Clone Sequence Records
BS15759.3prime Sequence
762 bp (755 high quality bases) assembled on 2006-12-21
> BS15759.3prime
ATGGTCTAGAAAGCTTTCACTTTAAGGTTTCAATTTCTTTTCCAGCACCC
GCGTCCACAATCAATGTCAACTGCCCTTTGGTCGGATTCACCCACCCAGC
GGGAAACTTCTTGTCCAGATCGACAAACACACTCTTGACGACACTGGCTT
TTGCGGCGCCCGTAACCACGAAGGCGACATTCCGTGCCTTATTGATCAGC
GGCAGGGTGAAAGTGATCCGCTCGGGAGGCGGCTTGGGCGAGTTCCGGAT
GGGGATAACCAGGCGCTTGGTCTCCTGCAGGGTGGCTGGCTGCTCGGGAA
AGAGGGAGCAGGTGTGGCCATCGGGTCCCATGCCAAGCAGCAGCAGATCG
AAGCGATCGACTTGACTTTTGACCTTCGCCTCGTAATCTGCGGCGCAGGC
GTCCAGCGGTTGGCTGGTATCGGCGCGGACGAACTGGGATTCCTGGATGC
AGGGCAATTGGGTTAGCCACTCGGCCCTGTAGGCACCATAGGTGGAATCG
CTGTCATCCAGGCGAACATACCGCTCGTCACAGAAGAAAAACACCCATTT
GGCCGTTTTTAAGTTGCACGATTTCAGGGCTTTCGTTAGCAACTGGACGA
GGGAACCACCCGAAAGTCCCACGCTGAACTTATCATGTTTGGCCAGCGCC
TCCTGGGAGCAGCGCTGGAGAAGATCGCCCAGGGCCTGGACAAGTTGCTC
CTCCGAAGCGGACGGGATTACTTTTAGCGCACCCTTTTTCTCCGACATGT
CGACTGATAACT
BS15759.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-PA | 732 | CG17333-RA | 1..728 | 748..21 | 3615 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:40:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-RA | 847 | CG17333-RA | 63..794 | 748..17 | 3630 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:40:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10847769..10848245 | 610..134 | 2385 | 100 | Minus |
X | 23542271 | X | 10847500..10847640 | 748..608 | 705 | 100 | Minus |
X | 23542271 | X | 10848363..10848481 | 135..17 | 565 | 98.3 | Minus |
Blast to na_te.dros performed on 2015-01-30 16:40:53 has no hits.
BS15759.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:32 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-PA | 1..732 | 17..748 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:12 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-PA | 1..732 | 17..748 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:52:09 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 53..801 | 8..758 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:09:17 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 53..801 | 8..758 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:09:17 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10847490..10847638 | 610..758 | 97 | -> | Minus |
X | 10847770..10848245 | 134..609 | 100 | -> | Minus |
X | 10848365..10848488 | 8..133 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:52:09 Download gff for
BS15759.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10741523..10741671 | 610..758 | 97 | -> | Minus |
arm_X | 10741803..10742278 | 134..609 | 100 | -> | Minus |
arm_X | 10742398..10742521 | 8..133 | 95 | | Minus |
BS15759.5prime Sequence
762 bp (669 high quality bases) assembled on 2006-12-21
> BS15759.5prime
GAAGTTATCAGTCGACATGTCGGAGAAAAAGGGTGCGCTAAAAGTAATCC
CGTCCGCTTCGGAGGAGCAACTTGTCCAGGCCCTGGGCGATCTTCTCCAG
CGCTGCTCCCAGGAGGCGCTGGCCAAACATGATAAGTTCAGCGTGGGACT
TTCGGGTGGTTCCCTCGTCCAGTTGCTAACGAAAGCCCTGAAATCGTGCA
ACTTAAAAACGGCCAAATGGGTGTTTTTCTTCTGTGACGAGCGGTATGTT
CGCCTGGATGACAGCGATTCCACCTATGGTGCCTACAGGGCCGAGTGGCT
AACCCAATTGCCCTGCATCCAGGAATCCCAGTTCGTCCGCGCCGATACCA
GCCAACCGCTGGACGCCTGCGCCGCAGATTACGAGGCGAAGGTCAAAAGT
CAAGTCGATCGCTTCGATCTGCTGCTGCTTGGCATGGGACCCGATGGCCA
CACCTGCTCCCTCTTTCCCGAGCAGCCAGCCACCCTGCAGGAGACCAAGC
GCCTGGTTATCCCCATCCGGAACTCGCCCAAGCCGCCTCCCGAGCGGATC
ACTTTCACCCTGCCGCTGATCAATAAGGCACGGAATGTCGCCTTCGTGGT
TACGGGCGCCGCAAAAGCCAGTGTCGTCAAGAGTGTGTTTGTCGATCTGG
ACAAGAAGTTTCCCGCTGCGTGGGTGAATCCGACCAAAGGGCAGTTGACA
TTGATTGTGGACGCGGGTGCTGGAAAAGAAATTGAAACCTTAAAATGAAA
GCTTTCTAGACC
BS15759.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-PA | 732 | CG17333-RA | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 12:21:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-RA | 847 | CG17333-RA | 63..794 | 17..748 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 12:21:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10847769..10848245 | 155..631 | 2385 | 100 | Plus |
X | 23542271 | X | 10847500..10847640 | 17..157 | 705 | 100 | Plus |
X | 23542271 | X | 10848363..10848481 | 630..748 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 12:21:13 has no hits.
BS15759.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:33 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-PA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:14 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-PA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 09:35:09 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 53..801 | 7..757 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 13:59:57 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 53..801 | 7..757 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 13:59:57 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10847490..10847638 | 7..155 | 97 | -> | Plus |
X | 10847770..10848245 | 156..631 | 100 | -> | Plus |
X | 10848365..10848488 | 632..757 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 09:35:09 Download gff for
BS15759.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10741523..10741671 | 7..155 | 97 | -> | Plus |
arm_X | 10741803..10742278 | 156..631 | 100 | -> | Plus |
arm_X | 10742398..10742521 | 632..757 | 96 | | Plus |
BS15759.complete Sequence
764 bp assembled on 2006-11-29
GenBank Submission: FJ637960
> BS15759.complete
GAAGTTATCAGTCGACATGTCGGAGAAAAAGGGTGCGCTAAAAGTAATCC
CGTCCGCTTCGGAGGAGCAACTTGTCCAGGCCCTGGGCGATCTTCTCCAG
CGCTGCTCCCAGGAGGCGCTGGCCAAACATGATAAGTTCAGCGTGGGACT
TTCGGGTGGTTCCCTCGTCCAGTTGCTAACGAAAGCCCTGAAATCGTGCA
ACTTAAAAACGGCCAAATGGGTGTTTTTCTTCTGTGACGAGCGGTATGTT
CGCCTGGATGACAGCGATTCCACCTATGGTGCCTACAGGGCCGAGTGGCT
AACCCAATTGCCCTGCATCCAGGAATCCCAGTTCGTCCGCGCCGATACCA
GCCAACCGCTGGACGCCTGCGCCGCAGATTACGAGGCGAAGGTCAAAAGT
CAAGTCGATCGCTTCGATCTGCTGCTGCTTGGCATGGGACCCGATGGCCA
CACCTGCTCCCTCTTTCCCGAGCAGCCAGCCACCCTGCAGGAGACCAAGC
GCCTGGTTATCCCCATCCGGAACTCGCCCAAGCCGCCTCCCGAGCGGATC
ACTTTCACCCTGCCGCTGATCAATAAGGCACGGAATGTCGCCTTCGTGGT
TACGGGCGCCGCAAAAGCCAGTGTCGTCAAGAGTGTGTTTGTCGATCTGG
ACAAGAAGTTTCCCGCTGCGTGGGTGAATCCGACCAAAGGGCAGTTGACA
TTGATTGTGGACGCGGGTGCTGGAAAAGAAATTGAAACCTTAAAATGAAA
GCTTTCTAGACCAT
BS15759.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-RA | 732 | CG17333-PA | 1..732 | 17..748 | 3660 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-RA | 847 | CG17333-RA | 63..794 | 17..748 | 3660 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10847769..10848245 | 155..631 | 2385 | 100 | Plus |
X | 23542271 | X | 10847500..10847640 | 17..157 | 705 | 100 | Plus |
X | 23542271 | X | 10848363..10848481 | 630..748 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:53:34 has no hits.
BS15759.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:32:08 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:04:36 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:26 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 63..787 | 17..741 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:32:10 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 1..732 | 17..748 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:56 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17333-RA | 63..787 | 17..741 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:56 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10847500..10847638 | 17..155 | 100 | -> | Plus |
X | 10847770..10848245 | 156..631 | 100 | -> | Plus |
X | 10848365..10848474 | 632..741 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:26 Download gff for
BS15759.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10741533..10741671 | 17..155 | 100 | -> | Plus |
arm_X | 10741803..10742278 | 156..631 | 100 | -> | Plus |
arm_X | 10742398..10742507 | 632..741 | 100 | | Plus |
BS15759.pep Sequence
Translation from 16 to 747
> BS15759.pep
MSEKKGALKVIPSASEEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSL
VQLLTKALKSCNLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPC
IQESQFVRADTSQPLDACAADYEAKVKSQVDRFDLLLLGMGPDGHTCSLF
PEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAK
ASVVKSVFVDLDKKFPAAWVNPTKGQLTLIVDAGAGKEIETLK*
BS15759.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:23:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17333-PA | 243 | CG17333-PA | 1..243 | 1..243 | 1246 | 100 | Plus |