Clone BS15784 Report

Search the DGRC for BS15784

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:157
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG32207-RA
Protein status:BS15784.pep: validated full length
Sequenced Size:16

Clone Sequence Records

BS15784.3prime Sequence

285 bp (285 high quality bases) assembled on 2006-12-21

> BS15784.3prime
ATGGTCTAGAAAGCTTTTACTTTAGAAGCGGTGCAGATGGAACGGCGTAG
CTCAGTGGTGCGGAGTAGGCCAAAGGCGAGGGGTAGGCCATTAGTACAGC
CAGAGGAGAGTAAGCCACGTAAGCAGTGTAGGCCAAAGGCGCACCAATCA
GTCCAGGCTTGGCAGCAGAGCAGGAGACGATGGCCAAGACAAGGACGTCG
GATTTAAACATTTGGATTATGGATCTGGTGCTTTCGGTTCGAAAACTTGA
ACCTGATGTCGCCCAACACATGTCGACTGATAACT

BS15784.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG32207-PA 255 CG32207-RA 1..248 271..24 1240 100 Minus
CG12519-PA 396 CG12519-RA 323..386 90..27 270 96.8 Minus
CG32213-PA 465 CG32213-RA 374..437 108..45 195 92.1 Minus
CG32208-PA 465 825-Oak-RA 374..437 108..45 195 92.1 Minus
CG32214-PA 426 CG32214-RA 335..400 108..43 180 90.9 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 04:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG18294-RA 507 CG18294-RA 14..163 252..103 345 82 Minus
CG12519-RB 600 CG12519-RB 12..161 252..103 345 82 Minus
CG12519-RA 507 CG12519-RA 12..161 252..103 345 82 Minus
CG12519-RB 600 CG12519-RB 357..438 108..27 320 92.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 04:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477676..19477851 24..199 880 100 Plus
3L 28110227 3L 19423378..19423450 199..271 365 100 Plus
3L 28110227 3L 19477906..19477978 199..271 365 100 Plus
3L 28110227 3L 19487161..19487225 199..263 325 100 Plus
3L 28110227 3L 19472902..19472983 108..27 320 92.7 Minus
3L 28110227 3L 19486809..19486873 27..91 280 95.4 Plus
3L 28110227 3L 19423273..19423323 149..199 255 100 Plus
3L 28110227 3L 19467718..19467799 108..27 245 86.6 Minus
3L 28110227 3L 19471757..19471820 45..108 245 92.2 Plus
3L 28110227 3L 19476247..19476310 108..45 245 92.2 Minus
3L 28110227 3L 19422986..19423050 27..91 235 90.8 Plus
3L 28110227 3L 19467017..19467093 199..271 215 88.3 Plus
3L 28110227 3L 19472479..19472555 271..199 215 88.3 Minus
3L 28110227 3L 19475512..19475588 199..271 215 88.3 Plus
Blast to na_te.dros performed on 2015-01-30 04:24:06 has no hits.

BS15784.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:28 Download gff for BS15784.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..271 98   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:22 Download gff for BS15784.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..271 98   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-05 05:31:32 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-01-30 06:45:44 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 06:45:44 Download gff for BS15784.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 19477668..19477851 16..199 98 <- Plus
3L 19477907..19477980 200..274 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 05:31:32 Download gff for BS15784.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470768..19470951 16..199 98 <- Plus
arm_3L 19471007..19471080 200..274 98   Plus

BS15784.5prime Sequence

285 bp (285 high quality bases) assembled on 2006-12-21

> BS15784.5prime
GAAGTTATCAGTCGACATGTGTTGGGCGACATCAGGTTCAAGTTTTCGAA
CCGAAAGCACCAGATCCATAATCCAAATGTTTAAATCCGACGTCCTTGTC
TTGGCCATCGTCTCCTGCTCTGCTGCCAAGCCTGGACTGATTGGTGCGCC
TTTGGCCTACACTGCTTACGTGGCTTACTCTCCTCTGGCTGTACTAATGG
CCTACCCCTCGCCTTTGGCCTACTCCGCACCACTGAGCTACGCCGTTCCA
TCTGCACCGCTTCTTATCTAAAAGCTTTCTAGACC

BS15784.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG32207-PA 255 CG32207-RA 1..255 17..271 1275 100 Plus
CG12519-PA 396 CG12519-RA 323..396 198..271 295 95.9 Plus
CG32213-PA 465 CG32213-RA 374..437 180..243 195 92.1 Plus
CG32208-PA 465 825-Oak-RA 374..437 180..243 195 92.1 Plus
CG32214-PA 426 CG32214-RA 335..400 180..245 180 90.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-02 14:03:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG12519-RB 600 CG12519-RB 357..449 180..272 360 92.5 Plus
CG12519-RA 507 CG12519-RA 357..449 180..272 360 92.5 Plus
CG12519-RB 600 CG12519-RB 12..161 36..185 345 82 Plus
CG12519-RA 507 CG12519-RA 12..161 36..185 345 82 Plus
CG18294-RA 507 CG18294-RA 14..163 36..185 345 82 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-02 14:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477668..19477851 272..89 920 100 Minus
3L 28110227 3L 19423378..19423450 89..17 365 100 Minus
3L 28110227 3L 19477906..19477978 89..17 365 100 Minus
3L 28110227 3L 19472902..19472994 180..272 360 92.5 Plus
3L 28110227 3L 19487161..19487225 89..25 325 100 Minus
3L 28110227 3L 19486798..19486873 272..197 305 93.4 Minus
3L 28110227 3L 19467718..19467810 180..272 285 87.1 Plus
3L 28110227 3L 19471728..19471820 272..180 270 86 Minus
3L 28110227 3L 19476247..19476339 180..272 270 86 Plus
3L 28110227 3L 19422975..19423050 272..197 260 89.5 Minus
3L 28110227 3L 19423273..19423323 139..89 255 100 Minus
3L 28110227 3L 19467017..19467093 89..17 215 88.3 Minus
3L 28110227 3L 19472479..19472555 17..89 215 88.3 Plus
3L 28110227 3L 19475512..19475588 89..17 215 88.3 Minus
Blast to na_te.dros performed on 2015-02-02 14:03:47 has no hits.

BS15784.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:29 Download gff for BS15784.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..271 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:24 Download gff for BS15784.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32207-PA 1..255 17..271 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-08 14:13:55 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2015-02-02 14:51:05 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-02 14:51:05 Download gff for BS15784.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 19477662..19477851 89..281 97 <- Minus
3L 19477907..19477980 14..88 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-08 14:13:55 Download gff for BS15784.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470762..19470951 89..281 97 <- Minus
arm_3L 19471007..19471080 14..88 98   Minus

BS15784.complete Sequence

287 bp assembled on 2006-11-29

GenBank Submission: FJ637966

> BS15784.complete
GAAGTTATCAGTCGACATGTGTTGGGCGACATCAGGTTCAAGTTTTCGAA
CCGAAAGCACCAGATCCATAATCCAAATGTTTAAATCCGACGTCCTTGTC
TTGGCCATCGTCTCCTGCTCTGCTGCCAAGCCTGGACTGATTGGTGCGCC
TTTGGCCTACACTGCTTACGTGGCTTACTCTCCTCTGGCTGTACTAATGG
CCTACCCCTCGCCTTTGGCCTACTCCGCACCACTGAGCTACGCCGTTCCA
TCTGCACCGCTTCTTATCTAAAAGCTTTCTAGACCAT

BS15784.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG12519-RB 396 CG12519-PB 305..396 180..271 355 92.4 Plus
CG12519-RA 396 CG12519-PA 305..396 180..271 355 92.4 Plus
CG32214-RC 351 CG32214-PC 260..351 180..271 280 87 Plus
CG12519-RB 396 CG12519-PB 1..109 77..185 185 78 Plus
CG12519-RA 396 CG12519-PA 1..109 77..185 185 78 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12519-RB 600 CG12519-RB 357..449 180..272 360 92.5 Plus
CG12519-RA 507 CG12519-RA 357..449 180..272 360 92.5 Plus
CG12519-RB 600 CG12519-RB 12..161 36..185 345 82 Plus
CG12519-RA 507 CG12519-RA 12..161 36..185 345 82 Plus
CG18294-RA 507 CG18294-RA 14..163 36..185 345 82 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:33:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19477668..19477851 272..89 920 100 Minus
3L 28110227 3L 19423378..19423450 89..17 365 100 Minus
3L 28110227 3L 19477906..19477978 89..17 365 100 Minus
3L 28110227 3L 19472902..19472994 180..272 360 92.5 Plus
3L 28110227 3L 19487161..19487225 89..25 325 100 Minus
3L 28110227 3L 19486798..19486873 272..197 305 93.4 Minus
3L 28110227 3L 19467718..19467810 180..272 285 87.1 Plus
3L 28110227 3L 19471728..19471820 272..180 270 86 Minus
3L 28110227 3L 19476247..19476339 180..272 270 86 Plus
3L 28110227 3L 19422975..19423050 272..197 260 89.5 Minus
3L 28110227 3L 19423273..19423323 139..89 255 100 Minus
3L 28110227 3L 19467017..19467093 89..17 215 88.3 Minus
3L 28110227 3L 19472479..19472555 17..89 215 88.3 Plus
3L 28110227 3L 19475512..19475588 89..17 215 88.3 Minus
Blast to na_te.dros performed on 2014-11-26 22:33:37 has no hits.

BS15784.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:57:57 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 1..255 17..271 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:12:50 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 486..749 14..281 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:03 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
CG12519-RA 375..446 198..269 95   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:57:58 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
CG32207-RA 486..749 14..281 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:23 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
CG12519-RA 375..446 198..269 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:23 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19477671..19477851 89..269 100 <- Minus
3L 19477907..19477978 17..88 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:03 Download gff for BS15784.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19470771..19470951 89..269 100 <- Minus
arm_3L 19471007..19471078 17..88 100   Minus

BS15784.pep Sequence

Translation from 16 to 270

> BS15784.pep
MCWATSGSSFRTESTRSIIQMFKSDVLVLAIVSCSAAKPGLIGAPLAYTA
YVAYSPLAVLMAYPSPLAYSAPLSYAVPSAPLLI*

BS15784.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-PC 116 CG32214-PC 1..116 21..84 175 41.4 Plus
CG32214-PB 116 CG32214-PB 1..116 21..84 175 41.4 Plus
CG14096-PA 122 CG14096-PA 1..54 21..83 167 57.1 Plus
CG12519-PB 131 CG12519-PB 1..54 21..83 167 57.1 Plus
CG12519-PA 131 CG12519-PA 1..54 21..83 167 57.1 Plus