh-III-RC 1378..1686 325..17 1520 99.6 Minus
CG11140-PB 1686 Aldh-III-RB 1378..1686 325..17 1520 99.6 Minus
CG11140-PA 1686 Aldh-III-RA 1378..1686 325..17 1520 99.6 Minus
CG11140-PD 1686 Aldh-III-RD 1378..1686 325..17 1520 99.6 Minus
CG11140-PF 1881 Aldh-III-RF 1573..1881 325..17 1520 99.6 Minus
CG11140-PE 1494 Aldh-III-RE 1189..1476 325..38 1440 100 Minus
CG11140-PH 1515 Aldh-III-RH 1210..1497 325..38 1440 100 Minus
CG11140-PH 1515 Aldh-III-RH 802..960 907..749 770 99.3 Minus
CG11140-PH 1515 Aldh-III-RH 958..1097 577..438 700 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:06:14
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RN 2352 CG11140-RN 1045..1937 907..15 4435 99.8 Minus
Aldh-III-RM 2052 CG11140-RM 745..1637 907..15 4435 99.8 Minus
Aldh-III-RL 2144 CG11140-RL 837..1729 907..15 4435 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7469614..7469847 638..871 1155 99.6 Plus
2R 25286936 2R 7469360..7469557 441..638 990 100 Plus
2R 25286936 2R 7467482..7467633 37..188 760 100 Plus
2R 25286936 2R 7467691..7467827 189..325 685 100 Plus
2R 25286936 2R 7469110..7469227 325..442 590 100 Plus
2R 25286936 2R 7469909..7469946 870..907 190 100 Plus
Blast to na_te.dros performed on 2015-02-10 15:06:11 has no hits.

BS15741.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:35:58 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11140-PI 608..1497 17..906 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:28 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11140-PI 608..1497 17..906 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 21:24:24 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RL 838..1732 12..906 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:49:47 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RL 838..1732 12..906 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:49:47 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 7467691..7467826 189..324 100 <- Plus
2R 7469110..7469225 325..440 100 <- Plus
2R 7469360..7469557 441..638 100 <- Plus
2R 7469615..7469845 639..869 99 <- Plus
2R 7469909..7469945 870..906 100   Plus
2R 7467291..7467316 12..37 92 <- Plus
2R 7467483..7467633 38..188 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 21:24:24 Download gff for BS15741.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3354988..3355138 38..188 100 <- Plus
arm_2R 3354796..3354821 12..37 92 <- Plus
arm_2R 3355196..3355331 189..324 100 <- Plus
arm_2R 3356615..3356730 325..440 100 <- Plus
arm_2R 3356865..3357062 441..638 100 <- Plus
arm_2R 3357120..3357350 639..869 99 <- Plus
arm_2R 3357414..3357450 870..906 100   Plus

BS15741.5prime Sequence

869 bp (787 high quality bases) assembled on 2006-12-21

> BS15741.5prime
GAAGTTATCAGTCGACATGGCCAATTTTGACGATACGTTGCAACGCGCCC
GCCTTGCCTTTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAG
CAGCTGGAGAATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCAT
CAGCGCCTTGGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCG
TGGAAACGGAATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTC
GACGAGTGGGTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGAT
GGACGACGTCCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCG
GCGCCTGGAACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCC
ATCGCCGCCGGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAA
CTGCGCCAAGTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATT
GCTATCCAGTTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAAC
CAGCGTTTCGACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGAT
TATCCACGCCGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGG
GTGGCAAAAGCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCG
GTCAAGCGCATCCTGTGGGGCAAGCTGATTAACTGCGGACAGACCTGCAT
CGCTCCGGACTACATCCTCTGCTCCAAGGAGGTGCAGGAGAAGTTCATCG
TGGAGGCCAAGGACGTGCTGAAAGAATGGTACGGCGAGAATATCCAGAGC
AGTCCGGATCTAAGCCGTG

BS15741.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG11140-PG 1881 Aldh-III-RG 196..1048 17..869 4240 99.8 Plus
CG11140-PC 1686 Aldh-III-RC 1..853 17..869 4240 99.8 Plus
CG11140-PB 1686 Aldh-III-RB 1..853 17..869 4240 99.8 Plus
CG11140-PI 1497 Aldh-III-RI 1..853 17..869 4240 99.8 Plus
CG11140-PA 1686 Aldh-III-RA 1..853 17..869 4240 99.8 Plus
CG11140-PD 1686 Aldh-III-RD 1..853 17..869 4240 99.8 Plus
CG11140-PE 1494 Aldh-III-RE 1..853 17..869 4240 99.8 Plus
CG11140-PF 1881 Aldh-III-RF 196..1048 17..869 4240 99.8 Plus
CG11140-PH 1515 Aldh-III-RH 196..960 17..781 3825 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-31 03:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RU 2115 CG11140-RU 193..1045 17..869 4250 99.9 Plus
Aldh-III-RQ 2923 CG11140-RQ 1180..2032 17..869 4250 99.9 Plus
Aldh-III-RS 2233 CG11140-RS 320..1172 17..869 4250 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-31 03:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7470393..7470617 497..273 1125 100 Minus
2R 25286936 2R 7469637..7469847 869..659 1040 99.5 Minus
2R 25286936 2R 7470702..7470883 274..93 910 100 Minus
2R 25286936 2R 7469909..7470072 660..497 820 100 Minus
2R 25286936 2R 7473288..7473346 93..35 295 100 Minus
Blast to na_te.dros performed 2015-01-31 03:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
BS3 1790 BS3 BS3 1790bp 202..237 424..459 108 77.8 Plus

BS15741.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:00 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11140-PI 1..853 17..869 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:15:30 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11140-PG 187..1048 8..869 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-06 20:51:33 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RT 184..1045 8..869 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-31 05:23:57 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RS 311..1172 8..869 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-31 05:23:57 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 7470702..7470882 94..274 100 <- Minus
2R 7469637..7469845 661..869 99 <- Minus
2R 7469909..7470072 497..660 100 <- Minus
2R 7470394..7470615 275..496 100 <- Minus
2R 7473288..7473346 35..93 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-06 20:51:33 Download gff for BS15741.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3357142..3357350 661..869 99 <- Minus
arm_2R 3357414..3357577 497..660 100 <- Minus
arm_2R 3357899..3358120 275..496 100 <- Minus
arm_2R 3358207..3358387 94..274 100 <- Minus
arm_2R 3360793..3360851 35..93 100 <- Minus

BS15741.pep Sequence

Translation from 16 to 1512

> BS15741.pep
MANFDDTLQRARLAFSSGKTRNVSFRRKQLENLLRCYEEHENEIISALEA
DLRRPKQESLIVETEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQI
YNDPFGVVLVIGAWNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFI
ADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIFYTGSTRVGKIIHAAA
NKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYI
LCSKEVQEKFIVEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGLMKS
GRVAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNVESAYD
AIKFINARESPLVLYIFTPTAEVQNLFINGTQSGGLCVNDTIMHYAVDVL
PFGGVGMSGMGRYHGKYGFETFTHKKSCLGKDLSPLGEKLSSARYPPYSD
RKGSLLSFLLRKRRPLPNLHLSHVLAIGLGVGLTVLTNYYLQGKLLSK*

BS15741.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:04:37
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-PN 563 CG11140-PN 66..563 1..498 2596 100 Plus
Aldh-III-PM 498 CG11140-PM 1..498 1..498 2596 100 Plus
Aldh-III-PL 498 CG11140-PL 1..498 1..498 2596 100 Plus
Aldh-III-PK 498 CG11140-PK 1..498 1..498 2596 100 Plus
Aldh-III-PI 498 CG11140-PI 1..498 1..498 2596 100 Plus