Clone Sequence Records
BS15791.complete Sequence
1061 bp assembled on 2010-02-09
GenBank Submission: KX802267
> BS15791.complete
GAAGTTATCAGTCGACATGCGTCTGTTTATAGTGCTGAGTGTTTGTGTGG
CGTTAGCTTCCGCCGGAGGTTACGGCGGTGGAGGCGGAGGTGGTGGTGGT
GGACACGCCGGAGCATCCGCTTCCTCGTCCGCTTCTGCCGGTGCGATTGG
CGGCGGTGATGGAGGCGGTAAGCTCGGCGGAGGTTATGGATCTGGTGGTC
ACGGTTCTGGAGGACTTGGATCTGGCGGTTTCGGCTCTGGCGGTGATTTA
GGACTTGGAGGCGGCGGTGTCGGAGGAGGTCCCTTCGCAGGTGGCCATGC
TGGCGGTGGAGTGATCTCCGGCGGAGGTCATTCTGGAGGTGGAGGCGGAT
TCGGTGGCGGTCCCGGATTCGGATCAGGTGGTCATTCCGGTGGAGGAATC
GGTGACGGCCCTGGATTTGGATCAGGTGGATATTCCGGAGGAGGTGGCGG
AATCGGCGGTGGAGGTGGCCATTCTGGTGGAGGTAGCGGAATCGGTGGCG
GCCCTGGATTTGGTGGCGGAATCGGCGGCGGAGGTGGCCATTCTGGTGGA
GGCGGTGGAATCGGCGGCGGTCCTGGATTTGGTGGAGGAATCGGCGGATC
CGGTAGCTCTGCATCATCTTCAGTTGGAGTTATTGGTGGAGGTCATGGCG
GCGGAGGTCACGGCGGAGGAGGCTTCGGACCTGGTGGAGGAGGTGGAGGA
GGCTTCGGACCAGGTGGAGGAGGCTTTGGACCCGGCATTGGAGGTGGCGG
TGGAGGCTTTGGCCCCGGCATTGGAGGCGGATCCGGTGGTGGACACTTTG
GTGGTGGTCTTAGCCACAAGCACAAAGGCCATGGAGGCGGAGGCGGCTTC
AAAGGCGGATACGGCGGCGGCGGCGGCGGAGGCGGAGGCGGCGGTGGCGG
CTACGGAATTGGACCTGCAGTCTCCTTAGGTGGCGGACCAGGCGGTGGTG
GTAGCTACGGAGGTGGGTACGGAGGTGGCTCCGGAGCCTCTGCTTCAGCC
AGTGCCAGTGCCTCAGCAGGAGCAGGCGGCGGCTATCATGGCTAGAAGCT
TTCTAGACCAT
BS15791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:05:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-RA | 1029 | CG17108-PA | 1..1029 | 17..1045 | 5130 | 99.9 | Plus |
| CG17108-RA | 1029 | CG17108-PA | 427..512 | 512..597 | 325 | 91.9 | Plus |
| CG17108-RA | 1029 | CG17108-PA | 496..581 | 443..528 | 325 | 91.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-RA | 1164 | CG17108-RA | 44..1072 | 17..1045 | 5130 | 99.9 | Plus |
| CG17108-RA | 1164 | CG17108-RA | 470..555 | 512..597 | 325 | 91.9 | Plus |
| CG17108-RA | 1164 | CG17108-RA | 539..624 | 443..528 | 325 | 91.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10693032..10694060 | 1045..17 | 5130 | 99.9 | Minus |
| 2L | 23513712 | 2L | 10693480..10693565 | 528..443 | 325 | 91.9 | Minus |
| 2L | 23513712 | 2L | 10693549..10693634 | 597..512 | 325 | 91.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:05:37 has no hits.
BS15791.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-09 18:11:04 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 44..1072 | 17..1045 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:44:44 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 44..1072 | 17..1045 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:14:44 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 44..1072 | 17..1045 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:19 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 44..1072 | 17..1045 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:19 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10693032..10694060 | 17..1045 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:44:44 Download gff for
BS15791.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10693032..10694060 | 17..1045 | 99 | | Minus |
BS15791.3prime Sequence
741 bp (739 high quality bases) assembled on 2006-12-21
> BS15791.3prime
ATGGTCTAGAAAGCTTCTACCTATGATAGCCGCCGCCTGCTCCTGCTGAG
GCACTGGCACTGGCTGAAGCAGAGGCTCCGGAGCCACCTCCGTACCCACC
TCCGTAGCTACCACCACCGCCTGGTCCGCCACCTAAGGAGACTGCAGGTC
CAATTCCGTAGCCGCCACCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCCG
TATCCGCCTTTGAAGCCGCCTCCGCCTCCATGGCCTTTGTGCTTGTGGCT
AAGACCACCACCAAAGTGTCCACCACCGGATCCGCCTCCAATGCCGGGGC
CAAAGCCTCCACCGCCACCTCCAATGCCGGGTCCAAAGCCTCCTCCACCT
GGTCCGAAGCCTCCTCCACCTCCTCCACCAGGTCCGAAGCCTCCTCCGCC
GTGACCTCCGCCGCCATGACCTCCACCAATAACTCCAACTGAAGATGATG
CAGAGCTACCGGATCCGCCGATTCCTCCACCAAATCCAGGACCGCCGCCG
ATTCCACCGCCTCCACCAGAATGGCCACCTCCGCCGCCGATTCCGCCACC
AAATCCAGGGCCGCCACCGATTCCGCTACCTCCACCAGAATGGCCACCTC
CACCGCCGATTCCGCCACCTCCTCCGGAATATCCACCTGATCCAAATCCA
GGGCCGTCACCGATTCCTCCACCGGAATGACCACCTGATCCGAATCCGGG
ACCGCCACCGAATCCGCCTCCACCTCCAGAATGACCTCCGC
BS15791.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-PA | 1029 | CG17108-RA | 305..1023 | 741..23 | 3570 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 15:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-RA | 1164 | CG17108-RA | 348..1066 | 741..23 | 3580 | 99.9 | Minus |
| CG17108-RA | 1164 | CG17108-RA | 470..555 | 550..465 | 325 | 91.9 | Minus |
| CG17108-RA | 1164 | CG17108-RA | 539..624 | 619..534 | 325 | 91.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 15:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10693038..10693756 | 23..741 | 3580 | 99.9 | Plus |
| 2L | 23513712 | 2L | 10693480..10693565 | 534..619 | 325 | 91.9 | Plus |
| 2L | 23513712 | 2L | 10693549..10693634 | 465..550 | 325 | 91.9 | Plus |
Blast to na_te.dros performed on 2015-02-11 15:48:17 has no hits.
BS15791.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:43 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-PA | 305..1029 | 17..741 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:42 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-PA | 305..1029 | 17..741 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-26 03:48:25 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 348..1075 | 12..741 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:30:48 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 348..1075 | 12..741 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:30:48 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10693029..10693756 | 12..741 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-26 03:48:25 Download gff for
BS15791.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10693029..10693756 | 12..741 | 99 | | Plus |
BS15791.5prime Sequence
732 bp (679 high quality bases) assembled on 2006-12-21
> BS15791.5prime
GAAGTTATCAGTCGACATGCGTCTGTTTATAGTGCTGAGTGTTTGTGTGG
CGTTAGCTTCCGCCGGAGGTTACGGCGGTGGAGGCGGAGGTGGTGGTGGT
GGACACGCCGGAGCATCCGCTTCCTCGTCCGCTTCTGCCGGTGCGATTGG
CGGCGGTGATGGAGGCGGTAAGCTCGGCGGAGGTTATGGATCTGGTGGTC
ACGGTTCTGGAGGACTTGGATCTGGCGGTTTCGGCTCTGGCGGTGATTTA
GGACTTGGAGGCGGCGGTGTCGGAGGAGGTCCCTTCGCAGGTGGCCATGC
TGGCGGTGGAGTGATCTCCGGCGGAGGTCATTCTGGAGGTGGAGGCGGAT
TCGGTGGCGGTCCCGGATTCGGATCAGGTGGTCATTCCGGTGGAGGAATC
GGTGACGGCCCTGGATTTGGATCAGGTGGATATTCCGGAGGAGGTGGCGG
AATCGGCGGTGGAGGTGGCCATTCTGGTGGAGGTAGCGGAATCGGTGGCG
GCCCTGGATTTGGTGGCGGAATCGGCGGCGGAGGTGGCCATTCTGGTGGA
GGCGGTGGAATCGGCGGCGGTCCTGGATTTGGTGGAGGAATCGGCGGATC
CGGTAGCTCTGCATCATCTTCAGTTGGAGTTATTGGTGGAGGTCATGGCG
GCGGAGGTCACGGCGGAGGAGGCTTCGGACCTGGTGGAGGAGGTGGAGGA
GGCTTCGGACCAGGTGGAGGAGGCTTTGGACC
BS15791.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-PA | 1029 | CG17108-RA | 1..716 | 17..732 | 3580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-08 07:24:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-RA | 1164 | CG17108-RA | 44..759 | 17..732 | 3580 | 100 | Plus |
| CG17108-RA | 1164 | CG17108-RA | 470..555 | 512..597 | 325 | 91.9 | Plus |
| CG17108-RA | 1164 | CG17108-RA | 539..624 | 443..528 | 325 | 91.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-08 07:24:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10693345..10694060 | 732..17 | 3580 | 100 | Minus |
| 2L | 23513712 | 2L | 10693480..10693565 | 528..443 | 325 | 91.9 | Minus |
| 2L | 23513712 | 2L | 10693549..10693634 | 597..512 | 325 | 91.9 | Minus |
Blast to na_te.dros performed on 2015-02-08 07:24:44 has no hits.
BS15791.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:44 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-PA | 1..716 | 17..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:44 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-PA | 1..716 | 17..732 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-11 22:24:03 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 42..759 | 13..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-08 08:22:04 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17108-RA | 42..759 | 13..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-08 08:22:04 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10693345..10694062 | 13..732 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-11 22:24:03 Download gff for
BS15791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10693345..10694062 | 13..732 | 99 | | Minus |
BS15791.pep Sequence
Translation from 16 to 1044
> BS15791.pep
MRLFIVLSVCVALASAGGYGGGGGGGGGGHAGASASSSASAGAIGGGDGG
GKLGGGYGSGGHGSGGLGSGGFGSGGDLGLGGGGVGGGPFAGGHAGGGVI
SGGGHSGGGGGFGGGPGFGSGGHSGGGIGDGPGFGSGGYSGGGGGIGGGG
GHSGGGSGIGGGPGFGGGIGGGGGHSGGGGGIGGGPGFGGGIGGSGSSAS
SSVGVIGGGHGGGGHGGGGFGPGGGGGGGFGPGGGGFGPGIGGGGGGFGP
GIGGGSGGGHFGGGLSHKHKGHGGGGGFKGGYGGGGGGGGGGGGGYGIGP
AVSLGGGPGGGGSYGGGYGGGSGASASASASASAGAGGGYHG*
BS15791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:17:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17108-PA | 342 | CG17108-PA | 1..342 | 1..342 | 1924 | 100 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 230..545 | 11..328 | 710 | 50.4 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 230..534 | 11..328 | 704 | 52.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 243..582 | 17..338 | 702 | 51.7 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 243..571 | 17..338 | 688 | 50.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 272..600 | 15..339 | 663 | 49.9 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 220..515 | 33..339 | 661 | 51.9 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 220..525 | 33..342 | 657 | 50.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 268..589 | 15..339 | 641 | 48.1 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 233..493 | 80..342 | 608 | 52.3 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 32..408 | 14..342 | 516 | 40.2 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 347..591 | 15..263 | 486 | 48.5 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 32..378 | 14..342 | 475 | 40 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 30..378 | 33..342 | 461 | 40.8 | Plus |
| resilin-PB | 575 | CG15920-PB | 66..466 | 16..339 | 442 | 36.7 | Plus |
| CG15140-PB | 335 | CG15140-PB | 87..323 | 66..322 | 407 | 42.1 | Plus |
| resilin-PB | 575 | CG15920-PB | 122..485 | 14..342 | 402 | 36.2 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 394..609 | 12..253 | 399 | 45 | Plus |
| resilin-PB | 575 | CG15920-PB | 30..401 | 38..342 | 392 | 33.8 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 28..332 | 89..342 | 388 | 38.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 28..332 | 89..342 | 388 | 38.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 412..598 | 15..225 | 361 | 43.9 | Plus |
| resilin-PB | 575 | CG15920-PB | 250..566 | 14..323 | 361 | 35.2 | Plus |
| resilin-PB | 575 | CG15920-PB | 380..572 | 16..233 | 261 | 36.9 | Plus |
| resilin-PB | 575 | CG15920-PB | 384..572 | 15..179 | 216 | 38.1 | Plus |
| Cpr47Ef-PC | 612 | CG13214-PC | 27..112 | 250..339 | 210 | 51.6 | Plus |
| Cpr47Ef-PD | 601 | CG13214-PD | 27..112 | 250..339 | 210 | 51.6 | Plus |
