Clone BS15775 Report

Search the DGRC for BS15775

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptCG4858-RA
Protein status:BS15775.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS15775.5prime Sequence

813 bp (748 high quality bases) assembled on 2006-12-21

> BS15775.5prime
GAAGTTATCAGTCGACATGCTGGACAAGGTTAAAAATGTTATCGTAGTGC
TATCAGGCAAGGGCGGAGTAGGAAAATCCACAGTGAGCACCCAATTATCG
CTGGCACTGCGAAAAAACGGATTTAAGGTTGGTCTGCTCGATATAGATCT
GTGTGGACCGAGTGTGCCATATCTATTGGGTCTGGAAGGACGGGATATCT
TCCAGTGCGACGATGGATGGGTTCCTGTCTATACAGATGAATCCCAAACC
TTGGCGGTGATGTCCATTGGATTTTTATTGAAGAACCGTGAGGATCCGGT
CATTTGGCGTGGTCCCAAAAAGACCATGATGATCCGGCAGTTCCTCACCG
ACGTCAGGTGGGATGAGCTGGATTACCTAATTATCGATACGCCACCCGGC
ACTTCGGATGAGCACATCACCGTAATGGAGTGCCTGAAGGAGGTTGGTTG
CCACGGAGCCATAATTGTGACCACACCGCAGGAGGTGGCCCTGGACGATG
TACGCAAGGAGATCACCTTCTGCAAGAAGACCGGCATCAATATCCTGGGC
ATCGTCGAGAATATGAGTGGGTTCGTGTGCCCCCATTGCACCTCGTGCAC
CAATATATTCTCGTNCAACGGTGGCGTCTCACTGGCCACTTACGCCCAAG
TACCACATCTAGGAACTCTGCCCATAGATCCCCGTGTTGGCATTTTGGCG
GGCACCACTACGTCCGTCTTGGATGAGCTTCCGGATTCCACGACAGCGGA
GGTGCTGACGCATATAGTTGAGAAAGTGAAAACGATGTTGGTCTCCTAAA
AGCTTTCTAGACC

BS15775.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-PA 783 CG4858-RA 1..783 17..799 3821 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:00:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-RA 950 CG4858-RA 79..862 17..800 3864 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:00:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20526836..20527282 126..572 2235 100 Plus
3L 28110227 3L 20527592..20527822 570..800 1099 98.3 Plus
3L 28110227 3L 20526654..20526766 17..129 565 100 Plus
Blast to na_te.dros performed on 2015-02-12 17:00:31 has no hits.

BS15775.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:10 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-PA 1..783 17..799 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:55 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-PA 1..783 17..799 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 23:31:42 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..862 17..800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:43:55 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..862 17..800 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:43:55 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20526654..20526764 17..127 100 -> Plus
3L 20526838..20527280 128..570 100 -> Plus
3L 20527593..20527822 571..800 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 23:31:42 Download gff for BS15775.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20519754..20519864 17..127 100 -> Plus
arm_3L 20519938..20520380 128..570 100 -> Plus
arm_3L 20520693..20520922 571..800 98   Plus

BS15775.3prime Sequence

813 bp (771 high quality bases) assembled on 2006-12-21

> BS15775.3prime
ATGGTCTAGAAAGCTTTTAGCATACCAACATCGTTTTCAACTTCTCAACT
ATATGCGTCAGCACCTCCGCTGTCGTGGAATCCGGAAGCTCATCCAAGAC
GGACGTAGTGGTGCCCGCCAAAATGCCAACACGGGGATCTATGGGCAGAG
TTCCTAGATGTGGTACTTGGGCGTAAGTGGCCAGTGAGACGCCACCGTTT
GACGAGAATATATTGGTGCACGAGGTGCAATGGGGGCACACGAACCCACT
CATATTCTCGACGATGCCCAGGATATTGATGCCGGTCTTCTTGCAGAAGG
TGATCTCCTTGCGTACATCGTCCAGGGCCACCTCCTGCGGTGTGGTCACA
ATTATGGCTCCGTGGCAACCAACCTCCTTCAGGCACTCCATTACGGTGAT
GTGCTCATCCGAAGTGCCGGGTGGCGTATCGATAATTAGGTAATCCAGCT
CATCCCACCTGACGTCGGTGAGGAACTGCCGGATCATCATGGTCTTTTTG
GGACCACGCCAAATGACCGGATCCTCACGGTTCTTCAATAAAAATCCAAT
GGACATCACCGCCAAGGTTTGGGATTCATCTGTATAGACAGGAACCCATC
CATCGTCGCACTGGAAGATATCCCGTCCTTCCAGACCCAATAGATATGGC
ACACTCGGTCCACACAGATCTATATCGAGCAGACCAACCTTAAATCCGTT
TTTTCGCAGTGCCAGCGATAATTGGGTGCTCACTGTGGATTTTCCTACTC
CGCCCTTGCCTGATAGCACTACGATAACATTTTTAACCTTGTCCAGCATG
TCGACTGATAACT

BS15775.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-PA 783 CG4858-RA 1..776 799..24 3880 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 03:24:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-RA 950 CG4858-RA 79..862 799..16 3890 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 03:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20526836..20527282 690..244 2235 100 Minus
3L 28110227 3L 20527592..20527822 246..16 1125 99.1 Minus
3L 28110227 3L 20526654..20526766 799..687 565 100 Minus
Blast to na_te.dros performed on 2015-01-30 03:24:41 has no hits.

BS15775.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:08 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-PA 1..783 17..799 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:16:54 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-PA 1..783 17..799 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 05:30:54 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..862 16..799 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:10:56 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..862 16..799 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 04:10:56 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20526654..20526764 689..799 100 -> Minus
3L 20526838..20527280 246..688 100 -> Minus
3L 20527593..20527822 16..245 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:30:54 Download gff for BS15775.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20519754..20519864 689..799 100 -> Minus
arm_3L 20519938..20520380 246..688 100 -> Minus
arm_3L 20520693..20520922 16..245 99   Minus

BS15775.complete Sequence

815 bp assembled on 2006-11-29

GenBank Submission: FJ637963

> BS15775.complete
GAAGTTATCAGTCGACATGCTGGACAAGGTTAAAAATGTTATCGTAGTGC
TATCAGGCAAGGGCGGAGTAGGAAAATCCACAGTGAGCACCCAATTATCG
CTGGCACTGCGAAAAAACGGATTTAAGGTTGGTCTGCTCGATATAGATCT
GTGTGGACCGAGTGTGCCATATCTATTGGGTCTGGAAGGACGGGATATCT
TCCAGTGCGACGATGGATGGGTTCCTGTCTATACAGATGAATCCCAAACC
TTGGCGGTGATGTCCATTGGATTTTTATTGAAGAACCGTGAGGATCCGGT
CATTTGGCGTGGTCCCAAAAAGACCATGATGATCCGGCAGTTCCTCACCG
ACGTCAGGTGGGATGAGCTGGATTACCTAATTATCGATACGCCACCCGGC
ACTTCGGATGAGCACATCACCGTAATGGAGTGCCTGAAGGAGGTTGGTTG
CCACGGAGCCATAATTGTGACCACACCGCAGGAGGTGGCCCTGGACGATG
TACGCAAGGAGATCACCTTCTGCAAGAAGACCGGCATCAATATCCTGGGC
ATCGTCGAGAATATGAGTGGGTTCGTGTGCCCCCATTGCACCTCGTGCAC
CAATATATTCTCGTCAAACGGTGGCGTCTCACTGGCCACTTACGCCCAAG
TACCACATCTAGGAACTCTGCCCATAGATCCCCGTGTTGGCATTTTGGCG
GGCACCACTACGTCCGTCTTGGATGAGCTTCCGGATTCCACGACAGCGGA
GGTGCTGACGCATATAGTTGAGAAGTTGAAAACGATGTTGGTCTCCTAAA
AGCTTTCTAGACCAT

BS15775.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-RA 783 CG4858-PA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-RA 950 CG4858-RA 79..862 17..800 3920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20526836..20527282 126..572 2235 100 Plus
3L 28110227 3L 20527592..20527822 570..800 1155 100 Plus
3L 28110227 3L 20526654..20526766 17..129 565 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:55:28 has no hits.

BS15775.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:23:59 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:24 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:44 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..859 17..797 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:24:00 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:53 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
CG4858-RA 79..859 17..797 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:53 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20526654..20526764 17..127 100 -> Plus
3L 20526838..20527280 128..570 100 -> Plus
3L 20527593..20527819 571..797 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:44 Download gff for BS15775.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20519754..20519864 17..127 100 -> Plus
arm_3L 20519938..20520380 128..570 100 -> Plus
arm_3L 20520693..20520919 571..797 100   Plus

BS15775.pep Sequence

Translation from 16 to 798

> BS15775.pep
MLDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSV
PYLLGLEGRDIFQCDDGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGP
KKTMMIRQFLTDVRWDELDYLIIDTPPGTSDEHITVMECLKEVGCHGAII
VTTPQEVALDDVRKEITFCKKTGINILGIVENMSGFVCPHCTSCTNIFSS
NGGVSLATYAQVPHLGTLPIDPRVGILAGTTTSVLDELPDSTTAEVLTHI
VEKLKTMLVS*

BS15775.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:17:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG4858-PA 260 CG4858-PA 1..260 1..260 1355 100 Plus
CG17904-PA 311 CG17904-PA 54..306 5..254 556 47.9 Plus
CG3262-PE 293 CG3262-PE 38..279 5..258 361 34.3 Plus
CG3262-PD 293 CG3262-PD 38..279 5..258 361 34.3 Plus
CG3262-PF 207 CG3262-PF 19..193 75..258 224 31 Plus