Clone BS15759 Report

Search the DGRC for BS15759

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG17333-RA
Protein status:BS15759.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15759.3prime Sequence

762 bp (755 high quality bases) assembled on 2006-12-21

> BS15759.3prime
ATGGTCTAGAAAGCTTTCACTTTAAGGTTTCAATTTCTTTTCCAGCACCC
GCGTCCACAATCAATGTCAACTGCCCTTTGGTCGGATTCACCCACCCAGC
GGGAAACTTCTTGTCCAGATCGACAAACACACTCTTGACGACACTGGCTT
TTGCGGCGCCCGTAACCACGAAGGCGACATTCCGTGCCTTATTGATCAGC
GGCAGGGTGAAAGTGATCCGCTCGGGAGGCGGCTTGGGCGAGTTCCGGAT
GGGGATAACCAGGCGCTTGGTCTCCTGCAGGGTGGCTGGCTGCTCGGGAA
AGAGGGAGCAGGTGTGGCCATCGGGTCCCATGCCAAGCAGCAGCAGATCG
AAGCGATCGACTTGACTTTTGACCTTCGCCTCGTAATCTGCGGCGCAGGC
GTCCAGCGGTTGGCTGGTATCGGCGCGGACGAACTGGGATTCCTGGATGC
AGGGCAATTGGGTTAGCCACTCGGCCCTGTAGGCACCATAGGTGGAATCG
CTGTCATCCAGGCGAACATACCGCTCGTCACAGAAGAAAAACACCCATTT
GGCCGTTTTTAAGTTGCACGATTTCAGGGCTTTCGTTAGCAACTGGACGA
GGGAACCACCCGAAAGTCCCACGCTGAACTTATCATGTTTGGCCAGCGCC
TCCTGGGAGCAGCGCTGGAGAAGATCGCCCAGGGCCTGGACAAGTTGCTC
CTCCGAAGCGGACGGGATTACTTTTAGCGCACCCTTTTTCTCCGACATGT
CGACTGATAACT

BS15759.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-PA 732 CG17333-RA 1..728 748..21 3615 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:40:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-RA 847 CG17333-RA 63..794 748..17 3630 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10847769..10848245 610..134 2385 100 Minus
X 23542271 X 10847500..10847640 748..608 705 100 Minus
X 23542271 X 10848363..10848481 135..17 565 98.3 Minus
Blast to na_te.dros performed on 2015-01-30 16:40:53 has no hits.

BS15759.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:32 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-PA 1..732 17..748 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:12 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-PA 1..732 17..748 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:52:09 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 53..801 8..758 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:09:17 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 53..801 8..758 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:09:17 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
X 10847490..10847638 610..758 97 -> Minus
X 10847770..10848245 134..609 100 -> Minus
X 10848365..10848488 8..133 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:52:09 Download gff for BS15759.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10741523..10741671 610..758 97 -> Minus
arm_X 10741803..10742278 134..609 100 -> Minus
arm_X 10742398..10742521 8..133 95   Minus

BS15759.5prime Sequence

762 bp (669 high quality bases) assembled on 2006-12-21

> BS15759.5prime
GAAGTTATCAGTCGACATGTCGGAGAAAAAGGGTGCGCTAAAAGTAATCC
CGTCCGCTTCGGAGGAGCAACTTGTCCAGGCCCTGGGCGATCTTCTCCAG
CGCTGCTCCCAGGAGGCGCTGGCCAAACATGATAAGTTCAGCGTGGGACT
TTCGGGTGGTTCCCTCGTCCAGTTGCTAACGAAAGCCCTGAAATCGTGCA
ACTTAAAAACGGCCAAATGGGTGTTTTTCTTCTGTGACGAGCGGTATGTT
CGCCTGGATGACAGCGATTCCACCTATGGTGCCTACAGGGCCGAGTGGCT
AACCCAATTGCCCTGCATCCAGGAATCCCAGTTCGTCCGCGCCGATACCA
GCCAACCGCTGGACGCCTGCGCCGCAGATTACGAGGCGAAGGTCAAAAGT
CAAGTCGATCGCTTCGATCTGCTGCTGCTTGGCATGGGACCCGATGGCCA
CACCTGCTCCCTCTTTCCCGAGCAGCCAGCCACCCTGCAGGAGACCAAGC
GCCTGGTTATCCCCATCCGGAACTCGCCCAAGCCGCCTCCCGAGCGGATC
ACTTTCACCCTGCCGCTGATCAATAAGGCACGGAATGTCGCCTTCGTGGT
TACGGGCGCCGCAAAAGCCAGTGTCGTCAAGAGTGTGTTTGTCGATCTGG
ACAAGAAGTTTCCCGCTGCGTGGGTGAATCCGACCAAAGGGCAGTTGACA
TTGATTGTGGACGCGGGTGCTGGAAAAGAAATTGAAACCTTAAAATGAAA
GCTTTCTAGACC

BS15759.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-PA 732 CG17333-RA 1..732 17..748 3660 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-RA 847 CG17333-RA 63..794 17..748 3660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:21:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10847769..10848245 155..631 2385 100 Plus
X 23542271 X 10847500..10847640 17..157 705 100 Plus
X 23542271 X 10848363..10848481 630..748 595 100 Plus
Blast to na_te.dros performed on 2015-01-30 12:21:13 has no hits.

BS15759.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:33 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-PA 1..732 17..748 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:14 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-PA 1..732 17..748 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:35:09 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 53..801 7..757 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 13:59:57 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 53..801 7..757 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 13:59:57 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10847490..10847638 7..155 97 -> Plus
X 10847770..10848245 156..631 100 -> Plus
X 10848365..10848488 632..757 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:35:09 Download gff for BS15759.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10741523..10741671 7..155 97 -> Plus
arm_X 10741803..10742278 156..631 100 -> Plus
arm_X 10742398..10742521 632..757 96   Plus

BS15759.complete Sequence

764 bp assembled on 2006-11-29

GenBank Submission: FJ637960

> BS15759.complete
GAAGTTATCAGTCGACATGTCGGAGAAAAAGGGTGCGCTAAAAGTAATCC
CGTCCGCTTCGGAGGAGCAACTTGTCCAGGCCCTGGGCGATCTTCTCCAG
CGCTGCTCCCAGGAGGCGCTGGCCAAACATGATAAGTTCAGCGTGGGACT
TTCGGGTGGTTCCCTCGTCCAGTTGCTAACGAAAGCCCTGAAATCGTGCA
ACTTAAAAACGGCCAAATGGGTGTTTTTCTTCTGTGACGAGCGGTATGTT
CGCCTGGATGACAGCGATTCCACCTATGGTGCCTACAGGGCCGAGTGGCT
AACCCAATTGCCCTGCATCCAGGAATCCCAGTTCGTCCGCGCCGATACCA
GCCAACCGCTGGACGCCTGCGCCGCAGATTACGAGGCGAAGGTCAAAAGT
CAAGTCGATCGCTTCGATCTGCTGCTGCTTGGCATGGGACCCGATGGCCA
CACCTGCTCCCTCTTTCCCGAGCAGCCAGCCACCCTGCAGGAGACCAAGC
GCCTGGTTATCCCCATCCGGAACTCGCCCAAGCCGCCTCCCGAGCGGATC
ACTTTCACCCTGCCGCTGATCAATAAGGCACGGAATGTCGCCTTCGTGGT
TACGGGCGCCGCAAAAGCCAGTGTCGTCAAGAGTGTGTTTGTCGATCTGG
ACAAGAAGTTTCCCGCTGCGTGGGTGAATCCGACCAAAGGGCAGTTGACA
TTGATTGTGGACGCGGGTGCTGGAAAAGAAATTGAAACCTTAAAATGAAA
GCTTTCTAGACCAT

BS15759.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-RA 732 CG17333-PA 1..732 17..748 3660 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-RA 847 CG17333-RA 63..794 17..748 3660 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10847769..10848245 155..631 2385 100 Plus
X 23542271 X 10847500..10847640 17..157 705 100 Plus
X 23542271 X 10848363..10848481 630..748 595 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:53:34 has no hits.

BS15759.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:08 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 1..732 17..748 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:36 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 1..732 17..748 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:26 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 63..787 17..741 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:10 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 1..732 17..748 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:56 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
CG17333-RA 63..787 17..741 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:56 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
X 10847500..10847638 17..155 100 -> Plus
X 10847770..10848245 156..631 100 -> Plus
X 10848365..10848474 632..741 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:26 Download gff for BS15759.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10741533..10741671 17..155 100 -> Plus
arm_X 10741803..10742278 156..631 100 -> Plus
arm_X 10742398..10742507 632..741 100   Plus

BS15759.pep Sequence

Translation from 16 to 747

> BS15759.pep
MSEKKGALKVIPSASEEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSL
VQLLTKALKSCNLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPC
IQESQFVRADTSQPLDACAADYEAKVKSQVDRFDLLLLGMGPDGHTCSLF
PEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAK
ASVVKSVFVDLDKKFPAAWVNPTKGQLTLIVDAGAGKEIETLK*

BS15759.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG17333-PA 243 CG17333-PA 1..243 1..243 1246 100 Plus