Clone Sequence Records
BS15796.complete Sequence
1148 bp assembled on 2009-12-07
GenBank Submission: KX801438
> BS15796.complete
GAAGTTATCAGTCGACATGGCATTTACCAGCAGCTCATCGCCCGCTTGGG
ATTATCGAAGCTCCCCGGAAGCGTTGGGTGTCGTCCCGTTCCTGTGGCAG
CACCAGAACGCCACGGAAACGCCAACGGAAATAACCCTCCAGGCGACCAG
TTTCGGTGCCGGCCATCTGCTGTGGCTAGCCATCAATGCCTTCTTGTTTG
TCCTTATCCTGGGCGGCAATATTCTGACCATTGTGGCGGTGCGCACCTGC
CGCCACCTGCGATCGGTCATCTCCAATCTGTTCATCCTGTCGCTGGCCGT
CTCCGACTTCTGTGTGGGACTGGCACTGCCCTATCATCTGGTATTTTACA
TGGGCTCGGACATTGGCGCCATGAGAGGTCCCTGCCTGCTGCGCTTCTTC
CTGCTCATCTGCGCCTGCTGCGTGTCCATGTTGACTCTGATCTCGATTGC
GGTGGATCGGTATATAGCAGTCGTCTATGCTCTGCACTATAGAAGATACA
TGACCCGTCGAGTGGCATATAGCATCATCATATTCAATTGGTGCTTGGGT
GCATTGGTGGCTCTGCTGCCAGTGTTCTGGAATCGATGGCCGGATGCACA
GGCGTGCGAATTCGACGAAGTTCTCGCGCCTGGTTACATTGCCGGAGTGA
TAACGCCGGGTTTTGTGATCATCTGGATCTGTATGTTCCTCGTCTACTGG
CGCATCATGCGCGAGGCATCCAAGCAGGCGCTGCGATTGCGACAGTCGGT
GGTCTACAACACGGACGAGGCCACCACCATGCGAAATCTGCTGCTCCATC
CAGACTGGAAGAGCGTCCAGATTGTGGTCTTCATCATGGGCTGCTTCACG
CTCTGTTGGCTACCGTACTTCTGTGTGGCCATTGCCCAGCTATTTAGCAT
CTGCCAGAGCAGCTCGATGATCTACAAGACGACGTTCTCTCTGGCCATTG
CCAACTCTGCTCTCAATCCGATTATCTACTCGTGGAAGAACTCTGGCTTT
CGGCGAGCCTTTGTCCAAACATTATGCTGCCGAACGGCGAGGCAGTGCGA
GGATCAATTGCCGGCGGACAGCAAGCACCGCATGGAGGCCACATCCTCAT
CTCAGGAGATCAAACCGAAGGCCACTCAGTGAAAGCTTTCTAGACCAT
BS15796.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:52:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-RA | 1116 | CG12796-PA | 1..1116 | 17..1132 | 5580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-RA | 1218 | CG12796-RA | 23..1139 | 16..1132 | 5585 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:52:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6831476..6832114 | 1132..494 | 3195 | 100 | Minus |
X | 23542271 | X | 6832183..6832662 | 495..16 | 2400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:52:52 has no hits.
BS15796.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-08 09:42:39 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 1..1115 | 17..1131 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:00:22 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 24..1138 | 17..1131 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-23 18:24:46 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 1..1115 | 17..1131 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:02 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 24..1138 | 17..1131 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:02 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6831477..6832112 | 496..1131 | 100 | <- | Minus |
X | 6832183..6832661 | 17..495 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:00:22 Download gff for
BS15796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6725510..6726145 | 496..1131 | 100 | <- | Minus |
arm_X | 6726216..6726694 | 17..495 | 100 | | Minus |
BS15796.3prime Sequence
828 bp (807 high quality bases) assembled on 2006-12-21
> BS15796.3prime
ATGGTCTAGAAAGCTTTCCCCTATTGGCCTTCGGTTTGATCTCCTGAGAT
GAGGATGTGGCCTCCATGCGGTGCTTGCTGTCCGCCGGCAATTGCTCCTC
GCACTGCCTCGCCGTTCGGCAGCATAATGTTTGGACAAAGGCTCGCCGAA
AGCCAGAGTTCTTCCACGAGTAGATAATCGGATTGAGAGCAGAGTTGGCA
ATGGCCAGAGAGAACGTCGTCTTGTAGATCATCGAGCTGCTCTGGCAGAT
GCTAAATAGCTGGGCAATGGCCACACAGAAGTACGGTAGCCAACAGAGCG
TGAAGCAGCCCATGATGAAGACCACAATCTGGACGCTCTTCCAGTCTGGA
TGGAGCAGCAGATTTCGCATGGTGGTGGCCTCGTCCGTGTTGTAGACCAC
CGACTGTCGCAATCGCAGCGCCTGCTTGGATGCCTCGCGCATGATGCGCC
AGTAGACGAGGAACATACAGATCCAGATGATCACAAAACCCGGCGTTATC
ACTCCGGCAATGTAACCAGGCGCGAGAACTTCGTCGAATTCGCACGCCTG
TGCATCCGGCCATCGATTCCAGAACACTGGCAGCAGAGCCACCAATGCAC
CCAAGCACCAATTGAATATGATGATGCTATATGCCACTCGACGGGTCATG
TATCTTCTATAGTGCAGAGCATAGACGACTGCTATATACCGATCCACCGC
AATCGAGATCAGAGTCAACATGGACACGCAGCAGGCGCAGATGAGCAGGA
AGAAGCGCAGCAGGCAGGGACCTCTCATGGCGCCAATGTCCGAGCCCATG
TAAAATACCAGATGATAGGGCAGTGCCA
BS15796.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:28:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-PA | 1116 | CG12796-RA | 305..1108 | 828..25 | 3995 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-30 16:52:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-RA | 1218 | CG12796-RA | 328..1131 | 828..25 | 4005 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-30 16:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6831484..6832114 | 25..655 | 3140 | 99.8 | Plus |
X | 23542271 | X | 6832183..6832357 | 654..828 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2015-01-30 16:52:05 has no hits.
BS15796.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:53 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-PA | 306..1116 | 17..827 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:56 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-PA | 306..1116 | 17..827 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 15:54:12 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 329..1131 | 25..827 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-30 19:11:08 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 329..1131 | 25..827 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-30 19:11:08 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6831484..6832112 | 25..653 | 99 | <- | Plus |
X | 6832183..6832356 | 654..827 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 15:54:12 Download gff for
BS15796.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6725517..6726145 | 25..653 | 99 | <- | Plus |
arm_X | 6726216..6726389 | 654..827 | 100 | | Plus |
BS15796.5prime Sequence
871 bp (724 high quality bases) assembled on 2006-12-21
> BS15796.5prime
GAAGTTATCAGTCGACATGGCATTTACCAGCAGCTCATCGCCCGCTTGGG
ATTATCGAAGCTCCCCGGAAGCGTTGGGTGTCGTCCCGTTCCTGTGGCAG
CACCAGAACGCCACGGAAACGCCAACGGAAATAACCCTCCAGGCGACCAG
TTTCGGTGCCGGCCATCTGCTGTGGCTAGCCATCAATGCCTTCTTGTTTG
TCCTTATCCTGGGCGGCAATATTCTGACCATTGTGGCGGTGCGCACCTGC
CGCCACCTGCGATCGGTCATCTCCAATCTGTTCATCCTGTCGCTGGCCGT
CTCCGACTTCTGTGTGGGACTGGCACTGCCCTATCATCTGGTATTTTACA
TGGGCTCGGACATTGGCGCCATGAGAGGTCCCTGCCTGCTGCGCTTCTTC
CTGCTCATCTGCGCCTGCTGCGTGTCCATGTTGACTCTGATCTCGATTGC
GGTGGATCGGTATATAGCAGTCGTCTATGCTCTGCACTATAGAAGATACA
TGACCCGTCGAGTGGCATATAGCATCATCATATTCAATTGGTGCTTGGGT
GCATTGGTGGCTCTGCTGCCAGTGTTCTGGAATCGATGGCCGGATGCACA
GGCGTGCGAATTCGACGAAGTTCTCGCGCCTGGTTACATTGCCGGAGTGA
TAACGCCGGGTTTTGTGATCATCTGGATCTGTATGTTCCTCGTCTACTGG
CGCATCATGCGCGAGGCATCCAAGCAGGCGCTGCGATTGCGACAGTCGGT
GGTCTACAACACGGACGAGGCCACCACCATGCGAAATCTGCTGCTCCTCC
AGACTGGAAGAGCGTCCAGATTGTGGTCTTCATCATGGGCTGCTTCACGC
TCTGTTGGCTACCGTACTTCT
BS15796.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 19:28:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-PA | 1116 | CG12796-RA | 1..781 | 17..797 | 3905 | 100 | Plus |
CG12796-PA | 1116 | CG12796-RA | 783..856 | 798..871 | 370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-RA | 1218 | CG12796-RA | 23..879 | 16..871 | 4260 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 11:55:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6832183..6832662 | 495..16 | 2400 | 100 | Minus |
X | 23542271 | X | 6831736..6832114 | 871..494 | 1845 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-12 11:55:09 has no hits.
BS15796.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 11:37:54 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-PA | 1..856 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 13:17:57 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-PA | 1..856 | 17..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 23:21:43 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 14..879 | 7..871 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:57:42 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12796-RA | 14..879 | 7..871 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:57:42 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6831736..6832112 | 496..871 | 99 | <- | Minus |
X | 6832183..6832671 | 7..495 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 23:21:43 Download gff for
BS15796.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6725769..6726145 | 496..871 | 99 | <- | Minus |
arm_X | 6726216..6726704 | 7..495 | 99 | | Minus |
BS15796.pep Sequence
Translation from 16 to 1131
> BS15796.pep
MAFTSSSSPAWDYRSSPEALGVVPFLWQHQNATETPTEITLQATSFGAGH
LLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCV
GLALPYHLVFYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYI
AVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRWPDAQACEFD
EVLAPGYIAGVITPGFVIIWICMFLVYWRIMREASKQALRLRQSVVYNTD
EATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSS
MIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQCEDQLPA
DSKHRMEATSSSQEIKPKATQ*
BS15796.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12796-PA | 371 | CG12796-PA | 1..371 | 1..371 | 1957 | 100 | Plus |
Octbeta1R-PB | 421 | CG6919-PB | 100..419 | 47..336 | 272 | 29.2 | Plus |
Octbeta1R-PC | 428 | CG6919-PC | 100..419 | 47..336 | 272 | 29.2 | Plus |
Octbeta1R-PE | 508 | CG6919-PE | 100..419 | 47..336 | 272 | 29.2 | Plus |
Octbeta1R-PA | 508 | CG6919-PA | 100..419 | 47..336 | 272 | 29.2 | Plus |