Clone Sequence Records
BS15805.3prime Sequence
869 bp (814 high quality bases) assembled on 2007-04-16
> BS15805.3prime
ATGGTCTAGAAAGCTTTTATTTATTTTCATCCGAATGGTTCCAAAGAAAA
CTATAATCTGGGCCAGAATCAGAAACAGACTCAAGGCCCGAACTTGCACT
GTTATAGTCTATCAGTTCCACACCGAGCGCTAAAAACCGGTCCAATGTCG
CTTTCTCATATTTGATCATATTGTCAGGAACAAATATTTTTTTAAGGTTT
TTCAGTTTCAAAAACGATTCACAGTTACCCGACCGAAGAATGTCCACCTT
CTCTGTAAATATACTTAGGGTTCCCTTAGCATTAAAAATAATTTTTGTGT
CTAAATTTGAGATAGTGCATTGTTTTTCTAGCAAAGCTGCATAATCATCG
GTAATTATTGAAGCCTTATTGAGTGTGCTTAATCGTTTAAGATTTGGGTG
TTGTACAAAATGGCTAACGCTTTTAGGATCATAAAATCCGCACTCCAACC
CTCGTAGTTCATTTAATTTCGAAATAAGCTGTACCATTTCATCATCAATG
TTAAAACCTAAACGCAATTCCCTTAGTGTAGATTTTTCCTTTTCGTGTAA
AGCTTTAAGGAGCTGAAAGATTGGAATGGACCGCGTATAAGTTGAGACTG
CTCCAATTTCCTCGAAGTACATGCCCATATCTTCTTCTTCTTCGTGCGAT
TCAATGTCGATTTCCATATCATTTTCATTATTTTCAGGCAGCAGAATTAT
CAATTTTTGTAGCCTATTTAAACGCGATAGTCTGACGTAATCATTATCCC
ATGCATTATCATCCAGTATAAATTTTAAATTCTTTAAATTGGAGCAGTGG
GGAACGATTTGAGCTAGCTTTCCATGGTCGGAAAAGTGACTTTGATTCAC
TTCCAGGTACTCAATTTAG
BS15805.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-PA | 1428 | CG32115-RA | 575..1428 | 869..17 | 4230 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 17:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1560 | CG32115-RA | 694..1548 | 869..16 | 4250 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 17:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12912039..12912893 | 16..869 | 4225 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 17:10:42 has no hits.
BS15805.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:10 Download gff for
BS15805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-PA | 575..1428 | 17..869 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 17:11:09 Download gff for
BS15805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 694..1550 | 11..869 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 19:06:08 Download gff for
BS15805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 694..1550 | 11..869 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 19:06:08 Download gff for
BS15805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12912037..12912893 | 11..869 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 17:11:09 Download gff for
BS15805.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12905137..12905993 | 11..869 | 99 | | Plus |
BS15805.5prime Sequence
822 bp (773 high quality bases) assembled on 2007-04-17
> BS15805.5prime
GAAGTTATCAGTCGACATGAAAACCCAAATAACAGACATTAATCATTTTG
CTTTCTTTCGCATACTCGACATTCTGAAGAAAAACTGTGAAACACAGCAT
GGCGATGAAACTGAGGAGATCATAAAATACGCTGATATCCTTAATTTCGC
TACCGCAAGCTTTAAATTTACACGAATCGTTAGGGACTGGGATATACATT
TCTACACACGTTTGGCGATACATGAGTTGCATGTAGTTCCGCGGAGAAAT
ATAACCATAAACCTTGACGCGATGTATAAAACTCTAAATGCAGAAACAGA
GGAAGGAAGAAAGCATTTGGTGAACATCATAACTAGTATCGTATCAAATC
CCAGTATTCGAAGACTTAAACTGAATAATCTCGATGCATTCTTTTACGAG
GAGCACTCGAGTTTCGCTGATGAAATTTTAAAGATATTGCAATTGAAACG
TAACAGCAAACCAATTGAGTTAATTCTTAATATACCAGGTCGTGAAATAC
GTAACCTTCATGGCTTTCGAAATATCTCCAAGCTCATCCTAACGGCATCT
ATTGAAATTTCTGACCTTGAGAAATTTTGCCTTTATAACCCTAAATTGAG
TACCTTGGAAGTGAATCAAAGTCACTTTTCCGACCATGGAAAGCTAGCTC
AAATCGTTCCCCACTGCTCCAATTTAAAGAATTTAAAATTTATACTGGAT
GATAATGCATGGGATAATGATTACGTCAGACTATCGCGTTTAAATAGGCT
ACAAAAATTGATAATTCTGCTGCCTGNAAATAATGAAAATGATATGGAAA
TCGACATTGAATCGCACGAAGA
BS15805.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-PA | 1428 | CG32115-RA | 1..806 | 17..822 | 4011 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1560 | CG32115-RA | 120..925 | 17..822 | 4019 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:48:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12913054..12913527 | 490..17 | 2370 | 100 | Minus |
| 3L | 28110227 | 3L | 12912662..12912998 | 822..486 | 1674 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-13 07:48:18 has no hits.
BS15805.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 13:59:10 Download gff for
BS15805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-PA | 1..805 | 17..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 21:48:05 Download gff for
BS15805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..924 | 9..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:37:10 Download gff for
BS15805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..924 | 9..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:37:10 Download gff for
BS15805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12912663..12912995 | 489..821 | 99 | <- | Minus |
| 3L | 12913056..12913533 | 9..488 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 21:48:05 Download gff for
BS15805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12905763..12906095 | 489..821 | 99 | <- | Minus |
| arm_3L | 12906156..12906633 | 9..488 | 99 | | Minus |
BS15805.complete Sequence
1460 bp assembled on 2007-05-07
GenBank Submission: FJ637970
> BS15805.complete
GAAGTTATCAGTCGACATGAAAACCCAAATAACAGACATTAATCATTTTG
CTTTCTTTCGCATACTCGACATTCTGAAGAAAAACTGTGAAACACAGCAT
GGCGATGAAACTGAGGAGATCATAAAATACGCTGATATCCTTAATTTCGC
TACCGCAAGCTTTAAATTTACACGAATCGTTAGGGACTGGGATATACATT
TCTACACACGTTTGGCGATACATGAGTTGCATGTAGTTCCGCGGAGAAAT
ATAACCATAAACCTTGACGCGATGTATAAAACTCTAAATGCAGAAACAGA
GGAAGGAAGAAAGCATTTGGTGAACATCATAACTAGTATCGTATCAAATC
CCAGTATTCGAAGACTTAAACTGAATAATCTCGATGCATTCTTTTACGAG
GAGCACTCGAGTTTCGCTGATGAAATTTTAAAGATATTGCAATTGAAACG
TAACAGCAAACCAATTGAGTTAATTCTTAATATACCAGGTCGTGAAATAC
GTAACCTTCATGGCTTTCGAAATATCTCCAAGCTCATCCTAACGGCATCT
ATTGAAATTTCTGACCTTGAGAAATTTTGCCTTTATAACCCTAAATTGAG
TACCTTGGAAGTGAATCAAAGTCACTTTTCCGACCATGGAAAGCTAGCTC
AAATCGTTCCCCACTGCTCCAATTTAAAGAATTTAAAATTTATACTGGAT
GATAATGCATGGGATAATGATTACGTCAGACTATCGCGTTTAAATAGGCT
ACAAAAATTGATAATTCTGCTGCCTGAAAATAATGAAAATGATATGGAAA
TCGACATTGAATCGCACGAAGAAGAAGAAGATATGGGCATGTACTTCGAG
GAAATTGGAGCAGTCTCAACTTATACGCGGTCCATTCCAATCTTTCAGCT
CCTTAAAGCTTTACACGAAAAGGAAAAATCTACACTAAGGGAATTGCGTT
TAGGTTTTAACATTGATGATGAAATGGTACAGCTTATTTCGAAATTAAAT
GAACTACGAGGGTTGGAGTGCGGATTTTATGATCCTAAAAGCGTTAGCCA
TTTTGTACAACACCCAAATCTTAAACGATTAAGCACACTCAATAAGGCTT
CAATAATTACCGATGATTATGCAGCTTTGCTAGAAAAACAATGCACTATC
TCAAATTTAGACACAAAAATTATTTTTAATGCTAAGGGAACCCTAAGTAT
ATTTACAGAGAAGGTGGACATTCTTCGGTCGGGTAACTGTGAATCGTTTT
TGAAACTGAAAAACCTTAAAAAAATATTTGTTCCTGACAATATGATCAAA
TATGAGAAAGCGACATTGGACCGGTTTTTAGCGCTCGGTGTGGAACTGAT
AGACTATAACAGTGCAAGTTCGGGCCTTGAGTCTGTTTCTGATTCTGGCC
CAGATTATAGTTTTCTTTGGAACCATTCGGATGAAAATAAATAAAAGCTT
TCTAGACCAT
BS15805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1428 | CG32115-PA | 1..1428 | 17..1444 | 7140 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-RA | 1560 | CG32115-RA | 120..1548 | 17..1445 | 7145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12912039..12912998 | 1445..486 | 4800 | 100 | Minus |
| 3L | 28110227 | 3L | 12913054..12913527 | 490..17 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:49:26 has no hits.
BS15805.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:44:08 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 1..1428 | 17..1444 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:31:16 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..1547 | 9..1444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:37:50 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 120..1536 | 17..1433 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:44:08 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 114..1547 | 9..1444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:29 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32115-RA | 120..1536 | 17..1433 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:29 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12912051..12912995 | 489..1433 | 100 | <- | Minus |
| 3L | 12913056..12913527 | 17..488 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:37:50 Download gff for
BS15805.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12905151..12906095 | 489..1433 | 100 | <- | Minus |
| arm_3L | 12906156..12906627 | 17..488 | 100 | | Minus |
BS15805.pep Sequence
Translation from 16 to 1443
> BS15805.pep
MKTQITDINHFAFFRILDILKKNCETQHGDETEEIIKYADILNFATASFK
FTRIVRDWDIHFYTRLAIHELHVVPRRNITINLDAMYKTLNAETEEGRKH
LVNIITSIVSNPSIRRLKLNNLDAFFYEEHSSFADEILKILQLKRNSKPI
ELILNIPGREIRNLHGFRNISKLILTASIEISDLEKFCLYNPKLSTLEVN
QSHFSDHGKLAQIVPHCSNLKNLKFILDDNAWDNDYVRLSRLNRLQKLII
LLPENNENDMEIDIESHEEEEDMGMYFEEIGAVSTYTRSIPIFQLLKALH
EKEKSTLRELRLGFNIDDEMVQLISKLNELRGLECGFYDPKSVSHFVQHP
NLKRLSTLNKASIITDDYAALLEKQCTISNLDTKIIFNAKGTLSIFTEKV
DILRSGNCESFLKLKNLKKIFVPDNMIKYEKATLDRFLALGVELIDYNSA
SSGLESVSDSGPDYSFLWNHSDENK*
BS15805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:41:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32115-PA | 475 | CG32115-PA | 1..475 | 1..475 | 2442 | 100 | Plus |
| CG32107-PE | 956 | CG32107-PE | 10..252 | 2..250 | 223 | 24 | Plus |
| CG32107-PD | 980 | CG32107-PD | 10..252 | 2..250 | 223 | 24 | Plus |
