Clone Sequence Records
BS15768.3prime Sequence
348 bp (348 high quality bases) assembled on 2006-12-21
> BS15768.3prime
ATGGTCTAGAAAGCTTCTACTTGTTTGACTTGAGGAAGGCAATCAAATCG
GCCCGCTCCTCAGCCTTTTTAAGACCTGCGAACACCATCTTTGTTCCGGG
AATGTATTTCTTCGGGTCCTTGAGGTACTCGTCCAAATTCCCCTCTGTCC
AGGTAACGCCCTTCTTTATATTGGCATCGGTATACTTGTATCCCGCTGCT
GTGCCACACTTGCGACCCACGACCCCGCCAAGATTTGGGCCCACCTTGTG
TTTGCCGCCCACTTCGTAGGTGTGGCACTGGGCGCACTTCTGCACAAATA
TCTTCTTGCCGTTCTCTGCATCACCAGAACCCATGTCGACTGATAACT
BS15768.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13263-PA | 318 | Cyt-c-d-RA | 1..318 | 334..17 | 1590 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..586 | 334..15 | 1600 | 100 | Minus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..656 | 334..15 | 1600 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:42:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719454 | 334..15 | 1600 | 100 | Minus |
Blast to na_te.dros performed on 2015-01-30 16:42:05 has no hits.
BS15768.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:54 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..334 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:37 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..334 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:52:23 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..662 | 8..334 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:09:30 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..662 | 8..334 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:09:30 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719460 | 8..334 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:52:23 Download gff for
BS15768.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719460 | 8..334 | 98 | | Minus |
BS15768.5prime Sequence
348 bp (348 high quality bases) assembled on 2006-12-21
> BS15768.5prime
GAAGTTATCAGTCGACATGGGTTCTGGTGATGCAGAGAACGGCAAGAAGA
TATTTGTGCAGAAGTGCGCCCAGTGCCACACCTACGAAGTGGGCGGCAAA
CACAAGGTGGGCCCAAATCTTGGCGGGGTCGTGGGTCGCAAGTGTGGCAC
AGCAGCGGGATACAAGTATACCGATGCCAATATAAAGAAGGGCGTTACCT
GGACAGAGGGGAATTTGGACGAGTACCTCAAGGACCCGAAGAAATACATT
CCCGGAACAAAGATGGTGTTCGCAGGTCTTAAAAAGGCTGAGGAGCGGGC
CGATTTGATTGCCTTCCTCAAGTCAAACAAGTAGAAGCTTTCTAGACC
BS15768.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13263-PA | 318 | Cyt-c-d-RA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 13:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..586 | 17..336 | 1600 | 100 | Plus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..656 | 17..336 | 1600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 13:54:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719454 | 17..336 | 1600 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-02 13:54:24 has no hits.
BS15768.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:36:55 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:38 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13263-PA | 1..318 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-08 14:12:00 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..662 | 17..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:49:46 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..662 | 17..343 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:49:46 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719460 | 17..343 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:12:00 Download gff for
BS15768.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719460 | 17..343 | 98 | | Plus |
BS15768.complete Sequence
350 bp assembled on 2006-11-29
GenBank Submission: FJ638870
> BS15768.complete
GAAGTTATCAGTCGACATGGGTTCTGGTGATGCAGAGAACGGCAAGAAGA
TATTTGTGCAGAAGTGCGCCCAGTGCCACACCTACGAAGTGGGCGGCAAA
CACAAGGTGGGCCCAAATCTTGGCGGGGTCGTGGGTCGCAAGTGTGGCAC
AGCAGCGGGATACAAGTATACCGATGCCAATATAAAGAAGGGCGTTACCT
GGACAGAGGGGAATTTGGACGAGTACCTCAAGGACCCGAAGAAATACATT
CCCGGAACAAAGATGGTGTTCGCAGGTCTTAAAAAGGCTGAGGAGCGGGC
CGATTTGATTGCCTTCCTCAAGTCAAACAAGTAGAAGCTTTCTAGACCAT
BS15768.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 318 | CG13263-PB | 1..318 | 17..334 | 1590 | 100 | Plus |
Cyt-c-d-RA | 318 | CG13263-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:27:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-RB | 767 | CG13263-RB | 267..586 | 17..336 | 1600 | 100 | Plus |
Cyt-c-d-RA | 837 | CG13263-RA | 337..656 | 17..336 | 1600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:27:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16719135..16719454 | 17..336 | 1600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:27:01 has no hits.
BS15768.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:18:31 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 1..318 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:14:47 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 370..695 | 17..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:30 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..654 | 17..334 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:18:31 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 370..695 | 17..343 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:26 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyt-c-d-RA | 337..654 | 17..334 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:26 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16719135..16719452 | 17..334 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:30 Download gff for
BS15768.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16719135..16719452 | 17..334 | 100 | | Plus |
BS15768.pep Sequence
Translation from 16 to 333
> BS15768.pep
MGSGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYK
YTDANIKKGVTWTEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAF
LKSNK*
BS15768.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:54:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyt-c-d-PB | 105 | CG13263-PB | 1..105 | 1..105 | 565 | 100 | Plus |
Cyt-c-d-PA | 105 | CG13263-PA | 1..105 | 1..105 | 565 | 100 | Plus |
Cyt-c-p-PB | 108 | CG17903-PB | 5..105 | 3..103 | 407 | 72.3 | Plus |
Cyt-c-p-PA | 108 | CG17903-PA | 5..105 | 3..103 | 407 | 72.3 | Plus |