Clone Sequence Records
BS15786.3prime Sequence
770 bp (764 high quality bases) assembled on 2006-12-21
> BS15786.3prime
ATGGTCTAGAAAGCTTTCCCTTTATTCACCTGCTGCCTTGTTTCCACTTT
CGTTCTTTTGGCCCGGCTGCTGCTGCTGTTGCTGCGGCTGCTCCGGGCTA
CCATTCAAATTCTGAAGCAGACTGATCTTCAAGTACACGCTACCCAGGTG
GACGTCGCGTCGCCGAATGGCAATGCACTTGCACTGCTCCAACAGGGATG
CCCTGTAGAGCTCCCTGAGCTCCAGGCGGCCCATGCCGAGCATTTCGTTG
AGACAGGTGCCGGGTTCGCGCCACCAAACCGTGATGTCTACATGGCCAGC
ACTCTGTTCCGGATCCTGCAGGCTCTTATCTTCCATATCGACCTGACGCT
GAGCCGTCTGCCCGAAACGGGTGCACTGCGTCAGGCTCTGGAACTTCTCC
GACTCGAACTGCATGATGTGGAACATCGGTTGGCGCGGCACTTTACGGAT
CAAGTCCCCCGACAGCTGGCACTCCACGGTGAAAATGGGTCGCACTTCGT
TCTGAACCAGTTCCATGCGTTGGGTTCCCTCCGGCTGCAATGTCAGTGCC
TCCAAGTGCAGCTGCAAGGCGTTGCAGCTGCGGAAGAGCTCCGGCGTCAT
CACCAGCTCATCATCCTCCGATTCCTGGGCGGTTTGCTCCGGCTCGGCTC
CCGGCCACAGGACCTCCTGCTGTTTCCTAATCTTAAGAGGTTCGGCGGAG
GCAGCAGTGGCGAAAAGGGCCACCAGGTCCGCGTCCAATTTCTTCATGGC
CTCCATGTCGACTGATAACT
BS15786.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 741 | CG32425-RB | 1..734 | 756..23 | 3670 | 100 | Minus |
CG32425-PE | 2280 | CG32425-RE | 1..727 | 756..30 | 3635 | 100 | Minus |
CG32425-PA | 2280 | CG32425-RA | 1..727 | 756..30 | 3635 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 21:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1899 | 756..23 | 3670 | 100 | Minus |
CG32425-RB | 1090 | CG32425-RB | 85..818 | 756..23 | 3670 | 100 | Minus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 756..30 | 3635 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 21:02:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510786 | 756..23 | 3670 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 21:02:05 has no hits.
BS15786.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:33 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..756 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:27 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..756 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-21 16:39:48 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..818 | 23..763 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 23:30:25 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..818 | 23..763 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 23:30:25 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510048..20510786 | 23..763 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-21 16:39:48 Download gff for
BS15786.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503148..20503886 | 23..763 | 99 | | Minus |
BS15786.5prime Sequence
771 bp (731 high quality bases) assembled on 2006-12-21
> BS15786.5prime
GAAGTTATCAGTCGACATGGAGGCCATGAAGAAATTGGACGCGGACCTGG
TGGCCCTTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAAGATTAGGAAA
CAGCAGGAGGTCCTGTGGCCGGGAGCCGAGCCGGAGCAAACCGCCCAGGA
ATCGGAGGATGATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTGCA
ACGCCTTGCAGCTGCACTTGGAGGCACTGACATTGCAGCCGGAGGGAACC
CAACGCATGGAACTGGTTCAGAACGAAGTGCGACCCATTTTCACCGTGGA
GTGCCAGCTGTCGGGGGACTTGATCCGTAAAGTGCCGCGCCAACCGATGT
TCCACATCATGCAGTTCGAGTCGGAGAAGTTCCAGAGCCTGACGCAGTGC
ACCCGTTTCGGGCAGACGGCTCAGCGTCAGGTCGATATGGAAGATAAGAG
CCTGCAGGATCCGGAACAGAGTGCTGGCCATGTAGACATCACGGTTTGGT
GGCGCGAACCCGGCACCTGTCTCAACGAAATGCTCGGCATGGGCCGCCTG
GAGCTCAGGGAGCTCTACAGGGCATCCCTGTTGGAGCAGTGCAAGTGCAT
TGCCATTCGGCGACGCGACGTCCACCTGGGTAGCGTGTACTTGAAGATCA
GTCTGCTTCAGAATTTGAATGGTAGCCCGGAGCAGCCGCAGCAACAGCAG
CAGCAGCCGGGCCAAAAGAACGAAAGTGGAAACAAGGCAGCAGGTGAATA
TATATGAAAGCTTTCTAGACC
BS15786.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:27:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 741 | CG32425-RB | 1..741 | 17..757 | 3705 | 100 | Plus |
CG32425-PE | 2280 | CG32425-RE | 1..727 | 17..743 | 3635 | 100 | Plus |
CG32425-PA | 2280 | CG32425-RA | 1..727 | 17..743 | 3635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:45:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1906 | 17..757 | 3705 | 100 | Plus |
CG32425-RB | 1090 | CG32425-RB | 85..825 | 17..757 | 3705 | 100 | Plus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:45:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510793 | 17..757 | 3705 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:45:24 has no hits.
BS15786.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:34 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..757 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:29 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-PB | 1..741 | 17..757 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:53:02 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 10..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:10:02 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 80..827 | 10..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:10:02 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510048..20510795 | 10..762 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:53:02 Download gff for
BS15786.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503148..20503895 | 10..762 | 99 | | Plus |
BS15786.complete Sequence
773 bp assembled on 2006-11-29
GenBank Submission: FJ637967
> BS15786.complete
GAAGTTATCAGTCGACATGGAGGCCATGAAGAAATTGGACGCGGACCTGG
TGGCCCTTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAAGATTAGGAAA
CAGCAGGAGGTCCTGTGGCCGGGAGCCGAGCCGGAGCAAACCGCCCAGGA
ATCGGAGGATGATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTGCA
ACGCCTTGCAGCTGCACTTGGAGGCACTGACATTGCAGCCGGAGGGAACC
CAACGCATGGAACTGGTTCAGAACGAAGTGCGACCCATTTTCACCGTGGA
GTGCCAGCTGTCGGGGGACTTGATCCGTAAAGTGCCGCGCCAACCGATGT
TCCACATCATGCAGTTCGAGTCGGAGAAGTTCCAGAGCCTGACGCAGTGC
ACCCGTTTCGGGCAGACGGCTCAGCGTCAGGTCGATATGGAAGATAAGAG
CCTGCAGGATCCGGAACAGAGTGCTGGCCATGTAGACATCACGGTTTGGT
GGCGCGAACCCGGCACCTGTCTCAACGAAATGCTCGGCATGGGCCGCCTG
GAGCTCAGGGAGCTCTACAGGGCATCCCTGTTGGAGCAGTGCAAGTGCAT
TGCCATTCGGCGACGCGACGTCCACCTGGGTAGCGTGTACTTGAAGATCA
GTCTGCTTCAGAATTTGAATGGTAGCCCGGAGCAGCCGCAGCAACAGCAG
CAGCAGCCGGGCCAAAAGAACGAAAGTGGAAACAAGGCAGCAGGTGAATA
TATATGAAAGCTTTCTAGACCAT
BS15786.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 1593 | CG32425-PF | 853..1593 | 17..757 | 3705 | 100 | Plus |
CG32425-RB | 741 | CG32425-PB | 1..741 | 17..757 | 3705 | 100 | Plus |
CG32425-RA | 2280 | CG32425-PA | 1..727 | 17..743 | 3635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-RF | 2171 | CG32425-RF | 1166..1906 | 17..757 | 3705 | 100 | Plus |
CG32425-RB | 1090 | CG32425-RB | 85..825 | 17..757 | 3705 | 100 | Plus |
CG32425-RA | 2813 | CG32425-RA | 113..839 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:07:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20510053..20510793 | 17..757 | 3705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:07:23 has no hits.
BS15786.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 23:23:30 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:55:07 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RF | 1079..1826 | 10..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:47:32 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 85..824 | 17..756 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:23:30 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RF | 1079..1826 | 10..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:55 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32425-RB | 85..824 | 17..756 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:55 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20510053..20510792 | 17..756 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:47:32 Download gff for
BS15786.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20503153..20503892 | 17..756 | 100 | | Plus |
BS15786.pep Sequence
Translation from 16 to 756
> BS15786.pep
MEAMKKLDADLVALFATAASAEPLKIRKQQEVLWPGAEPEQTAQESEDDE
LVMTPELFRSCNALQLHLEALTLQPEGTQRMELVQNEVRPIFTVECQLSG
DLIRKVPRQPMFHIMQFESEKFQSLTQCTRFGQTAQRQVDMEDKSLQDPE
QSAGHVDITVWWREPGTCLNEMLGMGRLELRELYRASLLEQCKCIAIRRR
DVHLGSVYLKISLLQNLNGSPEQPQQQQQQPGQKNESGNKAAGEYI*
BS15786.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32425-PB | 246 | CG32425-PB | 1..246 | 1..246 | 1273 | 100 | Plus |
CG32425-PF | 530 | CG32425-PF | 285..530 | 1..246 | 1273 | 100 | Plus |
CG32425-PA | 759 | CG32425-PA | 1..242 | 1..242 | 1251 | 100 | Plus |
CG32425-PE | 759 | CG32425-PE | 1..242 | 1..242 | 1251 | 100 | Plus |